RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 PLPP1O14494 284 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 SDHDO14521 159 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 PCDH17O14917 1159 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 SEC22BO75396 215 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 STK17BO94768 372 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 ETHE1O95571 254 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 KLK3P07288 261 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-213ENST00000550629 RNH1P13489 461 aaKnown RBP5.39□□□□□ -1.55
SCAF11-213ENST00000550629 IDO1P14902 403 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 ITIH1P19827 911 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 ATP5A1P25705 553 aaKnown RBP5.39□□□□□ -1.55
SCAF11-213ENST00000550629 ETV5P41161 510 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 ASMTP46597 345 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 MAPK12P53778 367 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 MAPK10P53779 464 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 PLA2G16P53816 162 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 AQP5P55064 265 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 CLDN6P56747 220 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 C21orf58P58505 322 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 ERVK-8P63133 956 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 GNGT1P63211 74 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 BTN3A2P78410 334 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 BLOC1S1P78537 153 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 DCDP81605 110 aaKnown RBP5.39□□□□□ -1.55
SCAF11-213ENST00000550629 HMGCS1Q01581 520 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 KIAA0040Q15053 153 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 PDCD2Q16342 344 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-213ENST00000550629 NKAIN1Q4KMZ8 207 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 DEFB134Q4QY38 66 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 C3orf38Q5JPI3 329 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 C6orf136Q5SQH8 315 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 CCNYL2Q5T2Q4 361 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 NOXRED1Q6NXP6 359 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 Q6ZSR9 355 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 MAVSQ7Z434 540 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 PDSS2Q86YH6 399 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 DSELQ8IZU8 1212 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 ESX1Q8N693 406 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 AMER3Q8N944 861 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 ACOT4Q8N9L9 421 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 NLGN4YQ8NFZ3 816 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-213ENST00000550629 OR9A4Q8NGU2 314 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 OR2T11Q8NH01 316 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 CEP70Q8NHQ1 597 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 STARD8Q92502 1023 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 TUBGCP3Q96CW5 907 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 MTFMTQ96DP5 389 aaKnown RBP5.39□□□□□ -1.55
SCAF11-213ENST00000550629 ZNF764Q96H86 408 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-213ENST00000550629 ZNF578Q96N58 590 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-213ENST00000550629 OR1F2PQ96R84 312 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 HBEGFQ99075 208 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 CTRCQ99895 268 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 MACROD1Q9BQ69 325 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 CCDC28BQ9BUN5 200 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 ZNF717Q9BY31 904 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-213ENST00000550629 MRPL1Q9BYD6 325 aaKnown RBP5.39□□□□□ -1.55
SCAF11-213ENST00000550629 NUF2Q9BZD4 464 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 SLC7A5P2Q9GIP4 190 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 AICDAQ9GZX7 198 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 SLC26A1Q9H2B4 701 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 KLHL31Q9H511 634 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 GALNT9Q9HCQ5 603 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 ZNF304Q9HCX3 659 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 APMAPQ9HDC9 416 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 MKKSQ9NPJ1 570 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-213ENST00000550629 ASCL3Q9NQ33 180 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 LHX9Q9NQ69 397 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 STARD5Q9NSY2 213 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 C14orf105Q9NVL8 296 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 MARCOQ9UEW3 520 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-213ENST00000550629 TESQ9UGI8 421 aaKnown RBP5.39□□□□□ -1.55
SCAF11-213ENST00000550629 NXT1Q9UKK6 140 aaKnown RBP5.39□□□□□ -1.55
SCAF11-213ENST00000550629 PADI1Q9ULC6 663 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 MRPS2Q9Y399 296 aaKnown RBP5.39□□□□□ -1.55
SCAF11-213ENST00000550629 FIS1Q9Y3D6 152 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 NAALAD2Q9Y3Q0 740 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 SPACA6W5XKT8 324 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 CNOT1A5YKK6 2376 aaKnown RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 A0A0A6YYC8 382 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 GOLGA8QA0A0J9YX86 632 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 ATP6AP2A0A1C7CYW4 349 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 GNG14A0A1W2PPG7 69 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 GOLGA8OA6NCC3 632 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 TRABD2BA6NFA1 517 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 C4orf51C9J302 202 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 C9J4A7 227 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 GOLGA8NF8WBI6 632 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 I3L1I5 382 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 SAP18O00422 153 aaKnown RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 PCDH7O60245 1069 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 DIAPH2O60879 1101 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 PEX11AO75192 247 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 EEDO75530 441 aaKnown RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 SKAP2O75563 359 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 ATP6AP2O75787 350 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 KIAA0754O94854 1291 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 ZFPL1O95159 310 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 NUDT3O95989 172 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 FAM107AO95990 144 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 KLK1P06870 262 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms