RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 NUDT14O95848 222 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 IGKV1D-16P01601 117 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 IGKV4-1P06312 121 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 TSPY3P0CV98 308 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 TSPY8P0CW00 308 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 PSMB4P28070 264 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 OAS2P29728 719 aaKnown RBP1.21□□□□□ -2.22
CCDC93-209ENST00000488908 TIA1P31483 386 aaKnown RBP eCLIP1.21□□□□□ -2.22
CCDC93-209ENST00000488908 SOAT1P35610 550 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 IER3P46695 156 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 CAPZA1P52907 286 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 PPP5CP53041 499 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 SLC3A1Q07837 685 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 GIT2Q14161 759 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 SF3A2Q15428 464 aaKnown RBP1.21□□□□□ -2.22
CCDC93-209ENST00000488908 C1orf189Q5VU69 101 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 ZFP2Q6ZN57 461 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 CREBRFQ8IUR6 639 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 DCAF4L2Q8NA75 395 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 OR4F5Q8NH21 305 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 SETD6Q8TBK2 473 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 CKAP2Q8WWK9 683 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 ERO1AQ96HE7 468 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 ERGIC2Q96RQ1 377 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 SLC17A9Q9BYT1 436 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 GPR173Q9NS66 373 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 ANKEF1Q9NU02 776 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 C5AR2Q9P296 337 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 ANAPC5Q9UJX4 755 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 C5orf52A6NGY3 159 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 G3V3Y1 287 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 M0R296 226 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 KIAA0513O60268 411 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 RAD51DO75771 328 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 GBAP04062 536 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 GSTA2P09210 222 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 ANKRD34CP0C6C1 535 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 CT45A10P0DMU9 189 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 PTPN4P29074 926 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 CDH5P33151 784 aaPredicted RBP1.2□□□□□ -2.22
CCDC93-209ENST00000488908 OR3A1P47881 315 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 NPY4RP50391 375 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 CCR4P51679 360 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 ZNF41P51814 821 aaPredicted RBP1.2□□□□□ -2.22
CCDC93-209ENST00000488908 HERVK_113P61574 105 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 EGFEM1PQ0D2K5 195 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 MOBPQ13875 183 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 GLYR1Q49A26 553 aaPredicted RBP1.2□□□□□ -2.22
CCDC93-209ENST00000488908 SBK1Q52WX2 424 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 CASC4Q6P4E1 433 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 TMEM182Q6ZP80 229 aaPredicted RBP1.2□□□□□ -2.22
CCDC93-209ENST00000488908 PCGF5Q86SE9 256 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 C17orf64Q86WR6 236 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 UNC5CLQ8IV45 518 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 TDHQ8IZJ6 230 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 SMYD1Q8NB12 490 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 BBS1Q8NFJ9 593 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 OCC1Q8TAD7 63 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 GOLGA5Q8TBA6 731 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 BSCL2Q96G97 398 aaPredicted RBP1.2□□□□□ -2.22
CCDC93-209ENST00000488908 FER1L6-AS2Q96M78 137 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 C9orf85Q96MD7 179 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 C17orf62Q9BQA9 187 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 ATG101Q9BSB4 218 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 LRRC2Q9BYS8 371 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 ANKRD2Q9GZV1 360 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 OR10A4Q9H209 315 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 ZNF665Q9H7R5 613 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 RAB9BQ9NP90 201 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 STOX2Q9P2F5 926 aaPredicted RBP1.2□□□□□ -2.22
CCDC93-209ENST00000488908 LEF1Q9UJU2 399 aaPredicted RBP1.2□□□□□ -2.22
CCDC93-209ENST00000488908 ETV7Q9Y603 341 aa1.2□□□□□ -2.22
CCDC93-209ENST00000488908 ARHGEF37A1IGU5 675 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 TMEM150BA6NC51 233 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 ANKDD1BA6NHY2 528 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 YDJCA8MPS7 323 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 FAM86B1E9PN63 330 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 ACSL4O60488 711 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 SIX3O95343 332 aaPredicted RBP1.19□□□□□ -2.22
CCDC93-209ENST00000488908 RLN1P04808 185 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 FAM86B2P0C5J1 330 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 FAM58BPP0C7Q3 252 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 LBPP18428 481 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 IDSP22304 550 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 UGT1A3P35503 534 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 SLC7A2P52569 658 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 SUCLG1P53597 346 aaKnown RBP1.19□□□□□ -2.22
CCDC93-209ENST00000488908 PTENP60484 403 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 FOLH1Q04609 750 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 MFGE8Q08431 387 aaPredicted RBP1.19□□□□□ -2.22
CCDC93-209ENST00000488908 KCTD2Q14681 263 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 MEF2DQ14814 521 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 PSMD6Q15008 389 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 RALBP1Q15311 655 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 C1orf141Q5JVX7 400 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 DDI2Q5TDH0 399 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 PM20D1Q6GTS8 502 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 SNRNP48Q6IEG0 339 aaKnown RBP1.19□□□□□ -2.22
CCDC93-209ENST00000488908 RPUSD3Q6P087 351 aaKnown RBP1.19□□□□□ -2.22
CCDC93-209ENST00000488908 APOOLQ6UXV4 268 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms