RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 SLC2A7Q6PXP3 512 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 IGFL2Q6UWQ7 119 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 SLC29A4Q7RTT9 530 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 RETREG3Q86VR2 466 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 SLC5A8Q8N695 610 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 NUP43Q8NFH3 380 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 MIPOL1Q8TD10 442 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 BRIX1Q8TDN6 353 aaKnown RBP13.08□□□□□ -0.32
VPS25-201ENST00000253794 DOK4Q8TEW6 326 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 NEURL3Q96EH8 262 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 NPAS2Q99743 824 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 INPP5KQ9BT40 448 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 LMF2Q9BU23 707 aaKnown RBP13.08□□□□□ -0.32
VPS25-201ENST00000253794 ZNF552Q9H707 407 aaPredicted RBP13.08□□□□□ -0.32
VPS25-201ENST00000253794 ANKRA2Q9H9E1 313 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 GPATCH2Q9NW75 528 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 GIN1Q9NXP7 522 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 MYOTQ9UBF9 498 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 TUBD1Q9UJT1 453 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 VPS4AQ9UN37 437 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 DTX4Q9Y2E6 619 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 GPR55Q9Y2T6 319 aaPredicted RBP13.08□□□□□ -0.32
VPS25-201ENST00000253794 PCDHGB7Q9Y5F8 929 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 MED13Q9UHV7 2174 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 C2orf92A0A1B0GVN3 265 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 FBP2O00757 339 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 ANGPT2O15123 496 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 TO15178 435 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 ACOX3O15254 700 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 SOX30O94993 753 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 CPSF4O95639 269 aaKnown RBP13.07□□□□□ -0.32
VPS25-201ENST00000253794 NPPAP01160 153 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 DRD5P21918 477 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 TRHRP34981 398 aaPredicted RBP13.07□□□□□ -0.32
VPS25-201ENST00000253794 TXNL4AP83876 142 aaKnown RBP13.07□□□□□ -0.32
VPS25-201ENST00000253794 RHDQ02161 417 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 CYLC2Q14093 348 aaPredicted RBP13.07□□□□□ -0.32
VPS25-201ENST00000253794 ACER2Q5QJU3 275 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 IRAK1BP1Q5VVH5 260 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 MFSD12Q6NUT3 480 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 DLEU7Q6UYE1 221 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 RPS19BP1Q86WX3 136 aaKnown RBP13.07□□□□□ -0.32
VPS25-201ENST00000253794 SNX32Q86XE0 403 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 SLC15A4Q8N697 577 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 FITM2Q8N6M3 262 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 CDRT4Q8N9R6 151 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 ZFP90Q8TF47 636 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 TTC9Q92623 222 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 CMTM5Q96DZ9 223 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 CRELD1Q96HD1 420 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 ZNF354BQ96LW1 612 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 SMAD5Q99717 465 aaKnown RBP13.07□□□□□ -0.32
VPS25-201ENST00000253794 RNF32Q9H0A6 362 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 FOLH1BQ9HBA9 442 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 SLC6A13Q9NSD5 602 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 ZCCHC3Q9NUD5 404 aaKnown RBP13.07□□□□□ -0.32
VPS25-201ENST00000253794 GPR83Q9NYM4 423 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 MAP10Q9P2G4 905 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 BCAP29Q9UHQ4 241 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 TEKT2Q9UIF3 430 aa13.07□□□□□ -0.32
VPS25-201ENST00000253794 RNF103-CHMP3A0A140T963 221 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 FRG2CA6NGY1 282 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 NKX2-2O95096 273 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 KCNH1O95259 989 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 NADKO95544 446 aaPredicted RBP13.06□□□□□ -0.32
VPS25-201ENST00000253794 HMGN2P05204 90 aaKnown RBP13.06□□□□□ -0.32
VPS25-201ENST00000253794 ABCB1P08183 1280 aaPredicted RBP13.06□□□□□ -0.32
VPS25-201ENST00000253794 KRT16P08779 473 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 CT45A8P0DMV1 189 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 CT45A9P0DMV2 189 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 COX4I1P13073 169 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 MAN2A2P49641 1150 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 PRIM2P49643 509 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 CCL11P51671 97 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 POLE2P56282 527 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 PSG6Q00889 435 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 MFAP5Q13361 173 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 KRT72Q14CN4 511 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 MEP1AQ16819 746 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 SPDYE7PQ495Y7 208 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 CT45A2Q5DJT8 189 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 PIGGQ5H8A4 983 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 AGAP7PQ5VUJ5 663 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 TCTN3Q6NUS6 607 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 IGFL3Q6UXB1 125 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 MSRB3Q8IXL7 192 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 FDCSPQ8NFU4 85 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 HSPBAP1Q96EW2 488 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 LCORQ96JN0 433 aaPredicted RBP13.06□□□□□ -0.32
VPS25-201ENST00000253794 AGAP4Q96P64 663 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 LMF1Q96S06 567 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 SLC35A5Q9BS91 424 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 ITPAQ9BY32 194 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 ADNPQ9H2P0 1102 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 TRIM45Q9H8W5 580 aaPredicted RBP13.06□□□□□ -0.32
VPS25-201ENST00000253794 DUSP22Q9NRW4 184 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 SLC25A37Q9NYZ2 338 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 YARS2Q9Y2Z4 477 aaKnown RBP13.06□□□□□ -0.32
VPS25-201ENST00000253794 PCDHB14Q9Y5E9 798 aa13.06□□□□□ -0.32
VPS25-201ENST00000253794 SNX8Q9Y5X2 465 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms