RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 KLHL29Q96CT2 875 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 CNRIP1Q96F85 164 aaPredicted RBP16.31■□□□□ 0.2
LSM5-204ENST00000409909 ZNF681Q96N22 645 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 DMRTA2Q96SC8 542 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 IL1RL2Q9HB29 575 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 TNFRSF12AQ9NP84 129 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 OXSMQ9NWU1 459 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 DTX4Q9Y2E6 619 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 DLGAP4Q9Y2H0 992 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 CHCHD2Q9Y6H1 151 aaPredicted RBP16.31■□□□□ 0.2
LSM5-204ENST00000409909 NINQ8N4C6 2090 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 ABCA12Q86UK0 2595 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 SERTM1A2A2V5 107 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 GOLGA6L10A6NI86 522 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 COPEO14579 308 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 PCDH7O60245 1069 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 CDH16O75309 829 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 ATP1B1P05026 303 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 IL3P08700 152 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 CELA3AP09093 270 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 CPA3P15088 417 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 CSNK2A2P19784 350 aaPredicted RBP16.3■□□□□ 0.2
LSM5-204ENST00000409909 SERPINB3P29508 390 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 MAGEA5P43359 124 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 ALDH9A1P49189 494 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 MAP4K2Q12851 820 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 DUSP8Q13202 625 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 NTRK2Q16620 822 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 HYAL4Q2M3T9 481 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 EMC4Q5J8M3 183 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 PRAMEF20Q5VT98 475 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 ARHGAP11AQ6P4F7 1023 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 XKRXQ6PP77 449 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 FAM13CQ8NE31 585 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 ADCY4Q8NFM4 1077 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 OR7G1Q8NGA0 311 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 OR5M3Q8NGP4 307 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 TP53INP1Q96A56 240 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 FAIM2Q9BWQ8 316 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 MAT2BQ9NZL9 334 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 ZNF639Q9UID6 485 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 CNOT11Q9UKZ1 510 aaKnown RBP16.3■□□□□ 0.2
LSM5-204ENST00000409909 PSME2Q9UL46 239 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 LIPGQ9Y5X9 500 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.3■□□□□ 0.2
LSM5-204ENST00000409909 TACC2O95359 2948 aa16.3■□□□□ 0.2
LSM5-204ENST00000409909 TLDC2A0PJX2 215 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 E9PLN8 166 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 ACOT7O00154 380 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 LRATO95237 230 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 TPOP07202 933 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 GPX3P22352 226 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 FBXW4P57775 412 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 BTKQ06187 659 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 ACSM2AQ08AH3 577 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 EXOSC7Q15024 291 aaKnown RBP16.29■□□□□ 0.2
LSM5-204ENST00000409909 LTB4RQ15722 352 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 SPIN4Q56A73 249 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 ACSM2BQ68CK6 577 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 GALNT18Q6P9A2 607 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 CD163Q86VB7 1156 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 DND1Q8IYX4 353 aaKnown RBP16.29■□□□□ 0.2
LSM5-204ENST00000409909 TAGAPQ8N103 731 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 VWA5B2Q8N398 1253 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 FBXW8Q8N3Y1 598 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 RDH11Q8TC12 318 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 C16orf78Q8WTQ4 265 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 CTHRC1Q96CG8 243 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 VKORC1Q9BQB6 163 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 BRINP2Q9C0B6 783 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 CNIH4Q9P003 139 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 UTS2RQ9UKP6 389 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 ENTPD4Q9Y227 616 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 KLF2Q9Y5W3 355 aaPredicted RBP16.29■□□□□ 0.2
LSM5-204ENST00000409909 FBN2P35556 2912 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 NCKAP5O14513 1909 aa16.29■□□□□ 0.2
LSM5-204ENST00000409909 GNG14A0A1W2PPG7 69 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 CCDC151A5D8V7 595 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 CBX7O95931 251 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 IGHG3P01860 377 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 RFPL3SP0C7P2 107 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 DRD2P14416 443 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 AGAP20933 346 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 HTR1EP28566 365 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 TIA1P31483 386 aaKnown RBP eCLIP16.28■□□□□ 0.2
LSM5-204ENST00000409909 SMSP52788 366 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 TRMT12Q53H54 448 aaKnown RBP16.28■□□□□ 0.2
LSM5-204ENST00000409909 C6orf163Q5TEZ5 329 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 HLA-DQA1Q5Y7H0 255 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 TRILQ7L0X0 811 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 C10orf107Q8IVU9 208 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 SLC34A3Q8N130 599 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 FAM109AQ8N4B1 249 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 MARVELD2Q8N4S9 558 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 CCDC63Q8NA47 563 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 AENQ8WTP8 325 aaKnown RBP16.28■□□□□ 0.2
LSM5-204ENST00000409909 PHF10Q8WUB8 498 aaKnown RBP16.28■□□□□ 0.2
LSM5-204ENST00000409909 EBPLQ9BY08 206 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 SHCBP1LQ9BZQ2 653 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 NXF5Q9H1B4 397 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms