RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	RAB3IL1	Q8TBN0	382 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	FAM57A	Q8TBR7	257 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	CIDEC	Q96AQ7	238 aa	Predicted RBP	11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	C11orf24	Q96F05	449 aa	Predicted RBP	11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	ZNF681	Q96N22	645 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	TREX2	Q9BQ50	279 aa	Predicted RBP	11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	TRIM8	Q9BZR9	551 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	DEPP	Q9NTK1	212 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	DDX18	Q9NVP1	670 aa	Known RBP	11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	PRODH2	Q9UF12	536 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	WBP11	Q9Y2W2	641 aa	Known RBP	11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	GOLGA8Q	A0A0J9YX86	632 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	GOLGA8O	A6NCC3	632 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	GOLGA8N	F8WBI6	632 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	PRRG2	O14669	202 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	CDC40	O60508	579 aa	Known RBP eCLIP	11.7	□□□□□ -0.54	4e-6	■■□□□ 12.3
FDPS-204	ENST00000461507	COQ9	O75208	318 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	NME6	O75414	186 aa	Predicted RBP	11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	SASH3	O75995	380 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	CLPS	P04118	112 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	COX6B1	P14854	86 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	GPX3	P22352	226 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	KRT20	P35900	424 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	RPL3	P39023	403 aa	Known RBP	11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	TMED10	P49755	219 aa	Known RBP	11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	PRKAG1	P54619	331 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	MANF	P55145	182 aa	Known RBP	11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	PPP2R2A	P63151	447 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	PLCXD2	Q0VAA5	305 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	FUT7	Q11130	342 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	MAP4K2	Q12851	820 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	MPEG1	Q2M385	716 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	HSP90B2P	Q58FF3	399 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	ZNF628	Q5EBL2	1059 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	PIGG	Q5H8A4	983 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	PRAMEF20	Q5VT98	475 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	GOLM1	Q8NBJ4	401 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	SIMC1	Q8NDZ2	872 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	SPACA9	Q96E40	222 aa	Predicted RBP	11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	CHMP6	Q96FZ7	201 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	JSRP1	Q96MG2	331 aa	Predicted RBP	11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	GLIPR2	Q9H4G4	154 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	AKTIP	Q9H8T0	292 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	ZDHHC11	Q9H8X9	412 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	EQTN	Q9NQ60	294 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	SACM1L	Q9NTJ5	587 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	RYDEN	Q9NUL5	291 aa	Known RBP	11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	INTS9	Q9NV88	658 aa	Known RBP	11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	NOP53	Q9NZM5	478 aa	Known RBP	11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	DTX4	Q9Y2E6	619 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	OTOG	Q6ZRI0	2925 aa		11.7	□□□□□ -0.54
FDPS-204	ENST00000461507	POLQ	O75417	2590 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507		A0A1B0GTH9	108 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	TRPC5OS	A6NMA1	111 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	CAPN14	A8MX76	684 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	MYO1G	B0I1T2	1018 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	NPIPB8	E9PQR5	432 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	C19orf84	I3L1E1	186 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	SCAMP2	O15127	329 aa	Known RBP	11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	CFLAR	O15519	480 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	ZNHIT1	O43257	154 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	HS6ST1	O60243	411 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	BCAS2	O75934	225 aa	Predicted RBP	11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	GLS	O94925	669 aa	Predicted RBP	11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	CBX7	O95931	251 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	G6PD	P11413	515 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	LBP	P18428	481 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	PTGS2	P35354	604 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	SOAT1	P35610	550 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	RFX3	P48380	749 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	NME5	P56597	212 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	KCNJ2	P63252	427 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	PRSS53	Q2L4Q9	553 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	HYAL4	Q2M3T9	481 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	PGS1	Q32NB8	556 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	SPDYE7P	Q495Y7	208 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	ZNF385B	Q569K4	471 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	CPTP	Q5TA50	214 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	ARHGAP11A	Q6P4F7	1023 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	RGS9BP	Q6ZS82	235 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	ZNF551	Q7Z340	670 aa	Predicted RBP	11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	CD163	Q86VB7	1156 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	MARVELD2	Q8N4S9	558 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	ZNF615	Q8N8J6	731 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	OR2M7	Q8NG81	312 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	OR7G2	Q8NG99	324 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	OR7A2P	Q8NGA2	310 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	OR10G3	Q8NGC4	313 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	ZNF675	Q8TD23	568 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	ZNF75CP	Q92670	426 aa	Predicted RBP	11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	FCRL1	Q96LA6	429 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	SGCZ	Q96LD1	299 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	AMDHD1	Q96NU7	426 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	PRPF18	Q99633	342 aa	Known RBP	11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	SH3GL2	Q99962	352 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	SPOCK3	Q9BQ16	436 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	DPY30	Q9C005	99 aa		11.69	□□□□□ -0.54
FDPS-204	ENST00000461507	ENKD1	Q9H0I2	346 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms