RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 IL22Q9GZX6 179 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 PCBD2Q9H0N5 130 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 DPEP2Q9H4A9 486 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ARMC7Q9H6L4 198 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 TMEM185BQ9H7F4 350 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 KIR3DX1Q9H7L2 352 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 MKKSQ9NPJ1 570 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 IMPAD1Q9NX62 359 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ZDHHC7Q9NXF8 308 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 TAS2R9Q9NYW1 312 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 MIOXQ9UGB7 285 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 MLXQ9UH92 298 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 TUBD1Q9UJT1 453 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 HSF4Q9ULV5 492 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 SLC22A13Q9Y226 551 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 SNX24Q9Y343 169 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ADAM18Q9Y3Q7 739 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 PCDHA9Q9Y5H5 950 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 ALG5Q9Y673 324 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 METP08581 1390 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 CASZ1Q86V15 1759 aa4.47□□□□□ -1.69
HMGB3P9-201ENST00000441799 SPATA31A5Q5VU36 1347 aa4.46□□□□□ -1.69
HMGB3P9-201ENST00000441799 SPATA31A7Q8IWB4 1347 aa4.46□□□□□ -1.69
HMGB3P9-201ENST00000441799 NCAPD2Q15021 1401 aa4.46□□□□□ -1.69
HMGB3P9-201ENST00000441799 ATP10DQ9P241 1426 aa4.46□□□□□ -1.69
HMGB3P9-201ENST00000441799 TNS1Q9HBL0 1735 aaKnown RBP4.46□□□□□ -1.69
HMGB3P9-201ENST00000441799 FLT4P35916 1363 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 FAM240BA0A1B0GVZ2 78 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 LNP1A1A4G5 178 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 PRAMEF22A3QJZ6 481 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 FABP12A6NFH5 140 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 TMEM191CA6NGB0 347 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 LIPT2A6NK58 231 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 USP27XA6NNY8 438 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 LEUTXA8MZ59 168 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 MCIDASD6RGH6 385 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 NPIPA7E9PJI5 369 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 POC1B-GALNT4F8VUJ3 575 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 H3BMM5 538 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 H3BQ06 376 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 TMEM189-UBE2V1I3L0A0 370 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 PRMT5O14744 637 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 ZNF185O15231 689 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 CHADO15335 359 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 CFLARO15519 480 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 MSI1O43347 362 aaKnown RBP4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 DCXO43602 365 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 KLK8O60259 260 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 SRP72O76094 671 aaKnown RBP4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 B3GAT3O94766 335 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 BRI3O95415 125 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 RAF1P04049 648 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 ELFN1P0C7U0 828 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 NPIPA8P0DM63 369 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 PPP3CBP16298 524 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 FBLP22087 321 aaKnown RBP4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 GLRA1P23415 457 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 CYP2F1P24903 491 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 PAX6P26367 422 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 CD27P26842 260 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 C21orf33P30042 268 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 PRDX5P30044 214 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 ECHS1P30084 290 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 SDHAP31040 664 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 HNRNPH3P31942 346 aaKnown RBP4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 SOAT1P35610 550 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 BSGP35613 385 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 GABRA4P48169 554 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 NRIP1P48552 1158 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 ARRB1P49407 418 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 SERPINH1P50454 418 aaKnown RBP4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 AKR1D1P51857 326 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 NDST1P52848 882 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 SLC16A1P53985 500 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 UCP2P55851 309 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 C21orf59P57076 290 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 RPS7P62081 194 aaKnown RBP4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 RPS15P62841 145 aaKnown RBP4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 FOLH1Q04609 750 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 FOXM1Q08050 763 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 BST1Q10588 318 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 CAMK1Q14012 370 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 TFDP2Q14188 446 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 PTPRCAPQ14761 206 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 GRK1Q15835 563 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 PCK2Q16822 640 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 IMPG1Q17R60 797 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 C18orf21Q32NC0 220 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 PTCHD3Q3KNS1 767 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 UGT3A2Q3SY77 523 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 PAN3Q58A45 887 aaKnown RBP4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 XKR6Q5GH73 641 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 BROXQ5VW32 411 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 MBNL2Q5VZF2 373 aaKnown RBP4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 TIGD3Q6B0B8 471 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 XKRXQ6PP77 449 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 NHLRC1Q6VVB1 395 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 GDPD4Q6W3E5 623 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 SYT13Q7L8C5 426 aa4.46□□□□□ -1.7
HMGB3P9-201ENST00000441799 ISCA2Q86U28 154 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms