RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 BNIP3Q12983 259 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 TOP3AQ13472 1001 aaPredicted RBP9.37□□□□□ -0.91
PTPN2-210ENST00000591115 KEAP1Q14145 624 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 SF3A2Q15428 464 aaKnown RBP9.37□□□□□ -0.91
PTPN2-210ENST00000591115 DEFB133Q30KQ1 61 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 RBM48Q5RL73 367 aaKnown RBP9.37□□□□□ -0.91
PTPN2-210ENST00000591115 CYP4Z1Q86W10 505 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 C17orf82Q86X59 251 aaPredicted RBP9.37□□□□□ -0.91
PTPN2-210ENST00000591115 KRT73Q86Y46 540 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 GATAD2AQ86YP4 633 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 OFCC1Q8IZS5 231 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 SETD9Q8NE22 299 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 BBS10Q8TAM1 723 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 KLHL6Q8WZ60 621 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 PSD2Q9BQI7 771 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 SPATA5L1Q9BVQ7 753 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 NPLQ9BXD5 320 aaPredicted RBP9.37□□□□□ -0.91
PTPN2-210ENST00000591115 OR51I1Q9H343 314 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 SERHL2Q9H4I8 314 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 GAREM1Q9H706 876 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 EXD2Q9NVH0 621 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 EVA1BQ9NVM1 165 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 PDP1Q9P0J1 537 aaPredicted RBP9.37□□□□□ -0.91
PTPN2-210ENST00000591115 DAPP1Q9UN19 280 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 FAM32AQ9Y421 112 aaKnown RBP9.37□□□□□ -0.91
PTPN2-210ENST00000591115 SPACA6W5XKT8 324 aa9.37□□□□□ -0.91
PTPN2-210ENST00000591115 MDC1Q14676 2089 aaKnown RBP9.37□□□□□ -0.91
PTPN2-210ENST00000591115 ASXL3Q9C0F0 2248 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 LOC105369274A0A096LPK9 316 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 LOC102723532A0A0G2JNH3 316 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 A0A1B0GTQ1 180 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 ARRDC5A6NEK1 342 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 TNFRSF11BO00300 401 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 KHNYNO15037 678 aaKnown RBP9.36□□□□□ -0.91
PTPN2-210ENST00000591115 PRKRAO75569 313 aaKnown RBP9.36□□□□□ -0.91
PTPN2-210ENST00000591115 SLITRK5O94991 958 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 DIRAS1O95057 198 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 CLIC3O95833 236 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 OPN1SWP03999 348 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 IFNW1P05000 195 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 ANXA8P13928 327 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 ETS2P15036 469 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 ATP6V1B1P15313 513 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 CD247P20963 164 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 RRM2P31350 389 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 NBL1P41271 181 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 DAPP51397 102 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 CRISP3P54108 245 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 LIM2P55344 173 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 RPS26P62854 115 aaKnown RBP9.36□□□□□ -0.91
PTPN2-210ENST00000591115 PPP1R8Q12972 351 aaKnown RBP9.36□□□□□ -0.91
PTPN2-210ENST00000591115 MAPK11Q15759 364 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 NADK2Q4G0N4 442 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 DEFB134Q4QY38 66 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 ZNF691Q5VV52 312 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 FRMPD2BQ6IN97 320 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 NIPAL1Q6NVV3 410 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 OGFOD3Q6PK18 319 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 USP53Q70EK8 1073 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 SATL1Q86VE3 508 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 CCDC116Q8IYX3 515 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 OR4N4Q8N0Y3 316 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 LGI4Q8N135 537 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 LRRC25Q8N386 305 aaPredicted RBP9.36□□□□□ -0.91
PTPN2-210ENST00000591115 SLC25A45Q8N413 288 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 ARL14Q8N4G2 192 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 CSNK1A1LQ8N752 337 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 OR4K14Q8NGD5 310 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 OR4C15Q8NGM1 316 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 APOBEC4Q8WW27 367 aaKnown RBP9.36□□□□□ -0.91
PTPN2-210ENST00000591115 HDAC2Q92769 488 aaKnown RBP9.36□□□□□ -0.91
PTPN2-210ENST00000591115 PROX1Q92786 737 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 DGCR14Q96DF8 476 aaKnown RBP9.36□□□□□ -0.91
PTPN2-210ENST00000591115 ELP4Q96EB1 424 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 PIP5K1AQ99755 562 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 BTBD2Q9BX70 525 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 ING2Q9H160 280 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 SOX17Q9H6I2 414 aaPredicted RBP9.36□□□□□ -0.91
PTPN2-210ENST00000591115 CALML5Q9NZT1 146 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 KIF17Q9P2E2 1029 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 BLOC1S6Q9UL45 172 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 DOLKQ9UPQ8 538 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 LIPT1Q9Y234 373 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 LYVE1Q9Y5Y7 322 aa9.36□□□□□ -0.91
PTPN2-210ENST00000591115 GPC6Q9Y625 555 aaPredicted RBP9.36□□□□□ -0.91
PTPN2-210ENST00000591115 A0A0G2JPF8 293 aa9.35□□□□□ -0.91
PTPN2-210ENST00000591115 MYOCOSA0A1B0GUC4 107 aa9.35□□□□□ -0.91
PTPN2-210ENST00000591115 DUXAA6NLW8 204 aa9.35□□□□□ -0.91
PTPN2-210ENST00000591115 WASHC1A8K0Z3 465 aa9.35□□□□□ -0.91
PTPN2-210ENST00000591115 HNRNPCL2B2RXH8 293 aa9.35□□□□□ -0.91
PTPN2-210ENST00000591115 HNRNPCL3B7ZW38 293 aa9.35□□□□□ -0.91
PTPN2-210ENST00000591115 LMO7DNF2Z398 122 aa9.35□□□□□ -0.91
PTPN2-210ENST00000591115 SLC28A2O43868 658 aa9.35□□□□□ -0.91
PTPN2-210ENST00000591115 SRPX2O60687 465 aaPredicted RBP9.35□□□□□ -0.91
PTPN2-210ENST00000591115 GALR3O60755 368 aaPredicted RBP9.35□□□□□ -0.91
PTPN2-210ENST00000591115 PRAMEF10O60809 474 aa9.35□□□□□ -0.91
PTPN2-210ENST00000591115 SEC24DO94855 1032 aaPredicted RBP9.35□□□□□ -0.91
PTPN2-210ENST00000591115 UBXN7O94888 489 aa9.35□□□□□ -0.91
PTPN2-210ENST00000591115 CER1O95813 267 aa9.35□□□□□ -0.91
PTPN2-210ENST00000591115 AGR2O95994 175 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms