RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 H7BY64 318 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 SYN3O14994 580 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 TSPEARQ8WU66 669 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 HAS1Q92839 578 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 PRAP1Q96NZ9 151 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 TCEAL2Q9H3H9 227 aaPredicted RBP15.69■□□□□ 0.1
PTCH1-201ENST00000331920 KCNMB3Q9NPA1 279 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 HCN4Q9Y3Q4 1203 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 UCHL1P09936 223 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 ECM1Q16610 540 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 SLC18B1Q6NT16 456 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 SGPP2Q8IWX5 399 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 SORCS1Q8WY21 1168 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 SENP5Q96HI0 755 aaPredicted RBP15.69■□□□□ 0.1
PTCH1-201ENST00000331920 PRDM15P57071 1507 aaPredicted RBP15.69■□□□□ 0.1
PTCH1-201ENST00000331920 EDDM13A0A1B0GTR0 161 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 LRRTM2O43300 516 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 ABCB7O75027 752 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 LCATP04180 440 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 ACTA2P62736 377 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 ACTG2P63267 376 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 FJX1Q86VR8 437 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 MAP3K3Q99759 626 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 ABCC3O15438 1527 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 AQP12BA6NM10 295 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 ACOT7O00154 380 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 ZNF43P17038 809 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 RPL13AP40429 203 aaKnown RBP15.69■□□□□ 0.1
PTCH1-201ENST00000331920 SLC16A10Q8TF71 515 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 PRR11Q96HE9 360 aaPredicted RBP15.69■□□□□ 0.1
PTCH1-201ENST00000331920 MYH14Q7Z406 1995 aaKnown RBP15.68■□□□□ 0.1
PTCH1-201ENST00000331920 NPIPA7E9PJI5 369 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 NPIPA8P0DM63 369 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 PYCR1P32322 319 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 ZNF181Q2M3W8 571 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 BAIAP2L2Q6UXY1 529 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 RDH10Q8IZV5 341 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 HHIPL1Q96JK4 782 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 PIGBOS1A0A0B4J2F0 54 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 CD300LBA8K4G0 201 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 PAHP00439 452 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 DBHP09172 617 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 CREB1P16220 341 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 L1CAMP32004 1257 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 RAB5CP51148 216 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 FIGNL1Q6PIW4 674 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 NATD1Q8N6N6 113 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 BIRC7Q96CA5 298 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 CNN2Q99439 309 aaKnown RBP15.68■□□□□ 0.1
PTCH1-201ENST00000331920 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.68■□□□□ 0.1
PTCH1-201ENST00000331920 ZNF334Q9HCZ1 680 aaPredicted RBP15.68■□□□□ 0.1
PTCH1-201ENST00000331920 TCAPO15273 167 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 SYT7O43581 403 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 GCH1P30793 250 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 MMP14P50281 582 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 HORMAD2Q8N7B1 307 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 ISOC1Q96CN7 298 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 DDIT4LQ96D03 193 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 LRCH3Q96II8 777 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 FAM71F1Q96KD3 344 aaPredicted RBP15.68■□□□□ 0.1
PTCH1-201ENST00000331920 TECPR2O15040 1411 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 CHRNA1P02708 482 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 VEGFCP49767 419 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 MVKQ03426 396 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 NCCRP1Q6ZVX7 275 aaPredicted RBP15.68■□□□□ 0.1
PTCH1-201ENST00000331920 DIO2Q92813 273 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 SPTSSAQ969W0 71 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 ACBD6Q9BR61 282 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 TFP02787 698 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 TIMP2P16035 220 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 HTR7P34969 479 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 RNASE10Q5GAN6 216 aaKnown RBP15.68■□□□□ 0.1
PTCH1-201ENST00000331920 SLC27A4Q6P1M0 643 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 CDHR3Q6ZTQ4 885 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 OR9I1Q8NGQ6 314 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 ELF4Q99607 663 aaPredicted RBP15.68■□□□□ 0.1
PTCH1-201ENST00000331920 GKN1Q9NS71 199 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 TRPM1Q7Z4N2 1603 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 NUDT21O43809 227 aaKnown RBP15.68■□□□□ 0.1
PTCH1-201ENST00000331920 PTGER4P35408 488 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 KCNJ11Q14654 390 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 NANOS1Q8WY41 292 aaKnown RBP15.68■□□□□ 0.1
PTCH1-201ENST00000331920 HRH4Q9H3N8 390 aa15.68■□□□□ 0.1
PTCH1-201ENST00000331920 SPATA6Q9NWH7 488 aaPredicted RBP15.68■□□□□ 0.1
PTCH1-201ENST00000331920 UPK3BL1B0FP48 263 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 UPK3BL2E5RIL1 263 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 PTAFRP25105 342 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 HNRNPFP52597 415 aaKnown RBP15.67■□□□□ 0.1
PTCH1-201ENST00000331920 GDF10P55107 478 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 RGMBQ6NW40 437 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 MRPL21Q7Z2W9 205 aaKnown RBP15.67■□□□□ 0.1
PTCH1-201ENST00000331920 C6orf120Q7Z4R8 191 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 SLC38A1Q9H2H9 487 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 PDZD7Q9H5P4 517 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 OPA3Q9H6K4 179 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 PAK1IP1Q9NWT1 392 aaPredicted RBP15.67■□□□□ 0.1
PTCH1-201ENST00000331920 MRPL22Q9NWU5 206 aaKnown RBP15.67■□□□□ 0.1
PTCH1-201ENST00000331920 TMED5Q9Y3A6 229 aa15.67■□□□□ 0.1
PTCH1-201ENST00000331920 FOXD2O60548 495 aaPredicted RBP15.67■□□□□ 0.1
PTCH1-201ENST00000331920 OR9A1PQ8NGU1 263 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms