RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 MLLT3P42568 568 aaPredicted RBP11.98□□□□□ -0.49
VPS52-218ENST00000482399 MLIPQ5VWP3 458 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 ASTLQ6HA08 431 aaPredicted RBP11.98□□□□□ -0.49
VPS52-218ENST00000482399 METTL3Q86U44 580 aaKnown RBP11.98□□□□□ -0.49
VPS52-218ENST00000482399 SLC9B2Q86UD5 537 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 LAS2Q8IYD9 372 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 OR51A7Q8NH64 312 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 ZFAND1Q8TCF1 268 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 THAP7Q9BT49 309 aaPredicted RBP11.98□□□□□ -0.49
VPS52-218ENST00000482399 SLC46A2Q9BY10 475 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 NANSQ9NR45 359 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 EVA1BQ9NVM1 165 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 FKBP14Q9NWM8 211 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 RDH8Q9NYR8 311 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 MN1Q10571 1320 aaPredicted RBP11.98□□□□□ -0.49
VPS52-218ENST00000482399 HTTP42858 3142 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 A0A0B4J203 849 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 CHURC1-FNTBB4DL54 471 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 SRPRAP08240 638 aaKnown RBP11.98□□□□□ -0.49
VPS52-218ENST00000482399 PRPH2P23942 346 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 STOMP27105 288 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 SLC6A11P48066 632 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.98□□□□□ -0.49
VPS52-218ENST00000482399 CEACAM19Q7Z692 300 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 NUDT13Q86X67 352 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 OR4N5Q8IXE1 308 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 AMER3Q8N944 861 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 ADAMTS15Q8TE58 950 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 RFKQ969G6 155 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 ZG16BQ96DA0 208 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 SAMD8Q96LT4 415 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 TM7SF3Q9NS93 570 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 TANC1Q9C0D5 1861 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 MAGEB4O15481 346 aaPredicted RBP11.98□□□□□ -0.49
VPS52-218ENST00000482399 TIMP2P16035 220 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 ELK1P19419 428 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 FUT1P19526 365 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 PTGS2P35354 604 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 SLC1A3P43003 542 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 CCR6P51684 374 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 NDUFAF5Q5TEU4 345 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 PRICKLE2Q7Z3G6 844 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 OR56A3Q8NH54 315 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 CEP76Q8TAP6 659 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 OVCA2Q8WZ82 227 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 TCEAL4Q96EI5 215 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 SPATA5L1Q9BVQ7 753 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 NEUROD4Q9HD90 331 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 MYNNQ9NPC7 610 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 BRD7Q9NPI1 651 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 SRRDQ9UH36 339 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 DOCK6Q96HP0 2047 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 POM121CA8CG34 1229 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 HMGN4O00479 90 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 POU3F3P20264 500 aaPredicted RBP11.97□□□□□ -0.49
VPS52-218ENST00000482399 DDCP20711 480 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 PYCR1P32322 319 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 ACSL1P33121 698 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 OR10A3P58181 314 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 DSG2Q14126 1118 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 CLPPQ16740 277 aaPredicted RBP11.97□□□□□ -0.49
VPS52-218ENST00000482399 FAM46CQ5VWP2 391 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 KHDRBS2Q5VWX1 349 aaKnown RBP11.97□□□□□ -0.49
VPS52-218ENST00000482399 LRRTM4Q86VH4 590 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 SERPINA12Q8IW75 414 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 REM2Q8IYK8 340 aaPredicted RBP11.97□□□□□ -0.49
VPS52-218ENST00000482399 TRAM1L1Q8N609 369 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 CLDN22Q8N7P3 220 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 ADAMTS19Q8TE59 1207 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 PDXPQ96GD0 296 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 MCHR1Q99705 422 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 DPH7Q9BTV6 452 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 TAPBPLQ9BX59 468 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 CACNG6Q9BXT2 260 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 REV1Q9UBZ9 1251 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 IL36AQ9UHA7 158 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 DIMT1Q9UNQ2 313 aaKnown RBP11.97□□□□□ -0.49
VPS52-218ENST00000482399 TRAPPC4Q9Y296 219 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 TEX13CA0A0J9YWL9 993 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 WASH3PC4AMC7 463 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 PSMD9O00233 223 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 GATBO75879 557 aaKnown RBP11.97□□□□□ -0.49
VPS52-218ENST00000482399 SLC35G4P0C7Q5 338 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 ACP5P13686 325 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 KCNJ5P48544 419 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 SNRPGP62308 76 aaKnown RBP11.97□□□□□ -0.49
VPS52-218ENST00000482399 POU6F2P78424 691 aaPredicted RBP11.97□□□□□ -0.49
VPS52-218ENST00000482399 NTHL1P78549 312 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 HYAL4Q2M3T9 481 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 SIGIRRQ6IA17 410 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 RPTNQ6XPR3 784 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 IFT27Q9BW83 186 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 GSDMCQ9BYG8 508 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 CHST8Q9H2A9 424 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 PAK6Q9NQU5 681 aaPredicted RBP11.97□□□□□ -0.49
VPS52-218ENST00000482399 ACOXLQ9NUZ1 547 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 RABL2BQ9UNT1 228 aa11.97□□□□□ -0.49
VPS52-218ENST00000482399 A0A087WUU8 490 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 GTPBP1O00178 669 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms