RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 TSPY4P0CV99 314 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 TSPY8P0CW00 308 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 TSPY10P0CW01 314 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 PPIAL4FP0DN26 164 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 ALOX12P18054 663 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 GJB2P29033 226 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 MC5RP33032 325 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 GMPSP49915 693 aaPredicted RBP0.22□□□□□ -2.37
COPB1-212ENST00000534771 ACTA2P62736 377 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 ACTC1P68032 377 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 MAP2K1Q02750 393 aaPredicted RBP0.22□□□□□ -2.37
COPB1-212ENST00000534771 SRSF5Q13243 272 aaKnown RBP0.22□□□□□ -2.37
COPB1-212ENST00000534771 IL18R1Q13478 541 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 ZIC1Q15915 447 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 SYPL1Q16563 259 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 TAF9Q16594 264 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 PRSS8Q16651 343 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 UGCGQ16739 394 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 ZNF674Q2M3X9 581 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 ABCA11PQ4W5N1 156 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 DCAF12Q5T6F0 453 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 METTL11BQ5VVY1 283 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 RHBDD2Q6NTF9 364 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 ARSKQ6UWY0 536 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 C11orf57Q6ZUT1 292 aaPredicted RBP0.22□□□□□ -2.37
COPB1-212ENST00000534771 CYP4V2Q6ZWL3 525 aaPredicted RBP0.22□□□□□ -2.37
COPB1-212ENST00000534771 PRSS48Q7RTY5 328 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 NEGR1Q7Z3B1 354 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 ANKRD46Q86W74 232 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 PPP1R27Q86WC6 154 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 C17orf64Q86WR6 236 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 MEX3DQ86XN8 651 aaKnown RBP0.22□□□□□ -2.37
COPB1-212ENST00000534771 C9orf40Q8IXQ3 194 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 SMYD1Q8NB12 490 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 POGLUT1Q8NBL1 392 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 CCDC197Q8NCU1 140 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 TRPV3Q8NET8 790 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 OR2AP1Q8NGE2 309 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 RFESDQ8TAC1 157 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 TRAF3IP1Q8TDR0 691 aaPredicted RBP0.22□□□□□ -2.37
COPB1-212ENST00000534771 STARD8Q92502 1023 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 FGGYQ96C11 551 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 CAPNS2Q96L46 248 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 PRAM1Q96QH2 718 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 PSMD1Q99460 953 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 PELOQ9BRX2 385 aaKnown RBP0.22□□□□□ -2.37
COPB1-212ENST00000534771 KATNB1Q9BVA0 655 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 FUT8Q9BYC5 575 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 ULBP2Q9BZM5 246 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 TPK1Q9H3S4 243 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 NARFLQ9H6Q4 476 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 ESM1Q9NQ30 184 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 GDF3Q9NR23 364 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 ABCB8Q9NUT2 735 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 ADD3Q9UEY8 706 aaKnown RBP0.22□□□□□ -2.37
COPB1-212ENST00000534771 OPN4Q9UHM6 478 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 LCMT1Q9UIC8 334 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 NOCTQ9UK39 431 aaKnown RBP0.22□□□□□ -2.37
COPB1-212ENST00000534771 EMCNQ9ULC0 261 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 SNX7Q9UNH6 387 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 TMED7Q9Y3B3 224 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 ATG4BQ9Y4P1 393 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 OR1A2Q9Y585 309 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 TRPV2Q9Y5S1 764 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 CDH10Q9Y6N8 788 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 THSD7BQ9C0I4 1608 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 MYO16Q9Y6X6 1858 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 LTBP4Q8N2S1 1624 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 PFASO15067 1338 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 AFF2P51816 1311 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 A0A0A6YYD4 124 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 IGHV3-64DA0A0J9YX35 117 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 ATP6AP2A0A1C7CYW4 349 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 TRBC2A0A5B9 178 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 GTPBP10A4D1E9 387 aaKnown RBP0.21□□□□□ -2.38
COPB1-212ENST00000534771 DHRS7CA6NNS2 312 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 A8MUA0 341 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 MEI4A8MW99 385 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 ZNF878C9JN71 531 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 PPIP5K2O43314 1243 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 EPB41L2O43491 1005 aaKnown RBP0.21□□□□□ -2.38
COPB1-212ENST00000534771 SYT7O43581 403 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 FCGR3BO75015 233 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 NPIPB7O75200 414 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 PDE5AO76074 875 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 LETM1O95202 739 aaPredicted RBP0.21□□□□□ -2.38
COPB1-212ENST00000534771 PGLSO95336 258 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 OAS1P00973 400 aaKnown RBP0.21□□□□□ -2.38
COPB1-212ENST00000534771 GSTA2P09210 222 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 GHRP10912 638 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 PORP16435 677 aaPredicted RBP0.21□□□□□ -2.38
COPB1-212ENST00000534771 HNF1AP20823 631 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 HSPA4P34932 840 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 NF2P35240 595 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 SAA4P35542 130 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 VCPP55072 806 aaKnown RBP0.21□□□□□ -2.38
COPB1-212ENST00000534771 FKBP1BP68106 108 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 OTUD4Q01804 1114 aaKnown RBP0.21□□□□□ -2.38
COPB1-212ENST00000534771 OC90Q02509 493 aaPredicted RBP0.21□□□□□ -2.38
COPB1-212ENST00000534771 GABPAQ06546 454 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms