RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 CNTRLQ7Z7A1 2325 aa13.89□□□□□ -0.19
RNF4-210ENST00000508235 CHD6Q8TD26 2715 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 NEURL1O76050 574 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 RASAL1O95294 804 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 CBX7O95931 251 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 SP1P08047 785 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 GPX3P22352 226 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 EPHA3P29320 983 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 FRKP42685 505 aaPredicted RBP13.88□□□□□ -0.19
RNF4-210ENST00000508235 TMED10P49755 219 aaKnown RBP13.88□□□□□ -0.19
RNF4-210ENST00000508235 CLNS1AP54105 237 aaKnown RBP13.88□□□□□ -0.19
RNF4-210ENST00000508235 TLE1Q04724 770 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 EXOSC7Q15024 291 aaKnown RBP13.88□□□□□ -0.19
RNF4-210ENST00000508235 MLC1Q15049 377 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 INPP5JQ15735 1006 aaPredicted RBP13.88□□□□□ -0.19
RNF4-210ENST00000508235 PRSS53Q2L4Q9 553 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 COLEC12Q5KU26 742 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 NXNQ6DKJ4 435 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 SLC25A25Q6KCM7 469 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 FAM180AQ6UWF9 173 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 C16orf47Q6ZP98 133 aaPredicted RBP13.88□□□□□ -0.19
RNF4-210ENST00000508235 RTL4Q6ZR62 310 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 ACAD11Q709F0 780 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 CAMKMTQ7Z624 323 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 GOLM1Q8NBJ4 401 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 CEP70Q8NHQ1 597 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 CPT1CQ8TCG5 803 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 ACTRT2Q8TDY3 377 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 KAT2AQ92830 837 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 COQ8BQ96D53 544 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 SCMH1Q96GD3 660 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 SIGLEC12Q96PQ1 595 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 BHLHE41Q9C0J9 482 aaPredicted RBP13.88□□□□□ -0.19
RNF4-210ENST00000508235 WDR55Q9H6Y2 383 aaPredicted RBP13.88□□□□□ -0.19
RNF4-210ENST00000508235 SLCO1B3Q9NPD5 702 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 TIMMDC1Q9NPL8 285 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 AGPAT4Q9NRZ5 378 aa13.88□□□□□ -0.19
RNF4-210ENST00000508235 DDX18Q9NVP1 670 aaKnown RBP13.88□□□□□ -0.19
RNF4-210ENST00000508235 KLF13Q9Y2Y9 288 aaPredicted RBP13.88□□□□□ -0.19
RNF4-210ENST00000508235 COPG1Q9Y678 874 aaKnown RBP13.88□□□□□ -0.19
RNF4-210ENST00000508235 GOLGA8QA0A0J9YX86 632 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 GOLGA8OA6NCC3 632 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 GOLGA8NF8WBI6 632 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 ACOX3O15254 700 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 NME2P1O60361 137 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 DIAPH2O60879 1101 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 CRYABP02511 175 aaKnown RBP13.87□□□□□ -0.19
RNF4-210ENST00000508235 IDO1P14902 403 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 DRD5P21918 477 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 NME2P22392 152 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 PTGER1P34995 402 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 SOX3P41225 446 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 EMDP50402 254 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 NR0B1P51843 470 aaKnown RBP13.87□□□□□ -0.19
RNF4-210ENST00000508235 DIO3P55073 304 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 HSPB3Q12988 150 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 RPS6KA2Q15349 733 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 MAPKAPK3Q16644 382 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 DPY19L1Q2PZI1 675 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 LSM12Q3MHD2 195 aaKnown RBP13.87□□□□□ -0.19
RNF4-210ENST00000508235 ZNF385BQ569K4 471 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 ZNF468Q5VIY5 522 aaPredicted RBP13.87□□□□□ -0.19
RNF4-210ENST00000508235 TMEM107Q6UX40 140 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 IL20RBQ6UXL0 311 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 RIMKLAQ8IXN7 391 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 OR2L13Q8N349 312 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 ZNF441Q8N8Z8 693 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 OR7G2Q8NG99 324 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 OR7A2PQ8NGA2 310 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 ADIPOR1Q96A54 375 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 CIDECQ96AQ7 238 aaPredicted RBP13.87□□□□□ -0.19
RNF4-210ENST00000508235 SPACA9Q96E40 222 aaPredicted RBP13.87□□□□□ -0.19
RNF4-210ENST00000508235 ELP4Q96EB1 424 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 HSPBAP1Q96EW2 488 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 AIG1Q9NVV5 245 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 MAP10Q9P2G4 905 aa13.87□□□□□ -0.19
RNF4-210ENST00000508235 C19orf53Q9UNZ5 99 aaPredicted RBP13.87□□□□□ -0.19
RNF4-210ENST00000508235 A0A1W2PRB8 838 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 KLRC4-KLRK1H3BQV0 150 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 DYNC1I1O14576 645 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 ZNF195O14628 629 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 OR6B1O95007 311 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 NADKO95544 446 aaPredicted RBP13.86□□□□□ -0.19
RNF4-210ENST00000508235 LAMP1P11279 417 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 SOX18P35713 384 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 MC3RP41968 323 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 PPICP45877 212 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 MLLT10P55197 1068 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 SRSF11Q05519 484 aaKnown RBP13.86□□□□□ -0.19
RNF4-210ENST00000508235 GSTA3Q16772 222 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 SLC9B1Q4ZJI4 515 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 FHL5Q5TD97 284 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 EPGNQ6UW88 154 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 FAM47EQ6ZV65 393 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 ZNF551Q7Z340 670 aaPredicted RBP13.86□□□□□ -0.19
RNF4-210ENST00000508235 CISD2Q8N5K1 135 aaKnown RBP13.86□□□□□ -0.19
RNF4-210ENST00000508235 KRTCAP2Q8N6L1 136 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 BCORP1Q8N888 145 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 VPS37AQ8NEZ2 397 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 DNAJB8Q8NHS0 232 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms