RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 TRIM3O75382 744 aaPredicted RBP15.37■□□□□ 0.05
USB1-211ENST00000565662 SHBGP04278 402 aa15.37■□□□□ 0.05
USB1-211ENST00000565662 CT62P0C5K7 136 aa15.37■□□□□ 0.05
USB1-211ENST00000565662 S1PR1P21453 382 aa15.37■□□□□ 0.05
USB1-211ENST00000565662 GDF1P27539 372 aa15.37■□□□□ 0.05
USB1-211ENST00000565662 SSTR2P30874 369 aa15.37■□□□□ 0.05
USB1-211ENST00000565662 PIGAP37287 484 aa15.37■□□□□ 0.05
USB1-211ENST00000565662 PSMD4P55036 377 aaKnown RBP15.37■□□□□ 0.05
USB1-211ENST00000565662 GXYLT1Q4G148 440 aa15.37■□□□□ 0.05
USB1-211ENST00000565662 PRAMEF20Q5VT98 475 aa15.37■□□□□ 0.05
USB1-211ENST00000565662 FGD2Q7Z6J4 655 aa15.37■□□□□ 0.05
USB1-211ENST00000565662 CROCCP2Q86T23 111 aa15.37■□□□□ 0.05
USB1-211ENST00000565662 EPS8L3Q8TE67 593 aaKnown RBP15.37■□□□□ 0.05
USB1-211ENST00000565662 C16orf78Q8WTQ4 265 aa15.37■□□□□ 0.05
USB1-211ENST00000565662 CNRIP1Q96F85 164 aaPredicted RBP15.37■□□□□ 0.05
USB1-211ENST00000565662 RILPQ96NA2 401 aa15.37■□□□□ 0.05
USB1-211ENST00000565662 BTBD9Q96Q07 612 aa15.37■□□□□ 0.05
USB1-211ENST00000565662 LGALS13Q9UHV8 139 aa15.37■□□□□ 0.05
USB1-211ENST00000565662 CACNA1CQ13936 2221 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 A0A0G2JMM0 328 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 ATP6AP2A0A1C7CYW4 349 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 A0A1W2PPB8 328 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 A0A1W2PRS3 328 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 CYSRT1A8MQ03 144 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 KIR3DP1A8MWS1 328 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 G3V3Y1 287 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 ADAM10O14672 748 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 NPHS1O60500 1241 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 ATP6AP2O75787 350 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 SNUPNO95149 360 aaKnown RBP15.36■□□□□ 0.05
USB1-211ENST00000565662 SLU7O95391 586 aaKnown RBP15.36■□□□□ 0.05
USB1-211ENST00000565662 COL8A1P27658 744 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 RPL3P39023 403 aaKnown RBP15.36■□□□□ 0.05
USB1-211ENST00000565662 HMGCS1Q01581 520 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 ZNHIT3Q15649 155 aaPredicted RBP15.36■□□□□ 0.05
USB1-211ENST00000565662 ZNF628Q5EBL2 1059 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 TCHHL1Q5QJ38 904 aaPredicted RBP15.36■□□□□ 0.05
USB1-211ENST00000565662 OR52R1Q8NGF1 315 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 ZFP28Q8NHY6 868 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 CAVIN3Q969G5 261 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 APIPQ96GX9 242 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 OSBPL11Q9BXB4 747 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 ITPAQ9BY32 194 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 NXF5Q9H1B4 397 aaKnown RBP15.36■□□□□ 0.05
USB1-211ENST00000565662 ANKZF1Q9H8Y5 726 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 PLLPQ9Y342 182 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 TIMM22Q9Y584 194 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 EML6Q6ZMW3 1958 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 ZNF407Q9C0G0 2248 aa15.36■□□□□ 0.05
USB1-211ENST00000565662 LRRC3CA6NJW4 275 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 AHRRA9YTQ3 701 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 AZIN1O14977 448 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 PDE9AO76083 593 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 CBX7O95931 251 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 HPNP05981 417 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 MAPK1P28482 360 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 IL12BP29460 328 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 CASP3P42574 277 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 ASMTP46597 345 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 HTR6P50406 440 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 FBXW4P57775 412 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 RAE1P78406 368 aaKnown RBP15.35■□□□□ 0.05
USB1-211ENST00000565662 MGAT2Q10469 447 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 NHSL2Q5HYW2 709 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 HIST2H2BCQ6DN03 193 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 TRABD2AQ86V40 505 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 OR1J4Q8NGS1 313 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 EXOSC8Q96B26 276 aaKnown RBP15.35■□□□□ 0.05
USB1-211ENST00000565662 OMA1Q96E52 524 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 SLC35A4Q96G79 324 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 JSRP1Q96MG2 331 aaPredicted RBP15.35■□□□□ 0.05
USB1-211ENST00000565662 C3orf14Q9HBI5 128 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 KCNJ16Q9NPI9 418 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 C1orf109Q9NX04 203 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 KLRF1Q9NZS2 232 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 C15orf41Q9Y2V0 281 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 PCNX1Q96RV3 2341 aa15.35■□□□□ 0.05
USB1-211ENST00000565662 NOTCH2Q04721 2471 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 TLDC2A0PJX2 215 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 WASHC1A8K0Z3 465 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 TMEM114B3SHH9 223 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 PLOD2O00469 737 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 ERN1O75460 977 aaKnown RBP15.34■□□□□ 0.05
USB1-211ENST00000565662 WISP2O76076 250 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 ABCB1P08183 1280 aaPredicted RBP15.34■□□□□ 0.05
USB1-211ENST00000565662 EMDP50402 254 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 CDK9P50750 372 aaKnown RBP15.34■□□□□ 0.05
USB1-211ENST00000565662 PNLIPRP2P54317 469 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 C2orf80Q0P641 193 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 SLC25A35Q3KQZ1 300 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 C1orf185Q5T7R7 199 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 RIPPLY2Q5TAB7 128 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 FAM71E1Q6IPT2 247 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 ZNF585AQ6P3V2 769 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 MCEMP1Q8IX19 187 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 CCDC116Q8IYX3 515 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 CLYBLQ8N0X4 340 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 C4orf33Q8N1A6 199 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 MREGQ8N565 214 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 NATD1Q8N6N6 113 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms