RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 CAPN14A8MX76 684 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 NPIPA5E9PKD4 350 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 ACOT7O00154 380 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 SCAMP2O15127 329 aaKnown RBP11.88□□□□□ -0.51
COL5A1-206ENST00000465877 AKAP10O43572 662 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 HS6ST1O60243 411 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 TBX19O60806 448 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 COQ9O75208 318 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 SEMA7AO75326 666 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 BCAS2O75934 225 aaPredicted RBP11.88□□□□□ -0.51
COL5A1-206ENST00000465877 ABCD3P28288 659 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 DNASE1L1P49184 302 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 EMDP50402 254 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 RPL14P50914 215 aaKnown RBP11.88□□□□□ -0.51
COL5A1-206ENST00000465877 FBXW4P57775 412 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 PLCXD2Q0VAA5 305 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 GTF3C1Q12789 2109 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 ZNF155Q12901 538 aaPredicted RBP11.88□□□□□ -0.51
COL5A1-206ENST00000465877 UBAP2LQ14157 1087 aaKnown RBP11.88□□□□□ -0.51
COL5A1-206ENST00000465877 C6orf136Q5SQH8 315 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 PRAMEF20Q5VT98 475 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 TMEM64Q6YI46 380 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 FAM47EQ6ZV65 393 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 CIDECQ96AQ7 238 aaPredicted RBP11.88□□□□□ -0.51
COL5A1-206ENST00000465877 ARL8AQ96BM9 186 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 PPCDCQ96CD2 204 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 TUBGCP3Q96CW5 907 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 LCORQ96JN0 433 aaPredicted RBP11.88□□□□□ -0.51
COL5A1-206ENST00000465877 PPP1R36Q96LQ0 422 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 AMDHD1Q96NU7 426 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 BTBD9Q96Q07 612 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 FAM173AQ9BQD7 235 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 TTTY12Q9BZ98 90 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 BAIAP2L1Q9UHR4 511 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 ERRFI1Q9UJM3 462 aaPredicted RBP11.88□□□□□ -0.51
COL5A1-206ENST00000465877 NPIPA1Q9UND3 350 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.88□□□□□ -0.51
COL5A1-206ENST00000465877 CHCHD2Q9Y6H1 151 aaPredicted RBP11.88□□□□□ -0.51
COL5A1-206ENST00000465877 ZNF407Q9C0G0 2248 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 NINQ8N4C6 2090 aa11.88□□□□□ -0.51
COL5A1-206ENST00000465877 SPTBN1Q01082 2364 aaKnown RBP11.87□□□□□ -0.51
COL5A1-206ENST00000465877 A0A087WV62 115 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 FRG2CA6NGY1 282 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 ACOX3O15254 700 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 PLOD3O60568 738 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 ERN1O75460 977 aaKnown RBP11.87□□□□□ -0.51
COL5A1-206ENST00000465877 WISP2O76076 250 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 RNF224P0DH78 156 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 DCAF7P61962 342 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 KCNJ2P63252 427 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 HSF1Q00613 529 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 PLGLB1Q02325 96 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 RBPJQ06330 500 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 HSPB3Q12988 150 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 MAD2L1Q13257 205 aaPredicted RBP11.87□□□□□ -0.51
COL5A1-206ENST00000465877 TTMPQ5BVD1 217 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 SLC22A10Q63ZE4 541 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 GHDCQ8N2G8 530 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 OR5M3Q8NGP4 307 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 ZFP28Q8NHY6 868 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 RAB3IL1Q8TBN0 382 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 MTERF3Q96E29 417 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 HSPBAP1Q96EW2 488 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 MAGED4Q96JG8 741 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 ATP6V1G3Q96LB4 118 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 VSTM2LQ96N03 204 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 FOLH1BQ9HBA9 442 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 DDX18Q9NVP1 670 aaKnown RBP11.87□□□□□ -0.51
COL5A1-206ENST00000465877 TUBA8Q9NY65 449 aaPredicted RBP11.87□□□□□ -0.51
COL5A1-206ENST00000465877 CNOT11Q9UKZ1 510 aaKnown RBP11.87□□□□□ -0.51
COL5A1-206ENST00000465877 SLC5A6Q9Y289 635 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 NPFFR2Q9Y5X5 522 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 FREM3P0C091 2139 aa11.87□□□□□ -0.51
COL5A1-206ENST00000465877 DIDO1Q9BTC0 2240 aaKnown RBP11.87□□□□□ -0.51
COL5A1-206ENST00000465877 FLNBO75369 2602 aaKnown RBP11.87□□□□□ -0.51
COL5A1-206ENST00000465877 NCOA6Q14686 2063 aaPredicted RBP11.87□□□□□ -0.51
COL5A1-206ENST00000465877 DNAJC13O75165 2243 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 FAM166BA8MTA8 275 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 TP53I11O14683 189 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 ASNA1O43681 348 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 SLC19A2O60779 497 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 SNNO75324 88 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-206ENST00000465877 NME6O75414 186 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-206ENST00000465877 PPM1BO75688 479 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 GLSO94925 669 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-206ENST00000465877 PSMG1O95456 288 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 STSP08842 583 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 IFI6P09912 130 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 CT45A8P0DMV1 189 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 CT45A9P0DMV2 189 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 PRPS2P11908 318 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 CNR1P21554 472 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 PIGAP37287 484 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 RPL3P39023 403 aaKnown RBP11.86□□□□□ -0.51
COL5A1-206ENST00000465877 FRKP42685 505 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-206ENST00000465877 PPICP45877 212 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 CORO7P57737 925 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 FOXO1Q12778 655 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 C4orf17Q53FE4 359 aa11.86□□□□□ -0.51
COL5A1-206ENST00000465877 KRTCAP3Q53RY4 240 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms