RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 EID3Q8N140 333 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 RIBC1Q8N443 379 aaPredicted RBP16.24■□□□□ 0.19
LSM5-204ENST00000409909 OR9A2Q8NGT5 310 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 NTNG2Q96CW9 530 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 APOPT1Q96IL0 206 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 LCORQ96JN0 433 aaPredicted RBP16.24■□□□□ 0.19
LSM5-204ENST00000409909 JSRP1Q96MG2 331 aaPredicted RBP16.24■□□□□ 0.19
LSM5-204ENST00000409909 RILPQ96NA2 401 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 SECISBP2Q96T21 854 aaKnown RBP16.24■□□□□ 0.19
LSM5-204ENST00000409909 ANGPTL4Q9BY76 406 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 PFDN4Q9NQP4 134 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 EHD3Q9NZN3 535 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 SLC17A7Q9P2U7 560 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 EXO1Q9UQ84 846 aaKnown RBP16.24■□□□□ 0.19
LSM5-204ENST00000409909 CFL2Q9Y281 166 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 POLR3HQ9Y535 204 aaPredicted RBP16.24■□□□□ 0.19
LSM5-204ENST00000409909 PHF3Q92576 2039 aaKnown RBP16.23■□□□□ 0.19
LSM5-204ENST00000409909 HCN1O60741 890 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 TRIM13O60858 407 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 PPM1BO75688 479 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 SLU7O95391 586 aaKnown RBP16.23■□□□□ 0.19
LSM5-204ENST00000409909 DDCP20711 480 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 DRD5P21918 477 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 ALDH3A1P30838 453 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 CASP3P42574 277 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 PPICP45877 212 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 MAN2A2P49641 1150 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 TMED10P49755 219 aaKnown RBP16.23■□□□□ 0.19
LSM5-204ENST00000409909 ZNF763Q0D2J5 394 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 KIAA0040Q15053 153 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 TBCELQ5QJ74 424 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 FNDC7Q5VTL7 733 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 EMBQ6PCB8 327 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 SRRM1Q8IYB3 904 aaKnown RBP16.23■□□□□ 0.19
LSM5-204ENST00000409909 CDC26Q8NHZ8 85 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 CAVIN3Q969G5 261 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 SDCCAG3Q96C92 435 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 FAM111AQ96PZ2 611 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 ROPN1BQ9BZX4 212 aaPredicted RBP16.23■□□□□ 0.19
LSM5-204ENST00000409909 LDAHQ9H6V9 325 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 ROPN1Q9HAT0 212 aaPredicted RBP16.23■□□□□ 0.19
LSM5-204ENST00000409909 CHST11Q9NPF2 352 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 RRAGDQ9NQL2 400 aaPredicted RBP16.23■□□□□ 0.19
LSM5-204ENST00000409909 SPRR3Q9UBC9 169 aa16.23■□□□□ 0.19
LSM5-204ENST00000409909 GPR55Q9Y2T6 319 aaPredicted RBP16.23■□□□□ 0.19
LSM5-204ENST00000409909 TRGV5A0A0B4J1U4 118 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 MYO1GB0I1T2 1018 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 BCKDKO14874 412 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 AZIN1O14977 448 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 SPAG7O75391 227 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 RSL1D1O76021 490 aaKnown RBP16.22■□□□□ 0.19
LSM5-204ENST00000409909 CREB1P16220 341 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 NAGAP17050 411 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 KIR3DL1P43629 444 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 GSTM5P46439 218 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 IFFO1Q0D2I5 559 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 PMPCAQ10713 525 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 TMEM198Q66K66 360 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 RTL6Q6ICC9 239 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 TMEM211Q6ICI0 200 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 NOXRED1Q6NXP6 359 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 TICAM1Q8IUC6 712 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 SAMD14Q8IZD0 417 aaPredicted RBP16.22■□□□□ 0.19
LSM5-204ENST00000409909 OR7G2Q8NG99 324 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 OR2T11Q8NH01 316 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 FAM76AQ8TAV0 307 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 HGDQ93099 445 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 ERP27Q96DN0 273 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 OMA1Q96E52 524 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 HSPBAP1Q96EW2 488 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 ZNF597Q96LX8 424 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 GNRHR2Q96P88 292 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 NODALQ96S42 347 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 MECRQ9BV79 373 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 IQCGQ9H095 443 aaKnown RBP16.22■□□□□ 0.19
LSM5-204ENST00000409909 SLC6A15Q9H2J7 730 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 TUBB1Q9H4B7 451 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 ACKR4Q9NPB9 350 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 MYNNQ9NPC7 610 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 QPCTLQ9NXS2 382 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 TAS2R7Q9NYW3 318 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 PRODH2Q9UF12 536 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 MID2Q9UJV3 735 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 ACAD8Q9UKU7 415 aa16.22■□□□□ 0.19
LSM5-204ENST00000409909 CREBBPQ92793 2442 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 MYO9AB2RTY4 2548 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 TO15178 435 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 ACOX3O15254 700 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 PLOD3O60568 738 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 SEC22BO75396 215 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 SNX4O95219 450 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 CHRNGP07510 517 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 SNRPB2P08579 225 aaKnown RBP16.21■□□□□ 0.19
LSM5-204ENST00000409909 CT45A8P0DMV1 189 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 CT45A9P0DMV2 189 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 PRPH2P23942 346 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 TACR1P25103 407 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 ACVR2AP27037 513 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 MPIP34949 423 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 TRPC1P48995 793 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms