RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 SPIN4Q56A73 249 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 EMC4Q5J8M3 183 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 CFAP157Q5JU67 520 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 TMEM198Q66K66 360 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 TRILQ7L0X0 811 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 LRRC25Q8N386 305 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 LIX1Q8N485 282 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 RPRMLQ8N4K4 120 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 MARVELD2Q8N4S9 558 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 ZNF441Q8N8Z8 693 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 EXOSC8Q96B26 276 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 APIPQ96GX9 242 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 ITPAQ9BY32 194 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 SHCBP1LQ9BZQ2 653 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 ZNF703Q9H7S9 590 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 ALKBH4Q9NXW9 302 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 MAT2BQ9NZL9 334 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 HEY2Q9UBP5 337 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 B4GALT7Q9UBV7 327 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 ACAD8Q9UKU7 415 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 CNOT11Q9UKZ1 510 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 DTX4Q9Y2E6 619 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 DLGAP4Q9Y2H0 992 aa11.68□□□□□ -0.54
NPLOC4-213ENST00000573519 NAV2Q8IVL1 2488 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 OR14I1A6ND48 311 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 FIGNL2A6NMB9 653 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 BCKDKO14874 412 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 SPAG7O75391 227 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 GPX3P22352 226 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 GDF1P27539 372 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 TIA1P31483 386 aaKnown RBP eCLIP11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 MASP1P48740 699 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 FOXA1P55317 472 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 RPP38P78345 283 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 RAE1P78406 368 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 MRPS35P82673 323 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 DUSP2Q05923 314 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 PMPCAQ10713 525 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 MAP4K2Q12851 820 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 TRMT12Q53H54 448 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 TBCELQ5QJ74 424 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 WLSQ5T9L3 541 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 BICRALQ6AI39 1079 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 TRABD2AQ86V40 505 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 C10orf107Q8IVU9 208 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 CCDC116Q8IYX3 515 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 RIBC1Q8N443 379 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 SIMC1Q8NDZ2 872 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 OR52R1Q8NGF1 315 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 OR10Q1Q8NGQ4 319 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 RND1Q92730 232 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 ADIPOR1Q96A54 375 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 SARAFQ96BY9 339 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 CNRIP1Q96F85 164 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 ZNF597Q96LX8 424 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 NXF5Q9H1B4 397 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 PROK2Q9HC23 129 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 TNFRSF12AQ9NP84 129 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 GIMAP4Q9NUV9 329 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 OXSMQ9NWU1 459 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 LGALS13Q9UHV8 139 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 CFL2Q9Y281 166 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 PLLPQ9Y342 182 aa11.67□□□□□ -0.54
NPLOC4-213ENST00000573519 A0A1B0GVC2 190 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 LRRC3CA6NJW4 275 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 FAM90A27PA6NNH2 459 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 AQP7O14520 342 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 SUSD5O60279 629 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 TRAPPC6AO75865 159 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 ANXA4P09525 319 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 CREB1P16220 341 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 PCSK2P16519 638 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 S1PR1P21453 382 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 ACVR2AP27037 513 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 ABCD3P28288 659 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 TRPC1P48995 793 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 NUP107P57740 925 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 DNAJB13P59910 316 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 MGAT2Q10469 447 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 HEPACAMQ14CZ8 416 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 TOMM20Q15388 145 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 FRMD7Q6ZUT3 714 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 ACAD11Q709F0 780 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 GDF7Q7Z4P5 450 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 TICAM1Q8IUC6 712 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 CCDC71Q8IV32 467 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 BANPQ8N9N5 519 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 SPPL2AQ8TCT8 520 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 C16orf78Q8WTQ4 265 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 ASB5Q8WWX0 329 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 APOPT1Q96IL0 206 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 RILPQ96NA2 401 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 ROPN1BQ9BZX4 212 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 SLC6A15Q9H2J7 730 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 METTL7AQ9H8H3 244 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 ROPN1Q9HAT0 212 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 RYDENQ9NUL5 291 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 EHD3Q9NZN3 535 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 SENP1Q9P0U3 644 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 SLC17A7Q9P2U7 560 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms