RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 RNF111Q6ZNA4 994 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 WDR53Q7Z5U6 358 aaPredicted RBP10.9□□□□□ -0.66
GABPB1-206ENST00000543881 NUDT13Q86X67 352 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 TMEM151AQ8N4L1 468 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 SLC15A4Q8N697 577 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 OR10G3Q8NGC4 313 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 UHMK1Q8TAS1 419 aaKnown RBP10.9□□□□□ -0.66
GABPB1-206ENST00000543881 SLC22A8Q8TCC7 542 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 IFT81Q8WYA0 676 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 C18orf12Q96KH6 178 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 ART5Q96L15 291 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 SERPINI1Q99574 410 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 NTMT1Q9BV86 223 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 MRPL1Q9BYD6 325 aaKnown RBP10.9□□□□□ -0.66
GABPB1-206ENST00000543881 FARSBQ9NSD9 589 aaKnown RBP10.9□□□□□ -0.66
GABPB1-206ENST00000543881 MTRF1LQ9UGC7 380 aaKnown RBP10.9□□□□□ -0.66
GABPB1-206ENST00000543881 CHCHD2Q9Y6H1 151 aaPredicted RBP10.9□□□□□ -0.66
GABPB1-206ENST00000543881 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.9□□□□□ -0.66
GABPB1-206ENST00000543881 HRNRQ86YZ3 2850 aaPredicted RBP10.9□□□□□ -0.66
GABPB1-206ENST00000543881 LRRC3CA6NJW4 275 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 POC1B-GALNT4F8VUJ3 575 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 AQP7O14520 342 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 SEMA3DO95025 777 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 LRATO95237 230 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 RAF1P04049 648 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 KLK1P06870 262 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 INHBBP09529 407 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 SLC35E2P0CK97 266 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 TSPAN8P19075 237 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 GALNSP34059 522 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 ARL1P40616 181 aaPredicted RBP10.89□□□□□ -0.67
GABPB1-206ENST00000543881 PEX19P40855 299 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 SLC10A1Q14973 349 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 DEFB113Q30KQ7 82 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 FRG2Q64ET8 278 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 TMEM198Q66K66 360 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 PAMR1Q6UXH9 720 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 CLEC9AQ6UXN8 241 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 TMEM64Q6YI46 380 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 SLC29A4Q7RTT9 530 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 ZNF441Q8N8Z8 693 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 OR4F6Q8NGB9 312 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 ATP6V1E2Q96A05 226 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 FRG2BQ96QU4 278 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 FMO2Q99518 471 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 PELOQ9BRX2 385 aaKnown RBP10.89□□□□□ -0.67
GABPB1-206ENST00000543881 ZNF703Q9H7S9 590 aaPredicted RBP10.89□□□□□ -0.67
GABPB1-206ENST00000543881 CXorf21Q9HAI6 301 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.89□□□□□ -0.67
GABPB1-206ENST00000543881 SPRR3Q9UBC9 169 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 ACAD8Q9UKU7 415 aa10.89□□□□□ -0.67
GABPB1-206ENST00000543881 CNOT11Q9UKZ1 510 aaKnown RBP10.89□□□□□ -0.67
GABPB1-206ENST00000543881 OR6C76A6NM76 312 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 TRIM49D1C9J1S8 452 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 SUSD5O60279 629 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 WDR1O75083 606 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 RPS17P08708 135 aaKnown RBP10.88□□□□□ -0.67
GABPB1-206ENST00000543881 COL6A2P12110 1019 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 UQCRC1P31930 480 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 MAN2A2P49641 1150 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 SERPINB9P50453 376 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 CDH13P55290 713 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 NTRK2Q16620 822 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 FLYWCH1Q4VC44 716 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 SGO1Q5FBB7 561 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 OR52E8Q6IFG1 317 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 LETMD1Q6P1Q0 360 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 MILR1Q7Z6M3 343 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 LRRC25Q8N386 305 aaPredicted RBP10.88□□□□□ -0.67
GABPB1-206ENST00000543881 FBXW8Q8N3Y1 598 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 ZNF615Q8N8J6 731 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 FAM13CQ8NE31 585 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 ZNF483Q8TF39 744 aaPredicted RBP10.88□□□□□ -0.67
GABPB1-206ENST00000543881 ZNF592Q92610 1267 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 ARSGQ96EG1 525 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 MDFIQ99750 246 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 WDR41Q9HAD4 459 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 ZFP64Q9NPA5 681 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 ZNF180Q9UJW8 692 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 ZNF225Q9UK10 706 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 CBLCQ9ULV8 474 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 TMCO1Q9UM00 188 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 ARHGAP21Q5T5U3 1957 aa10.88□□□□□ -0.67
GABPB1-206ENST00000543881 NSD1Q96L73 2696 aaPredicted RBP10.88□□□□□ -0.67
GABPB1-206ENST00000543881 TRGV5A0A0B4J1U4 118 aa10.87□□□□□ -0.67
GABPB1-206ENST00000543881 C2orf92A0A1B0GVN3 265 aa10.87□□□□□ -0.67
GABPB1-206ENST00000543881 A8MT66 165 aa10.87□□□□□ -0.67
GABPB1-206ENST00000543881 FAM47E-STBD1D6RA91 191 aa10.87□□□□□ -0.67
GABPB1-206ENST00000543881 SYT5O00445 386 aa10.87□□□□□ -0.67
GABPB1-206ENST00000543881 SMIM24O75264 130 aa10.87□□□□□ -0.67
GABPB1-206ENST00000543881 ATE1O95260 518 aa10.87□□□□□ -0.67
GABPB1-206ENST00000543881 S1PR1P21453 382 aa10.87□□□□□ -0.67
GABPB1-206ENST00000543881 PIK3R1P27986 724 aa10.87□□□□□ -0.67
GABPB1-206ENST00000543881 GCAP28676 217 aa10.87□□□□□ -0.67
GABPB1-206ENST00000543881 SERPINB3P29508 390 aa10.87□□□□□ -0.67
GABPB1-206ENST00000543881 HOXC12P31275 282 aa10.87□□□□□ -0.67
GABPB1-206ENST00000543881 XKP51811 444 aa10.87□□□□□ -0.67
GABPB1-206ENST00000543881 KCNJ2P63252 427 aa10.87□□□□□ -0.67
GABPB1-206ENST00000543881 FUT7Q11130 342 aa10.87□□□□□ -0.67
GABPB1-206ENST00000543881 KEAP1Q14145 624 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms