RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ZNF787Q6DD87 383 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 MTFR2Q6P444 385 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 RGS9BPQ6ZS82 235 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 NCCRP1Q6ZVX7 275 aaPredicted RBP11.87□□□□□ -0.51
HDAC1-209ENST00000484305 MRGPRGQ86SM5 289 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 SLC22A16Q86VW1 577 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 DND1Q8IYX4 353 aaKnown RBP11.87□□□□□ -0.51
HDAC1-209ENST00000484305 FBXW8Q8N3Y1 598 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 MREGQ8N565 214 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 TMEM251Q8N6I4 163 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 C17orf47Q8NEP4 570 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 FAM57AQ8TBR7 257 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 TCP10LQ8TDR4 215 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 EXOSC8Q96B26 276 aaKnown RBP11.87□□□□□ -0.51
HDAC1-209ENST00000484305 NXF5Q9H1B4 397 aaKnown RBP11.87□□□□□ -0.51
HDAC1-209ENST00000484305 IL1RL2Q9HB29 575 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 PFDN4Q9NQP4 134 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 CNIH4Q9P003 139 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 BCAP29Q9UHQ4 241 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 CNOT11Q9UKZ1 510 aaKnown RBP11.87□□□□□ -0.51
HDAC1-209ENST00000484305 MEMO1Q9Y316 297 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 FIS1Q9Y3D6 152 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 POLR3HQ9Y535 204 aaPredicted RBP11.87□□□□□ -0.51
HDAC1-209ENST00000484305 HRH3Q9Y5N1 445 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.87□□□□□ -0.51
HDAC1-209ENST00000484305 UNC79Q9P2D8 2635 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 PRRG2O14669 202 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 ADAM10O14672 748 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 AZIN1O14977 448 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 RSL1D1O76021 490 aaKnown RBP11.86□□□□□ -0.51
HDAC1-209ENST00000484305 TPOP07202 933 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 RFPL3SP0C7P2 107 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 EMDP50402 254 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 KCNJ2P63252 427 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 C2orf80Q0P641 193 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 NNATQ16517 81 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 HYAL4Q2M3T9 481 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 ZNF628Q5EBL2 1059 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 ARHGAP11AQ6P4F7 1023 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 CD163Q86VB7 1156 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 PRR22Q8IZ63 422 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 ZNF808Q8N4W9 903 aaPredicted RBP11.86□□□□□ -0.51
HDAC1-209ENST00000484305 OR52R1Q8NGF1 315 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 CDC26Q8NHZ8 85 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.86□□□□□ -0.51
HDAC1-209ENST00000484305 KAT2AQ92830 837 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 SMC6Q96SB8 1091 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 TMEM109Q9BVC6 243 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 ITPAQ9BY32 194 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 ANKRA2Q9H9E1 313 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 RRAGDQ9NQL2 400 aaPredicted RBP11.86□□□□□ -0.51
HDAC1-209ENST00000484305 SLC35C2Q9NQQ7 365 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 RYDENQ9NUL5 291 aaKnown RBP11.86□□□□□ -0.51
HDAC1-209ENST00000484305 EHD3Q9NZN3 535 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 LIPGQ9Y5X9 500 aa11.86□□□□□ -0.51
HDAC1-209ENST00000484305 CENPEQ02224 2701 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 CACNA1CQ13936 2221 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 ATP6AP2A0A1C7CYW4 349 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 LRRC3CA6NJW4 275 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 CAPN14A8MX76 684 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 E9PLN8 166 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 TP53I11O14683 189 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 SEC22BO75396 215 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 NME6O75414 186 aaPredicted RBP11.85□□□□□ -0.51
HDAC1-209ENST00000484305 ATP6AP2O75787 350 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 IGHG3P01860 377 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 CHRNGP07510 517 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 DDCP20711 480 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 ABCD3P28288 659 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 GSTM5P46439 218 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 NRG3P56975 720 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 ZNF844Q08AG5 666 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 KIAA0040Q15053 153 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 RPS6KA2Q15349 733 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 CDSNQ15517 529 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 CEBPEQ15744 281 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 EMC4Q5J8M3 183 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 KANK2Q63ZY3 851 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 BICRALQ6AI39 1079 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 FAM71E1Q6IPT2 247 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 NOXRED1Q6NXP6 359 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 PAOXQ6QHF9 649 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 RPTNQ6XPR3 784 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 Q6ZSR9 355 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 ZCCHC23Q6ZST2 131 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 TICAM1Q8IUC6 712 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 SAMD14Q8IZD0 417 aaPredicted RBP11.85□□□□□ -0.51
HDAC1-209ENST00000484305 FAM109AQ8N4B1 249 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 OR9A2Q8NGT5 310 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 OR2T11Q8NH01 316 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 FAM76AQ8TAV0 307 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 SPPL2AQ8TCT8 520 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 ZNF675Q8TD23 568 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 DIO2Q92813 273 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 EGLN2Q96KS0 407 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 DMRTA2Q96SC8 542 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 VKORC1Q9BQB6 163 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 TRMOQ9BU70 441 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 TUBB1Q9H4B7 451 aa11.85□□□□□ -0.51
HDAC1-209ENST00000484305 MYNNQ9NPC7 610 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms