RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 METTL6Q8TCB7 284 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 SELENOMQ8WWX9 145 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 RAD51AP1Q96B01 352 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 PYCR2Q96C36 320 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 RHBDF1Q96CC6 855 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 COX14Q96I36 57 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 MAELQ96JY0 434 aaKnown RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 LINC00615Q96LM1 132 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 APOLD1Q96LR9 279 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 PPP3R2Q96LZ3 170 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 C12orf66Q96MD2 445 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 GUCD1Q96NT3 240 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 OR2M4Q96R27 311 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 ZBTB18Q99592 522 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 CCT7Q99832 543 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 TIMM29Q9BSF4 260 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 BTBD10Q9BSF8 475 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 RTKNQ9BST9 563 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 APOOQ9BUR5 198 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 CCDC106Q9BWC9 280 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 RAB11FIP5Q9BXF6 653 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 ATG10Q9H0Y0 220 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 LRMDAQ9H2I8 198 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 ELOVL6Q9H5J4 265 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 LMAN1LQ9HAT1 526 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 SGK2Q9HBY8 427 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 LTB4R2Q9NPC1 389 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 CD93Q9NPY3 652 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 CCDC177Q9NQR7 707 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 ITM2CQ9NQX7 267 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 MBNL1Q9NR56 388 aaKnown RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 NDE1Q9NXR1 346 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 SPATA7Q9P0W8 599 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 STOX2Q9P2F5 926 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 THEGQ9P2T0 379 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 PLEKHB1Q9UF11 243 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 CIDEBQ9UHD4 219 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 POLG2Q9UHN1 485 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 PTBP2Q9UKA9 531 aaKnown RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 SNX6Q9UNH7 406 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 PSMD13Q9UNM6 376 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 KCNK6Q9Y257 313 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 ASF1AQ9Y294 204 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 TDRKHQ9Y2W6 561 aaKnown RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 POLR3HQ9Y535 204 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 TIMM22Q9Y584 194 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 DNAJC15Q9Y5T4 150 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 DOCK7Q96N67 2140 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 TRBV5-7A0A0A0MS05 114 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 KRT87PA6NCN2 255 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 BBIP1A8MTZ0 92 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 LOC730098B7Z3J9 87 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 E7EQ34 232 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 PRAMEF26H0Y7S4 382 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 MS4A18H0YCH9 400 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 GFYI3L273 518 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 PSMD12O00232 456 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 OR7A17O14581 309 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 AIM2O14862 343 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 CHUKO15111 745 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 ANGPT2O15123 496 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 SCAMP1O15126 338 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 TAPBPO15533 448 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 KCNJ13O60928 360 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 PEX11AO75192 247 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 ZNF217O75362 1048 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 ACTL6BO94805 426 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 MYO1DO94832 1006 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 C1orf105O95561 183 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 STAMBPO95630 424 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 APBB3O95704 486 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 KRT16P08779 473 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 PCNAP12004 261 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 COX4I1P13073 169 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 IDO1P14902 403 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 IDSP22304 550 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 IMPA1P29218 277 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 PDHA2P29803 388 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 PRDX3P30048 256 aaKnown RBP3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 ACSL1P33121 698 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 GGT5P36269 586 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 NUDT1P36639 197 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 PGM1P36871 562 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 RABIFP47224 123 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 SLC6A12P48065 614 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 CLCNKAP51800 687 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 NME5P56597 212 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 CLDN2P57739 230 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 KCNK10P57789 538 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 KIAA1024LP59773 190 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 ERVPABLB-1P60509 514 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 ERVK-8P63133 956 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 KCNJ2P63252 427 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 DMPKQ09013 629 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 CHIT1Q13231 466 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 NAE1Q13564 534 aa3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 ALKBH1Q13686 389 aaKnown RBP3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 DDX39BQ13838 428 aaKnown RBP3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 CYLC2Q14093 348 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P20-201ENST00000417997 PTK2BQ14289 1009 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms