RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 C4orf33Q8N1A6 199 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 PRR18Q8N4B5 295 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 CISD2Q8N5K1 135 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 C10orf53Q8N6V4 93 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 ENDOVQ8N8Q3 282 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 ZNF610Q8N9Z0 462 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 L3MBTL4Q8NA19 623 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 OR7G3Q8NG95 312 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 SLC26A7Q8TE54 656 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 UBE2E3Q969T4 207 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 CCDC126Q96EE4 140 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 MMABQ96EY8 250 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 TMEM68Q96MH6 324 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 NTMT1Q9BV86 223 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 ERVK-6Q9BXR3 956 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 MRPL1Q9BYD6 325 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 SLC26A1Q9H2B4 701 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 C12orf65Q9H3J6 166 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 ACTL8Q9H568 366 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 NOL11Q9H8H0 719 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 EXTL2Q9UBQ6 330 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 PCTPQ9UKL6 214 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 TCFL5Q9UL49 500 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 TRIM33Q9UPN9 1127 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 RPH3AQ9Y2J0 694 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 GPR55Q9Y2T6 319 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 PLLPQ9Y342 182 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 MRPS2Q9Y399 296 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 MAU2Q9Y6X3 613 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 AHCTF1Q8WYP5 2266 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 LOC400499M0QZD8 3231 aa5.91□□□□□ -1.46
ATPAF1-209ENST00000529214 IGF2RP11717 2491 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 IGLV3-12A0A075B6K2 115 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 LRIT2A6NDA9 550 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 URADA6NGE7 173 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 B9A039 149 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 C9J4A7 227 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 ANKRD65E5RJM6 399 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 H0YIV9 168 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 PPP6CO00743 305 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 RGS16O15492 202 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 PRPF4O43172 522 aaKnown RBP eCLIP5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 TYROBPO43914 113 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 CNOT3O75175 753 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 CRTAPO75718 401 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 SUPT7LO94864 414 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 CLDN9O95484 217 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 CLPTM1O96005 669 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 KRT6AP02538 564 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 KRT6BP04259 564 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 SERPIND1P05546 499 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 RPS17P08708 135 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 FURINP09958 794 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 OSMP13725 252 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 CPA3P15088 417 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 AVPR1BP47901 424 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 MTNR1BP49286 362 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 CDH13P55290 713 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 DNAJB13P59910 316 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 RAB14P61106 215 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 RPS18P62269 152 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 SRSF2Q01130 221 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 PMS2P11Q13670 270 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 HERC3Q15034 1050 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 PDCD1Q15116 288 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 SF3B4Q15427 424 aaKnown RBP eCLIP5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 ADPRMQ3LIE5 342 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 FAM69BQ5VUD6 431 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 GRHL2Q6ISB3 625 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 NIPAL1Q6NVV3 410 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 SEZ6L2Q6UXD5 910 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 MEX3BQ6ZN04 569 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 RFPL4BQ6ZWI9 263 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 RPS27LQ71UM5 84 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 PRSS41Q7RTY9 318 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 PDSS2Q86YH6 399 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 LIX1LQ8IVB5 337 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 SRRM1Q8IYB3 904 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 METTL27Q8N6F8 245 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 NATD1Q8N6N6 113 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 ZNF321PQ8N8H1 164 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 AMER3Q8N944 861 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 OR52B6Q8NGF0 335 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 OR9A4Q8NGU2 314 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 OR2Y1Q8NGV0 311 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 HUS1BQ8NHY5 278 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 WDR20Q8TBZ3 569 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 RDH11Q8TC12 318 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 STT3BQ8TCJ2 826 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 ZNF473Q8WTR7 871 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 FKBP10Q96AY3 582 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 L3HYPDHQ96EM0 354 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 PGM2Q96G03 612 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 AICDAQ9GZX7 198 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 MS4A5Q9H3V2 200 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 KLHL31Q9H511 634 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 WDR54Q9H977 334 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 ACTR8Q9H981 624 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms