RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 TEAD2Q15562 447 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 ARHGAP11AQ6P4F7 1023 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 LRFN4Q6PJG9 635 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 PQLC3Q8N755 202 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 WDR20Q8TBZ3 569 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 C12orf57Q99622 126 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 ABCG5Q9H222 651 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 MAN2C1Q9NTJ4 1040 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 ANKMY1Q9P2S6 941 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 UBE2J1Q9Y385 318 aaPredicted RBP9.5□□□□□ -0.89
COL4A6-208ENST00000538570 ZNF541Q9H0D2 1346 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 OR6C6A6NF89 314 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 ZNF487B1APH4 448 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 PHYHO14832 338 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 VEGFDO43915 354 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 EPOP01588 193 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 CD1DP15813 335 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 CDK2P24941 298 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 CD34P28906 385 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 TPMTP51580 245 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 METTL27Q8N6F8 245 aaPredicted RBP9.5□□□□□ -0.89
COL4A6-208ENST00000538570 OR51A7Q8NH64 312 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 FAM83CQ9BQN1 747 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 RBCK1Q9BYM8 510 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 UNKLQ9H9P5 680 aaKnown RBP9.5□□□□□ -0.89
COL4A6-208ENST00000538570 A0A0A6YYH2 397 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 OTOL1A6NHN0 477 aaPredicted RBP9.49□□□□□ -0.89
COL4A6-208ENST00000538570 A6NJ64 397 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 SULT1C2O00338 296 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 TSPAN15O95858 294 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 HAPLN1P10915 354 aaPredicted RBP9.49□□□□□ -0.89
COL4A6-208ENST00000538570 CDK4P11802 303 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 KCNE1P15382 129 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 AKR1C4P17516 323 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 PROZP22891 400 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 HLA-FP30511 346 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 BMXP51813 675 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 ARHGAP1Q07960 439 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 PPA1Q15181 289 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 OSTM1Q86WC4 334 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 RELL1Q8IUW5 271 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 IGDCC3Q8IVU1 814 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 TRAM1L1Q8N609 369 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 MTMR14Q8NCE2 650 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 ABHD11Q8NFV4 315 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 NPY6RQ99463 290 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 C19orf12Q9NSK7 152 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 FAM118AQ9NWS6 357 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 HRASLS2Q9NWW9 162 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 CLDND1Q9NY35 253 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 NLKQ9UBE8 527 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 INSL6Q9Y581 213 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 A0A0U1RQF3 1178 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 SDHDO14521 159 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 BRINP1O60477 761 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 BEST1O76090 585 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 ASGR2P07307 311 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 STSP08842 583 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 PYCR1P32322 319 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 ECH1Q13011 328 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 SLAMF1Q13291 335 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 RAB11BQ15907 218 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 FAM214AQ32MH5 1076 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 TECRLQ5HYJ1 363 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 PXKQ7Z7A4 578 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 VWA5B2Q8N398 1253 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 OR52P1PQ8NH57 321 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 RHEBL1Q8TAI7 183 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 SGTBQ96EQ0 304 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 RNF39Q9H2S5 420 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 FBRSQ9HAH7 460 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 WASH6PQ9NQA3 447 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 TAS2R8Q9NYW2 309 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 PCDHGA1Q9Y5H4 931 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 PSAT1Q9Y617 370 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 HSPE1-MOB4S4R3N1 261 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 LEFTY2O00292 366 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 SCO2O43819 266 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 TYROBPO43914 113 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 RAB3DO95716 219 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 CTHP32929 405 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 NPRL3Q12980 569 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 MALLQ13021 153 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 GRB7Q14451 532 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 GTPBP8Q8N3Z3 284 aaPredicted RBP9.49□□□□□ -0.89
COL4A6-208ENST00000538570 GIMAP5Q96F15 307 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 SRA1Q9HD15 236 aaKnown RBP9.49□□□□□ -0.89
COL4A6-208ENST00000538570 MRPL15Q9P015 296 aaKnown RBP9.49□□□□□ -0.89
COL4A6-208ENST00000538570 EEF1E1-BLOC1S5C9J1V9 151 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 ATG12O94817 140 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 SOX30O94993 753 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 ADORA3P0DMS8 318 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 ADRB3P13945 408 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 ACRV1P26436 265 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 Q3ZCU0 254 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 ZDHHC1Q8WTX9 485 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 PEBP4Q96S96 227 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 NAA11Q9BSU3 229 aaPredicted RBP9.49□□□□□ -0.89
COL4A6-208ENST00000538570 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.49□□□□□ -0.89
COL4A6-208ENST00000538570 MEPEQ9NQ76 525 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms