RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CD207Q9UJ71 328 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 SCML1Q9UN30 329 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 LOC100506127A0A0U1RQW1 187 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 C2CD4DB7Z1M9 353 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 TRIM77I1YAP6 450 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 TNFRSF21O75509 655 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 GCM2O75603 506 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 C1QBP02746 253 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 CYP4B1P13584 511 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 GRK5P34947 590 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 ASAH1Q13510 395 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 GCNT6Q5T4J0 391 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 UBE3DQ7Z6J8 389 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 NUDT13Q86X67 352 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 NFKBIDQ8NI38 313 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 LRRC20Q8TCA0 184 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 EXOSC8Q96B26 276 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 RGMAQ96B86 450 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 Q96MT0 163 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 NECTIN4Q96NY8 510 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 MVB12BQ9H7P6 319 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 CXorf36Q9H7Y0 433 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 KCNK12Q9HB15 430 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 SLAMF7Q9NQ25 335 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 PSORS1C1Q9UIG5 152 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 TCRBV21S2A2A0A5A6 115 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 OR7A10O76100 309 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 SEMG1P04279 462 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 PSKH1P11801 424 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 TNFRSF1BP20333 461 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 BCL6P41182 706 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 TPMTP51580 245 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 EIF2B5Q13144 721 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 HEPACAMQ14CZ8 416 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 USP30Q70CQ3 517 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 TDHQ8IZJ6 230 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 OR4E2Q8NGC2 313 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 UCN3Q969E3 161 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 TMEM80Q96HE8 168 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 OR51E2Q9H255 320 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 KLHL31Q9H511 634 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 SLC6A20Q9NP91 592 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 HCN4Q9Y3Q4 1203 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 PLXND1Q9Y4D7 1925 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 CCDC85CA6NKD9 419 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 E9PQ18 207 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 MYL9P24844 172 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 SSR2P43308 183 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 MANFP55145 182 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 RPS26P62854 115 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 CD83Q01151 205 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 SCN1BQ07699 218 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 HSPB3Q12988 150 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 SCARB2Q14108 478 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 TEAD4Q15561 434 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 TIMM50Q3ZCQ8 353 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 TRIM40Q6P9F5 258 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 OR4M1Q8NGD0 313 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 ZNF675Q8TD23 568 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 CREB3L4Q8TEY5 395 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 TEFMQ96QE5 360 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 DPH7Q9BTV6 452 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 RAB11FIP5Q9BXF6 653 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 GLTPQ9NZD2 209 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 SNX11Q9Y5W9 270 aa16.11■□□□□ 0.17
SHKBP1-205ENST00000594973 LINC00862A6NCI5 91 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 MEN1O00255 615 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 KCNJ13O60928 360 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 PDGFAP04085 211 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 CDK1P06493 297 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 PEBP1P30086 187 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 KCNJ10P78508 379 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 LRRC32Q14392 662 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 CYP27C1Q4G0S4 372 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 AMIGO1Q86WK6 493 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 P3H2Q8IVL5 708 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 CYP4Z2PQ8N1L4 340 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 SLC44A3Q8N4M1 653 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 OR2L3Q8NG85 312 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 SPPL2AQ8TCT8 520 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 HMGB4Q8WW32 186 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 APH1BQ8WW43 257 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 DNASE1L2Q92874 299 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 SCARF2Q96GP6 870 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 BMFQ96LC9 184 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 FRMD6Q96NE9 622 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 QRFPRQ96P65 431 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 GTPBP2Q9BX10 602 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 UCK2Q9BZX2 261 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 AICDAQ9GZX7 198 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 KCNN2Q9H2S1 579 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 NT5DC2Q9H857 520 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 C1GALT1Q9NS00 363 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 SAMHD1Q9Y3Z3 626 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 AUP1Q9Y679 476 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 SLC35F4A4IF30 521 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 LRIT2A6NDA9 550 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 PCDHGA12O60330 932 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 OR2B3O76000 313 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms