RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 COL21A1Q96P44 957 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 TREX2Q9BQ50 279 aaPredicted RBP20.66■□□□□ 0.9
VSX1-205ENST00000429762 NDC1Q9BTX1 674 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 ACTRT3Q9BYD9 372 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 SERTAD3Q9UJW9 196 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 AP4B1Q9Y6B7 739 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 RASAL1O95294 804 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 GCGRP47871 477 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 SQSTM1Q13501 440 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 DUSP7Q16829 419 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 TLDC1Q6P9B6 456 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 ARHGAP22Q7Z5H3 698 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 STK32CQ86UX6 486 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 LGI4Q8N135 537 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 MIPOL1Q8TD10 442 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 MAGEE2Q8TD90 523 aaPredicted RBP20.66■□□□□ 0.9
VSX1-205ENST00000429762 CDS1Q92903 461 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 C7orf34Q96L11 122 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 ZNF597Q96LX8 424 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 PTGFRNQ9P2B2 879 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 MRPS33Q9Y291 106 aaKnown RBP20.66■□□□□ 0.9
VSX1-205ENST00000429762 CLDN16Q9Y5I7 305 aa20.66■□□□□ 0.9
VSX1-205ENST00000429762 TMEM247A6NEH6 219 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 H0YIG0 161 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 HRKO00198 91 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 ACP2P11117 423 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 IQCCQ4KMZ1 466 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 IFI44LQ53G44 452 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 PHF19Q5T6S3 580 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 NIPAL1Q6NVV3 410 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 ZNF595Q8IYB9 648 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 GPR32P1Q8NGA4 272 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 BARD1Q99728 777 aaKnown RBP20.65■□□□□ 0.9
VSX1-205ENST00000429762 ALOXE3Q9BYJ1 711 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 QRSL1Q9H0R6 528 aaKnown RBP20.65■□□□□ 0.9
VSX1-205ENST00000429762 NECTIN3Q9NQS3 549 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 NTMQ9P121 344 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 ZNF639Q9UID6 485 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 C19orf53Q9UNZ5 99 aaPredicted RBP20.65■□□□□ 0.9
VSX1-205ENST00000429762 GPR179Q6PRD1 2367 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 LNP1A1A4G5 178 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 DLGAP1O14490 977 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 CTNSO60931 367 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 E2F6O75461 281 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 SLC35E2P0CK97 266 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 CD247P20963 164 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 EMP3P54852 163 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 DUSP8Q13202 625 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 GK3PQ14409 553 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 POP5Q969H6 163 aaKnown RBP20.65■□□□□ 0.9
VSX1-205ENST00000429762 BTBD9Q96Q07 612 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 OR6C1Q96RD1 312 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 DPYSL5Q9BPU6 564 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 SMURF2Q9HAU4 748 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 FANCEQ9HB96 536 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 C11orf16Q9NQ32 467 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 SH3GLB1Q9Y371 365 aa20.65■□□□□ 0.9
VSX1-205ENST00000429762 MFN2O95140 757 aa20.64■□□□□ 0.89
VSX1-205ENST00000429762 TIAF1O95411 115 aa20.64■□□□□ 0.89
VSX1-205ENST00000429762 H6PDO95479 791 aa20.64■□□□□ 0.89
VSX1-205ENST00000429762 RECKO95980 971 aa20.64■□□□□ 0.89
VSX1-205ENST00000429762 PRKACGP22612 351 aa20.64■□□□□ 0.89
VSX1-205ENST00000429762 ANXA11P50995 505 aaKnown RBP20.64■□□□□ 0.89
VSX1-205ENST00000429762 DUSP5Q16690 384 aa20.64■□□□□ 0.89
VSX1-205ENST00000429762 MFSD4BQ5TF39 518 aa20.64■□□□□ 0.89
VSX1-205ENST00000429762 OR2T5Q6IEZ7 315 aa20.64■□□□□ 0.89
VSX1-205ENST00000429762 CDC73Q6P1J9 531 aa20.64■□□□□ 0.89
VSX1-205ENST00000429762 ISLR2Q6UXK2 745 aa20.64■□□□□ 0.89
VSX1-205ENST00000429762 OR2T29Q8NH02 315 aa20.64■□□□□ 0.89
VSX1-205ENST00000429762 ADAMTS15Q8TE58 950 aa20.64■□□□□ 0.89
VSX1-205ENST00000429762 LZICQ8WZA0 190 aa20.64■□□□□ 0.89
VSX1-205ENST00000429762 CNDP2Q96KP4 475 aaKnown RBP20.64■□□□□ 0.89
VSX1-205ENST00000429762 THUMPD1Q9NXG2 353 aaKnown RBP20.64■□□□□ 0.89
VSX1-205ENST00000429762 BAG5Q9UL15 447 aa20.64■□□□□ 0.89
VSX1-205ENST00000429762 PCDHGB5Q9Y5G0 923 aa20.64■□□□□ 0.89
VSX1-205ENST00000429762 FER1L5A0AVI2 2057 aa20.64■□□□□ 0.89
VSX1-205ENST00000429762 G3V2T6 193 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 IFNA14P01570 189 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 DCTP40126 519 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 FOXD4Q12950 439 aaPredicted RBP20.63■□□□□ 0.89
VSX1-205ENST00000429762 COMTD1Q86VU5 262 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 ARMC8Q8IUR7 673 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 PRSS58Q8IYP2 241 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 OR52R1Q8NGF1 315 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 GFM1Q96RP9 751 aaKnown RBP20.63■□□□□ 0.89
VSX1-205ENST00000429762 LANCL2Q9NS86 450 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 DNAAF2Q9NVR5 837 aaKnown RBP20.63■□□□□ 0.89
VSX1-205ENST00000429762 PDP2Q9P2J9 529 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 J3KTA2 159 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 CLDN4O14493 209 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 DSCR3O14972 297 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 TOX3O15405 576 aaPredicted RBP20.63■□□□□ 0.89
VSX1-205ENST00000429762 CBX7O95931 251 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 ANKRD34CP0C6C1 535 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 FBLP22087 321 aaKnown RBP20.63■□□□□ 0.89
VSX1-205ENST00000429762 CRISP3P54108 245 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 FOXL2P58012 376 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 SF3A2Q15428 464 aaKnown RBP20.63■□□□□ 0.89
VSX1-205ENST00000429762 C16orf62Q7Z3J2 963 aa20.63■□□□□ 0.89
VSX1-205ENST00000429762 B3GNT8Q7Z7M8 397 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms