RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 KIF1AQ12756 1690 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 ZNF850A8MQ14 1090 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 AOC2O75106 756 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 TYRP14679 529 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 TIA1P31483 386 aaKnown RBP eCLIP11.5□□□□□ -0.572e-11■■□□□ 13.2
UBR4-205ENST00000417040 WNT7BP56706 349 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 OC90Q02509 493 aaPredicted RBP11.5□□□□□ -0.57
UBR4-205ENST00000417040 TEAD2Q15562 447 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 C6orf120Q7Z4R8 191 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.5□□□□□ -0.57
UBR4-205ENST00000417040 STK35Q8TDR2 534 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 METTL7AQ9H8H3 244 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 NDUFAF4Q9P032 175 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 BORCS7-ASMTA0A0B4J1R7 106 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 SMLR1H3BR10 107 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 CNOT4O95628 575 aaKnown RBP11.5□□□□□ -0.57
UBR4-205ENST00000417040 AMY2AP04746 511 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 PET100P0DJ07 73 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 ZNF35P13682 527 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 PCSK2P16519 638 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 FDXRP22570 491 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 S100PP25815 95 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 NRIP1P48552 1158 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 GALK2Q01415 458 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 CRTC1Q6UUV9 634 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 LAS2Q8IYD9 372 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 DTWD1Q8N5C7 304 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 NATD1Q8N6N6 113 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 NPWQ8N729 165 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 OR6N1Q8NGY5 312 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 SLC25A18Q9H1K4 315 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 FOLH1BQ9HBA9 442 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 REV1Q9UBZ9 1251 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 IFT52Q9Y366 437 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 PCDHGB5Q9Y5G0 923 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 C1orf196B1AJZ1 125 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 C7P10643 843 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 PRKCAP17252 672 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 VSX2P58304 361 aaPredicted RBP11.5□□□□□ -0.57
UBR4-205ENST00000417040 TBPL1P62380 186 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 GNMTQ14749 295 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 SGCAQ16586 387 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 PCGF3Q3KNV8 242 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 OR8K5Q8NH50 307 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 SLC22A17Q8WUG5 538 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 IMP4Q96G21 291 aaKnown RBP11.5□□□□□ -0.57
UBR4-205ENST00000417040 RANGRFQ9HD47 186 aaPredicted RBP11.5□□□□□ -0.57
UBR4-205ENST00000417040 RXFP3Q9NSD7 469 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 AK6Q9Y3D8 172 aaKnown RBP11.5□□□□□ -0.57
UBR4-205ENST00000417040 A0A0G2JLL6 359 aaPredicted RBP11.5□□□□□ -0.57
UBR4-205ENST00000417040 CPED1A4D0V7 1026 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 CARNS1A5YM72 827 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 SCO2O43819 266 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 RFPL3O75679 317 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 TNFP01375 233 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 PTGER1P34995 402 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 ART1P52961 327 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 BRAT1Q6PJG6 821 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 IL20RBQ6UXL0 311 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 PRRT2Q7Z6L0 340 aaPredicted RBP11.5□□□□□ -0.57
UBR4-205ENST00000417040 B3GNT8Q7Z7M8 397 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 ZDHHC14Q8IZN3 488 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 HUS1BQ8NHY5 278 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 OR5P2Q8WZ92 322 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 DCUN1D4Q92564 292 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 BORCS8Q96FH0 119 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 OR8D2Q9GZM6 311 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 HAPLN2Q9GZV7 340 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 CNIH4Q9P003 139 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 PCDHGB2Q9Y5G2 931 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 LAMP1P11279 417 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 HSD3B1P14060 373 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 S1PR1P21453 382 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 SLC2A5P22732 501 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 BEX5Q5H9J7 111 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 EMC10Q5UCC4 262 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 GTPBP8Q8N3Z3 284 aaPredicted RBP11.49□□□□□ -0.57
UBR4-205ENST00000417040 PARP16Q8N5Y8 322 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 ESX1Q8N693 406 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 OR2T35Q8NGX2 323 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 SLC22A18Q96BI1 424 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 CNTNAP3BQ96NU0 1288 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 CMKLR1Q99788 373 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 TMEM184CQ9NVA4 438 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 PCDHGA6Q9Y5G7 932 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 CACNG2Q9Y698 323 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 MYH3P11055 1940 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 LOC105369274A0A096LPK9 316 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 A6NL46 340 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 PPP1R3DO95685 299 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 FBXO45P0C2W1 286 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 GJA5P36382 358 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 MTNR1AP48039 350 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 TCEAL1Q15170 157 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 TP53I3Q53FA7 332 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 HACD2Q6Y1H2 254 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 OR4N4Q8N0Y3 316 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 OR4K17Q8NGC6 315 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 ZNF514Q96K75 400 aaPredicted RBP11.49□□□□□ -0.57
UBR4-205ENST00000417040 LSM5Q9Y4Y9 91 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms