RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 SOHLH2Q9NX45 425 aa8.81□□□□□ -1
LINC00838-201ENST00000562956 TUBA8Q9NY65 449 aaPredicted RBP8.81□□□□□ -1
LINC00838-201ENST00000562956 PTGFRNQ9P2B2 879 aa8.81□□□□□ -1
LINC00838-201ENST00000562956 AASSQ9UDR5 926 aa8.81□□□□□ -1
LINC00838-201ENST00000562956 NDRG4Q9ULP0 352 aaKnown RBP8.81□□□□□ -1
LINC00838-201ENST00000562956 FCMRO60667 390 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 CRHBPP24387 322 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 RYKP34925 604 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 ALDH3B2P48448 385 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 MAT1AQ00266 395 aaKnown RBP8.8□□□□□ -1
LINC00838-201ENST00000562956 IL5RAQ01344 420 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 IL18R1Q13478 541 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 KCNAB1Q14722 419 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 SHBQ15464 509 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 C6orf141Q5SZD1 244 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 CDC73Q6P1J9 531 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 UTS2BQ765I0 119 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 CCDC71Q8IV32 467 aaPredicted RBP8.8□□□□□ -1
LINC00838-201ENST00000562956 SLC35F3Q8IY50 421 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 CNIH3Q8TBE1 160 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 ADAMTS15Q8TE58 950 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 FBLIM1Q8WUP2 373 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 CDS1Q92903 461 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 ZNF285Q96NJ3 590 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 TRNT1Q96Q11 434 aaKnown RBP8.8□□□□□ -1
LINC00838-201ENST00000562956 BTBD2Q9BX70 525 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 PLGRKTQ9HBL7 147 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 GIN1Q9NXP7 522 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 CDC14AQ9UNH5 594 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 GMPPBQ9Y5P6 360 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 SPAG17Q6Q759 2223 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 TRBV4-1A0A0J9YWV2 114 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 E9PQ18 207 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 CDC123O75794 336 aaPredicted RBP8.8□□□□□ -1
LINC00838-201ENST00000562956 CT62P0C5K7 136 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 POU2F1P14859 743 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 NT5EP21589 574 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 CTSKP43235 329 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 DHPSP49366 369 aaPredicted RBP8.8□□□□□ -1
LINC00838-201ENST00000562956 HLCSP50747 726 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 PDX1P52945 283 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 EPHA4P54764 986 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 RPP38P78345 283 aaKnown RBP8.8□□□□□ -1
LINC00838-201ENST00000562956 CFHR1Q03591 330 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 MGAT2Q10469 447 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 KEAP1Q14145 624 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 DUSP5Q16690 384 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 SYT16Q17RD7 645 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 PRICKLE4Q2TBC4 344 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 FAM214AQ32MH5 1076 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 AMZ1Q400G9 498 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 COLEC12Q5KU26 742 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 MLIPQ5VWP3 458 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 HEPHL1Q6MZM0 1159 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 C16orf87Q6PH81 154 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 Q6ZPB1 254 aaPredicted RBP8.8□□□□□ -1
LINC00838-201ENST00000562956 DGAT2L6Q6ZPD8 337 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 C16orf62Q7Z3J2 963 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 HDAC2Q92769 488 aaKnown RBP8.8□□□□□ -1
LINC00838-201ENST00000562956 ZDHHC12Q96GR4 267 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 ALPK1Q96QP1 1244 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 GABARAPL3Q9BY60 117 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 SPRTNQ9H040 489 aaPredicted RBP8.8□□□□□ -1
LINC00838-201ENST00000562956 ADAP2Q9NPF8 381 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 C19orf53Q9UNZ5 99 aaPredicted RBP8.8□□□□□ -1
LINC00838-201ENST00000562956 PLCL2Q9UPR0 1127 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 DSPPQ9NZW4 1301 aa8.8□□□□□ -1
LINC00838-201ENST00000562956 EML5Q05BV3 1969 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 IGHV1OR21-1A0A087WYE8 117 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 HYKKA2RU49 373 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 FUOMA2VDF0 154 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 NUDT21O43809 227 aaKnown RBP8.79□□□□□ -1
LINC00838-201ENST00000562956 CCNB2O95067 398 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 ZBTB11O95625 1053 aaPredicted RBP8.79□□□□□ -1
LINC00838-201ENST00000562956 ACP2P11117 423 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 ANXA8P13928 327 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 EEF1B2P24534 225 aaKnown RBP8.79□□□□□ -1
LINC00838-201ENST00000562956 CDK5R2Q13319 367 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 EXOSC7Q15024 291 aaKnown RBP8.79□□□□□ -1
LINC00838-201ENST00000562956 RBM48Q5RL73 367 aaKnown RBP8.79□□□□□ -1
LINC00838-201ENST00000562956 ATAD3BQ5T9A4 648 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 PRAMEF8Q5VWM4 474 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 PRAMEF7Q5VXH5 474 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 LYSMD4Q5XG99 296 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 MAMSTRQ6ZN01 415 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 TSPYL5Q86VY4 417 aaPredicted RBP8.79□□□□□ -1
LINC00838-201ENST00000562956 VRK2Q86Y07 508 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 ERI1Q8IV48 349 aaKnown RBP8.79□□□□□ -1
LINC00838-201ENST00000562956 METTL27Q8N6F8 245 aaPredicted RBP8.79□□□□□ -1
LINC00838-201ENST00000562956 Q8N9G6 341 aaPredicted RBP8.79□□□□□ -1
LINC00838-201ENST00000562956 ADAMTS16Q8TE57 1224 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 UBE2FQ969M7 185 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 PEX11GQ96HA9 241 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 AHCYL2Q96HN2 611 aaKnown RBP8.79□□□□□ -1
LINC00838-201ENST00000562956 IER2Q9BTL4 223 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 SPATA5L1Q9BVQ7 753 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 RAB33BQ9H082 229 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 ERVMER34-1Q9H9K5 563 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 PDE7BQ9NP56 450 aa8.79□□□□□ -1
LINC00838-201ENST00000562956 MAT2BQ9NZL9 334 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms