RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 NTRK1P04629 796 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 ATP1B1P05026 303 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 ETFAP13804 333 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 ETS2P15036 469 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 CDH2P19022 906 aaPredicted RBP6.78□□□□□ -1.32
MRPS28-205ENST00000519386 FPR1P21462 350 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 CDH3P22223 829 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 MYF6P23409 242 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 LSSP48449 732 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 CCT3P49368 545 aaKnown RBP6.78□□□□□ -1.32
MRPS28-205ENST00000519386 NCBP2P52298 156 aaKnown RBP eCLIP6.78□□□□□ -1.32
MRPS28-205ENST00000519386 ARHGDIAP52565 204 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 CRYBA2P53672 197 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 CRISP3P54108 245 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 LIM2P55344 173 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 ARF3P61204 181 aaPredicted RBP6.78□□□□□ -1.32
MRPS28-205ENST00000519386 SHC2P98077 582 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 PPP2R2BQ00005 443 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 HSPB3Q12988 150 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 IL18R1Q13478 541 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 FAM53BQ14153 422 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 C16orf72Q14CZ0 275 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 NDUFA9Q16795 377 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 PRSS53Q2L4Q9 553 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 SLC36A3Q495N2 470 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 SPDYE7PQ495Y7 208 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 IFI44LQ53G44 452 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 CYBRD1Q53TN4 286 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 C3orf38Q5JPI3 329 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 TCTE1Q5JU00 501 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 RNFT1Q5M7Z0 435 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 COX20Q5RI15 118 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 OR2T5Q6IEZ7 315 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 TMEM71Q6P5X7 295 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 UGT2A3Q6UWM9 527 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 CEACAM20Q6UY09 585 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 FAM92BQ6ZTR7 304 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 MED25Q71SY5 747 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 TRIM73Q86UV7 250 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 PLXDC1Q8IUK5 500 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 FAM20CQ8IXL6 584 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 ST13P4Q8IZP2 240 aaPredicted RBP6.78□□□□□ -1.32
MRPS28-205ENST00000519386 MMP21Q8N119 569 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 LRRC25Q8N386 305 aaPredicted RBP6.78□□□□□ -1.32
MRPS28-205ENST00000519386 KCT2Q8NC54 265 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 OR2T29Q8NH02 315 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 BBS10Q8TAM1 723 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 PNPT1Q8TCS8 783 aaKnown RBP6.78□□□□□ -1.32
MRPS28-205ENST00000519386 ZNF675Q8TD23 568 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 NR4A3Q92570 626 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 TANKQ92844 425 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 PMM1Q92871 262 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 EXOSC8Q96B26 276 aaKnown RBP6.78□□□□□ -1.32
MRPS28-205ENST00000519386 MVB12AQ96EY5 273 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 ZDHHC12Q96GR4 267 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 LIN37Q96GY3 246 aaPredicted RBP6.78□□□□□ -1.32
MRPS28-205ENST00000519386 SLC35G5Q96KT7 338 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 C7orf34Q96L11 122 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 C10orf90Q96M02 699 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 ZNF681Q96N22 645 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 TRAPPC9Q96Q05 1148 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 ZNF607Q96SK3 696 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 MAP3K3Q99759 626 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 SLC29A1Q99808 456 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 ADI1Q9BV57 179 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 SPATA5L1Q9BVQ7 753 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 STRADBQ9C0K7 418 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 GLIPR2Q9H4G4 154 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 SYNPO2LQ9H987 977 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 BCL2L10Q9HD36 194 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 ZCCHC3Q9NUD5 404 aaKnown RBP6.78□□□□□ -1.32
MRPS28-205ENST00000519386 GIN1Q9NXP7 522 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 PTGFRNQ9P2B2 879 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 LIPT1Q9Y234 373 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 ANKRD11Q6UB99 2663 aaPredicted RBP6.78□□□□□ -1.32
MRPS28-205ENST00000519386 DMXL2Q8TDJ6 3036 aa6.78□□□□□ -1.32
MRPS28-205ENST00000519386 FREM2Q5SZK8 3169 aa6.77□□□□□ -1.32
MRPS28-205ENST00000519386 DSPPQ9NZW4 1301 aa6.77□□□□□ -1.32
MRPS28-205ENST00000519386 MAP1BP46821 2468 aaKnown RBP6.77□□□□□ -1.32
MRPS28-205ENST00000519386 URB1O60287 2271 aaKnown RBP6.77□□□□□ -1.33
MRPS28-205ENST00000519386 CCDC187A0A096LP49 1063 aa6.77□□□□□ -1.33
MRPS28-205ENST00000519386 IGHV5-51A0A0C4DH38 117 aa6.77□□□□□ -1.33
MRPS28-205ENST00000519386 C7orf72A4D263 438 aa6.77□□□□□ -1.33
MRPS28-205ENST00000519386 TRIM64A6NGJ6 449 aa6.77□□□□□ -1.33
MRPS28-205ENST00000519386 C5orf58C9J3I9 102 aa6.77□□□□□ -1.33
MRPS28-205ENST00000519386 HMGN4O00479 90 aa6.77□□□□□ -1.33
MRPS28-205ENST00000519386 GNGT2O14610 69 aa6.77□□□□□ -1.33
MRPS28-205ENST00000519386 E2F6O75461 281 aa6.77□□□□□ -1.33
MRPS28-205ENST00000519386 GCM2O75603 506 aaPredicted RBP6.77□□□□□ -1.33
MRPS28-205ENST00000519386 SERPINB7O75635 380 aa6.77□□□□□ -1.33
MRPS28-205ENST00000519386 DNAJB5O75953 348 aa6.77□□□□□ -1.33
MRPS28-205ENST00000519386 NSA2O95478 260 aaKnown RBP6.77□□□□□ -1.33
MRPS28-205ENST00000519386 ZBTB11O95625 1053 aaPredicted RBP6.77□□□□□ -1.33
MRPS28-205ENST00000519386 ALBP02768 609 aa6.77□□□□□ -1.33
MRPS28-205ENST00000519386 GUSBP08236 651 aa6.77□□□□□ -1.33
MRPS28-205ENST00000519386 TFPTP0C1Z6 253 aa6.77□□□□□ -1.33
MRPS28-205ENST00000519386 THRBP10828 461 aa6.77□□□□□ -1.33
MRPS28-205ENST00000519386 ST6GAL1P15907 406 aa6.77□□□□□ -1.33
MRPS28-205ENST00000519386 EFNA1P20827 205 aaPredicted RBP6.77□□□□□ -1.33
MRPS28-205ENST00000519386 CPN2P22792 545 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms