RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 IL2RAP01589 272 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 PTPN6P29350 595 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 HMOX2P30519 316 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 CEACAM8P31997 349 aaPredicted RBP19.22■□□□□ 0.67
VSX1-206ENST00000444511 TIMP3P35625 211 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 PEX19P40855 299 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 KIR2DL3P43628 341 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 DUSP2Q05923 314 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 CSTF3Q12996 717 aaKnown RBP19.22■□□□□ 0.67
VSX1-206ENST00000444511 LTB4RQ15722 352 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 TRMT12Q53H54 448 aaKnown RBP19.22■□□□□ 0.67
VSX1-206ENST00000444511 EIPR1Q53HC9 387 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 UNC50Q53HI1 259 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 WIPI1Q5MNZ9 446 aaPredicted RBP19.22■□□□□ 0.67
VSX1-206ENST00000444511 ZNF678Q5SXM1 525 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 FAM180BQ6P0A1 224 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 TIFABQ6ZNK6 161 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 GPRIN3Q6ZVF9 776 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 ZZZ3Q8IYH5 903 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 RELL2Q8NC24 303 aaPredicted RBP19.22■□□□□ 0.67
VSX1-206ENST00000444511 NAXEQ8NCW5 288 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 SIMC1Q8NDZ2 872 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 CTHRC1Q96CG8 243 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 CNRIP1Q96F85 164 aaPredicted RBP19.22■□□□□ 0.67
VSX1-206ENST00000444511 ZNF382Q96SR6 550 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 OSBPL11Q9BXB4 747 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 KLRF1Q9NZS2 232 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 MCM8Q9UJA3 840 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 UTS2RQ9UKP6 389 aa19.22■□□□□ 0.67
VSX1-206ENST00000444511 KDM4EB2RXH2 506 aaPredicted RBP19.21■□□□□ 0.67
VSX1-206ENST00000444511 SYT5O00445 386 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 ABHD2P08910 425 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 PCSK2P16519 638 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 BMP7P18075 431 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 GCKP35557 465 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 ASCL1P50553 236 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 RIPPLY3P57055 190 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 DCAF7P61962 342 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 MRPS35P82673 323 aaKnown RBP19.21■□□□□ 0.67
VSX1-206ENST00000444511 SNTB1Q13884 538 aaKnown RBP19.21■□□□□ 0.67
VSX1-206ENST00000444511 NHSL2Q5HYW2 709 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 DESI1Q6ICB0 168 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 SLC30A6Q6NXT4 461 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 TMEM81Q6P7N7 255 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 LCA5Q86VQ0 697 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 METTL6Q8TCB7 284 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 HGDQ93099 445 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 ABTB1Q969K4 478 aaPredicted RBP19.21■□□□□ 0.67
VSX1-206ENST00000444511 ZNF681Q96N22 645 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 TMEM237Q96Q45 408 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 TRIB1Q96RU8 372 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 NODALQ96S42 347 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 UGT2B28Q9BY64 529 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 DNAJB12Q9NXW2 375 aaKnown RBP19.21■□□□□ 0.67
VSX1-206ENST00000444511 EHD3Q9NZN3 535 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 ZNF629Q9UEG4 869 aaPredicted RBP19.21■□□□□ 0.67
VSX1-206ENST00000444511 NFU1Q9UMS0 254 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 NINQ8N4C6 2090 aa19.21■□□□□ 0.67
VSX1-206ENST00000444511 GNG14A0A1W2PPG7 69 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 PCDH7O60245 1069 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 DLX3O60479 287 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 ICOSLGO75144 302 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 ULK1O75385 1050 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 IL3P08700 152 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 CD1EP15812 388 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 CHN1P15882 459 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 DRD5P21918 477 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 ATP5F1P24539 256 aaPredicted RBP19.2■□□□□ 0.66
VSX1-206ENST00000444511 GCAP28676 217 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 SOX18P35713 384 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 PPICP45877 212 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 SNTA1Q13424 505 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 NSUN5P2Q63ZY6 315 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 TRMT10CQ7L0Y3 403 aaKnown RBP19.2■□□□□ 0.66
VSX1-206ENST00000444511 YRDCQ86U90 279 aaKnown RBP19.2■□□□□ 0.66
VSX1-206ENST00000444511 CCDC116Q8IYX3 515 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 GBP7Q8N8V2 638 aaPredicted RBP19.2■□□□□ 0.66
VSX1-206ENST00000444511 FAM83FQ8NEG4 500 aaPredicted RBP19.2■□□□□ 0.66
VSX1-206ENST00000444511 NRGNQ92686 78 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 NTNG2Q96CW9 530 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 GALNT9Q9HCQ5 603 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 HEY2Q9UBP5 337 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 DLGAP4Q9Y2H0 992 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 STK38LQ9Y2H1 464 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 CELSR1Q9NYQ6 3014 aa19.2■□□□□ 0.66
VSX1-206ENST00000444511 C2orf72A6NCS6 295 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 PRAMEF25A6NGN4 478 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 FRG2CA6NGY1 282 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 SNPHO15079 494 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 UGT2B11O75310 529 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 CTAG2O75638 210 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 BCAS2O75934 225 aaPredicted RBP19.19■□□□□ 0.66
VSX1-206ENST00000444511 RHOXF2BP0C7M4 288 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 DRD2P14416 443 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 IMPDH1P20839 514 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 DNAJA1P31689 397 aaKnown RBP19.19■□□□□ 0.66
VSX1-206ENST00000444511 EMDP50402 254 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 ART1P52961 327 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 NAGLUP54802 743 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 ACSM2AQ08AH3 577 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms