RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 ACAD8Q9UKU7 415 aa4.13□□□□□ -1.75
CTNND1-226ENST00000530720 SNX12Q9UMY4 172 aa4.13□□□□□ -1.75
CTNND1-226ENST00000530720 MRPS33Q9Y291 106 aaKnown RBP4.13□□□□□ -1.75
CTNND1-226ENST00000530720 MTO1Q9Y2Z2 717 aaKnown RBP4.13□□□□□ -1.75
CTNND1-226ENST00000530720 IKBKGQ9Y6K9 419 aa4.13□□□□□ -1.75
CTNND1-226ENST00000530720 CUBNO60494 3623 aa4.13□□□□□ -1.75
CTNND1-226ENST00000530720 RAI1Q7Z5J4 1906 aaPredicted RBP4.13□□□□□ -1.75
CTNND1-226ENST00000530720 DNAJC13O75165 2243 aa4.13□□□□□ -1.75
CTNND1-226ENST00000530720 NIPBLQ6KC79 2804 aaeCLIP4.13□□□□□ -1.75
CTNND1-226ENST00000530720 A0A088AWK7 358 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 A0A0A6YYD5 115 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 A0A1B0GTL3 188 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 A0A1W2PR48 441 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 ZC3H12DA2A288 527 aaKnown RBP4.12□□□□□ -1.75
CTNND1-226ENST00000530720 MBD3L4A6NDZ8 208 aaPredicted RBP4.12□□□□□ -1.75
CTNND1-226ENST00000530720 MBD3L3A6NE82 208 aaPredicted RBP4.12□□□□□ -1.75
CTNND1-226ENST00000530720 ANKDD1BA6NHY2 528 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 MBD3L5A6NJ08 208 aaPredicted RBP4.12□□□□□ -1.75
CTNND1-226ENST00000530720 CD8B2A6NJW9 211 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 CES2O00748 559 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 PLPP1O14494 284 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 H2AFYO75367 372 aaKnown RBP4.12□□□□□ -1.75
CTNND1-226ENST00000530720 SH3BGRLO75368 114 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 EEDO75530 441 aaKnown RBP4.12□□□□□ -1.75
CTNND1-226ENST00000530720 STK16O75716 305 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 EPPINO95925 133 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 HRGP04196 525 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 P04436 131 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 HPNP05981 417 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 CT62P0C5K7 136 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 SLC35E2BP0CK96 405 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 GABRA1P14867 456 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 CD53P19397 219 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 ZNF10P21506 573 aaPredicted RBP4.12□□□□□ -1.75
CTNND1-226ENST00000530720 BMP5P22003 454 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 SSTR1P30872 391 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 BSGP35613 385 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 TIMP3P35625 211 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 GNALP38405 381 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 PTGDSP41222 190 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 MSH2P43246 934 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 RPL21P46778 160 aaKnown RBP4.12□□□□□ -1.75
CTNND1-226ENST00000530720 GIPRP48546 466 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 TRPC1P48995 793 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 CDK9P50750 372 aaKnown RBP4.12□□□□□ -1.75
CTNND1-226ENST00000530720 FBXW4P57775 412 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 HERVK_113P63132 956 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 ERVK-8P63133 956 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 KCNJ2P63252 427 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 TNFRSF17Q02223 184 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 LTBQ06643 244 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 FOXF2Q12947 444 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 CHIT1Q13231 466 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 PPP1R7Q15435 360 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 PDK4Q16654 411 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 DEFB113Q30KQ7 82 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 TMEM35AQ53FP2 167 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 NHSL2Q5HYW2 709 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 CDKL4Q5MAI5 379 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 WLSQ5T9L3 541 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 KHDRBS2Q5VWX1 349 aaKnown RBP4.12□□□□□ -1.75
CTNND1-226ENST00000530720 FAM219BQ5XKK7 198 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 NSUN5P2Q63ZY6 315 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 VASNQ6EMK4 673 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 SULT1C3Q6IMI6 304 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 Q71RC1 249 aaPredicted RBP4.12□□□□□ -1.75
CTNND1-226ENST00000530720 ADGRE4PQ86SQ3 457 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 ISCA2Q86U28 154 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 PRIMA1Q86XR5 153 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 GPSM1Q86YR5 675 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 LACC1Q8IV20 430 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 ST13P4Q8IZP2 240 aaPredicted RBP4.12□□□□□ -1.75
CTNND1-226ENST00000530720 PDIK1LQ8N165 341 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 KRT78Q8N1N4 520 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 CIARTQ8N365 385 aaPredicted RBP4.12□□□□□ -1.75
CTNND1-226ENST00000530720 TCAIMQ8N3R3 496 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 ZCCHC7Q8N3Z6 543 aaKnown RBP4.12□□□□□ -1.75
CTNND1-226ENST00000530720 ZNF615Q8N8J6 731 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 C9orf106Q8NAJ2 232 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 SIMC1Q8NDZ2 872 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 FBXO36Q8NEA4 188 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 MYRIPQ8NFW9 859 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 OR7G3Q8NG95 312 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 OR5L2Q8NGL0 311 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 HUS1BQ8NHY5 278 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 MBD3L2Q8NHZ7 208 aaPredicted RBP4.12□□□□□ -1.75
CTNND1-226ENST00000530720 LINC01560Q8TB33 94 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 SPPL2AQ8TCT8 520 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 GRK7Q8WTQ7 553 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 FAM222BQ8WU58 562 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 UBTD2Q8WUN7 234 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 ADIPOR1Q96A54 375 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 LRRC39Q96DD0 335 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 WDYHV1Q96HA8 205 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 ATOH8Q96SQ7 321 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 GPR22Q99680 433 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 RBBP8Q99708 897 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 TBCDQ9BTW9 1192 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 EFCAB11Q9BUY7 163 aa4.12□□□□□ -1.75
CTNND1-226ENST00000530720 ERVK-6Q9BXR3 956 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms