RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 OR1A2Q9Y585 309 aa3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 CEP192Q8TEP8 1941 aa3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 PLXND1Q9Y4D7 1925 aa3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 FANCMQ8IYD8 2048 aa3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 TRPM6Q9BX84 2022 aa3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 PRRC2BQ5JSZ5 2229 aaKnown RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 C17orf113A0A1B0GUU1 675 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 ATP6AP2A0A1C7CYW4 349 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 A0A1W2PQF6 199 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 KANSL1LA0AUZ9 987 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 SLC5A10A0PJK1 596 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 FAM90A18PA6NE21 464 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 FAM90A16PA6NEW6 464 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 MGAT4DA6NG13 374 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 TMEM202A6NGA9 273 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 IFITM10A6NMD0 228 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 FAM90A9PA6NNJ1 464 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 PDZK1P1A8MUH7 402 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 ARHGEF33A8MVX0 844 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 FAM90A5PA8MXJ8 464 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 SLC28A1O00337 649 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 NR5A2O00482 541 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 UBFD1O14562 309 aaKnown RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 ZNF195O14628 629 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 UBDO15205 165 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 SLC22A2O15244 555 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 SLC31A1O15431 190 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 PSIP1O75475 530 aaKnown RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 ATP6AP2O75787 350 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 POP7O75817 140 aaKnown RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 CIB2O75838 187 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 SLCO2B1O94956 709 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 CLDN9O95484 217 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 SEMA4FO95754 770 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 KRT6AP02538 564 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 LCATP04180 440 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 KRT6BP04259 564 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 CAPN1P07384 714 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 PRSS2P07478 247 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 FGF4P08620 206 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 FAM90A15PP0C7V4 464 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 FAM90A14PP0C7W9 464 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 LINC00032P0C843 101 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 THRAP10827 490 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 NQO1P15559 274 aaKnown RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 HOXB9P17482 250 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 LBPP18428 481 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 GABRG2P18507 467 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 AOC1P19801 751 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 CD72P21854 359 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 PRPH2P23942 346 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 PIK3R1P27986 724 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 GSTM2P28161 218 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 PTPN4P29074 926 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 PRDX6P30041 224 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 OXTRP30559 389 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 MAGEA9P43362 315 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 GNPDA1P46926 289 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 KRT6CP48668 564 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 NUDT2P50583 147 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 ATP4BP51164 291 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 TPMTP51580 245 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 PNLIPRP1P54315 467 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 FOXA1P55317 472 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 ZP1P60852 638 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 TBPL1P62380 186 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 RPL38P63173 70 aaKnown RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 IRX1P78414 480 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 RHAGQ02094 409 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 IRF8Q02556 426 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 TRAF3Q13114 568 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 RPA4Q13156 261 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 MAD2L1Q13257 205 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 ART3Q13508 389 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 KEAP1Q14145 624 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 NFE2L1Q14494 772 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 KRT33BQ14525 404 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 TBRG1Q3YBR2 411 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 MMEL1Q495T6 779 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 GALNTL6Q49A17 601 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 ATP6AP1LQ52LC2 224 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 CAPN13Q6MZZ7 669 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 AGTRAPQ6RW13 159 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 IL27RAQ6UWB1 636 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 SCIMPQ6UWF3 145 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 ENPP7Q6UWV6 458 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 UNC5DQ6UXZ4 953 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 CYHR1Q6ZMK1 362 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 Q6ZS52 159 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 RNF144BQ7Z419 303 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 SPATA19Q7Z5L4 167 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 TMPRSS11BQ86T26 416 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 TRIM69Q86WT6 500 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 SNX32Q86XE0 403 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 DCUN1D3Q8IWE4 304 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 KIF2BQ8N4N8 673 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 DEFB123Q8N688 67 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 FNDC5Q8NAU1 212 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 ZNF527Q8NB42 609 aa3.6□□□□□ -1.83
HMGB3P20-201ENST00000417997 OR52B6Q8NGF0 335 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms