RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 TTLL9Q3SXZ7 439 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 TAF1BQ53T94 588 aaPredicted RBP4.43□□□□□ -1.7
ZNF540-204ENST00000586792 TCTE1Q5JU00 501 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 DUS1LQ6P1R4 473 aaKnown RBP4.43□□□□□ -1.7
ZNF540-204ENST00000586792 LRRC8BQ6P9F7 803 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 SUSD1Q6UWL2 747 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 ISLR2Q6UXK2 745 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 C9orf47Q6ZRZ4 202 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 SPATA21Q7Z572 469 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 WDR53Q7Z5U6 358 aaPredicted RBP4.43□□□□□ -1.7
ZNF540-204ENST00000586792 LRRC6Q86X45 466 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 KMT5CQ86Y97 462 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 LINC00346Q8IVM7 164 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 DENND6AQ8IWF6 608 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 CLDN19Q8N6F1 224 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 ACVR1CQ8NER5 493 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 MAGEC3Q8TD91 643 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 WDR60Q8WVS4 1066 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 ASZ1Q8WWH4 475 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 LCN9Q8WX39 176 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 TFGQ92734 400 aaPredicted RBP4.43□□□□□ -1.7
ZNF540-204ENST00000586792 COQ8BQ96D53 544 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 STAMBPL1Q96FJ0 436 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 THOC3Q96J01 351 aaKnown RBP4.43□□□□□ -1.7
ZNF540-204ENST00000586792 C9orf72Q96LT7 481 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 FOPNLQ96NB1 174 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 OR6C1Q96RD1 312 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 TRIB1Q96RU8 372 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 CCNL2Q96S94 520 aaPredicted RBP4.43□□□□□ -1.7
ZNF540-204ENST00000586792 CTRCQ99895 268 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 EFHD1Q9BUP0 239 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 TUBB2BQ9BVA1 445 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 CCDC106Q9BWC9 280 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 ACTRT3Q9BYD9 372 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 ULBP3Q9BZM4 244 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 AMBRA1Q9C0C7 1298 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 B3GNT4Q9C0J1 378 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 TINAGL1Q9GZM7 467 aaPredicted RBP4.43□□□□□ -1.7
ZNF540-204ENST00000586792 RAB33BQ9H082 229 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 VCX3BQ9H321 246 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 KIR3DX1Q9H7L2 352 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 MVB12BQ9H7P6 319 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 MRM3Q9HC36 420 aaKnown RBP4.43□□□□□ -1.7
ZNF540-204ENST00000586792 CHRAC1Q9NRG0 131 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 IARS2Q9NSE4 1012 aaKnown RBP4.43□□□□□ -1.7
ZNF540-204ENST00000586792 JKAMPQ9P055 326 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 TMEM9Q9P0T7 183 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 SPATA7Q9P0W8 599 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 MDFICQ9P1T7 246 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 ATP6V1HQ9UI12 483 aa4.43□□□□□ -1.7
ZNF540-204ENST00000586792 TDRKHQ9Y2W6 561 aaKnown RBP4.43□□□□□ -1.7
ZNF540-204ENST00000586792 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.43□□□□□ -1.7
ZNF540-204ENST00000586792 A0A087WUV0 522 aaPredicted RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 LOC100653049A0A140TA62 436 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 SLC9B1P1A6NJY1 282 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 SDR42E2A6NKP2 422 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 SLC33A1O00400 549 aaPredicted RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 PRMT5O14744 637 aaPredicted RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 LSM1O15116 133 aaKnown RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 RAD1O60671 282 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 DIAPH2O60879 1101 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 KRT34O76011 436 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 ZBTB11O95625 1053 aaPredicted RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 TUBBP07437 444 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 VIMP08670 466 aaKnown RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 UBTFL6P0CB48 400 aaPredicted RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 PRSS56P0CW18 603 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 FGF3P11487 239 aaPredicted RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 CCL4P13236 92 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 POLR2CP19387 275 aaPredicted RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 CHRM3P20309 590 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 OGNP20774 298 aaKnown RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 MALP21145 153 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 GALP22466 123 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 TCEA1P23193 301 aaKnown RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 NMBRP28336 390 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 ETV5P41161 510 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 CCR10P46092 362 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 LEPRP48357 1165 aaKnown RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 HNRNPH2P55795 449 aaKnown RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 EEFSECP57772 596 aaKnown RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 TUBA1BP68363 451 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 TUBB4BP68371 445 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 ACVR1Q04771 509 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 CALCOCO2Q13137 446 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 MSLNQ13421 630 aaPredicted RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 SNTB1Q13884 538 aaKnown RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 SQLEQ14534 574 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 IL11RAQ14626 422 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 IRF3Q14653 427 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 KCNJ11Q14654 390 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 PCLAFQ15004 111 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 EFTUD2Q15029 972 aaKnown RBP eCLIP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 CYP1B1Q16678 543 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 BTBD16Q32M84 506 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 ATAD3BQ5T9A4 648 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 RIPPLY2Q5TAB7 128 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 ARHGAP40Q5TG30 622 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 ATG9BQ674R7 924 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 ZNF470Q6ECI4 717 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms