RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 ARHGAP15Q53QZ3 475 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 ZNF385BQ569K4 471 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 TRIQKQ629K1 86 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 ANKRD54Q6NXT1 300 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 FAM180BQ6P0A1 224 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 TMEM220Q6QAJ8 160 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 ZNF852Q6ZMS4 543 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 NLRP8Q86W28 1048 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 RASGRP3Q8IV61 690 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 SFTPA1Q8IWL2 248 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 LGI4Q8N135 537 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 ZNF557Q8N988 423 aaPredicted RBP9.04□□□□□ -0.96
PAX6-273ENST00000640610 C19orf18Q8NEA5 215 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 NLGN4YQ8NFZ3 816 aaPredicted RBP9.04□□□□□ -0.96
PAX6-273ENST00000640610 CREB3L4Q8TEY5 395 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 NEIL2Q969S2 332 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 TMEM80Q96HE8 168 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 FCRL1Q96LA6 429 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 MAGEB10Q96LZ2 347 aaPredicted RBP9.04□□□□□ -0.96
PAX6-273ENST00000640610 DCLRE1CQ96SD1 692 aaKnown RBP9.04□□□□□ -0.96
PAX6-273ENST00000640610 MAPKAP1Q9BPZ7 522 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 C1QTNF7Q9BXJ2 289 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 MIXL1Q9H2W2 232 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 SPATA6Q9NWH7 488 aaPredicted RBP9.04□□□□□ -0.96
PAX6-273ENST00000640610 NDUFB11Q9NX14 153 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 MRPL39Q9NYK5 338 aaKnown RBP9.04□□□□□ -0.96
PAX6-273ENST00000640610 CLEC1BQ9P126 229 aa9.04□□□□□ -0.96
PAX6-273ENST00000640610 WASH3PC4AMC7 463 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 ZNF197O14709 1029 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 SLC16A5O15375 505 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 PRKAR1AP10644 381 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 PRPS1L1P21108 318 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 DDX6P26196 483 aaKnown RBP eCLIP9.03□□□□□ -0.96
PAX6-273ENST00000640610 RPS13P62277 151 aaKnown RBP9.03□□□□□ -0.96
PAX6-273ENST00000640610 POLR2LP62875 67 aaKnown RBP9.03□□□□□ -0.96
PAX6-273ENST00000640610 ACSM2AQ08AH3 577 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 FOXD4Q12950 439 aaPredicted RBP9.03□□□□□ -0.96
PAX6-273ENST00000640610 MEDAGQ5VYS4 303 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 ACSM2BQ68CK6 577 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 BRAT1Q6PJG6 821 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 PARS2Q7L3T8 475 aaKnown RBP9.03□□□□□ -0.96
PAX6-273ENST00000640610 TMPRSS11BQ86T26 416 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 C2orf73Q8N5S3 287 aaPredicted RBP9.03□□□□□ -0.96
PAX6-273ENST00000640610 TRAM1L1Q8N609 369 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 OR4K1Q8NGD4 311 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 OR8H1Q8NGG4 311 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 OR4C15Q8NGM1 316 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 HUS1BQ8NHY5 278 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 CSGALNACT1Q8TDX6 532 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 TMEM159Q96B96 161 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 C11orf24Q96F05 449 aaPredicted RBP9.03□□□□□ -0.96
PAX6-273ENST00000640610 SPNS1Q9H2V7 528 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 SYNDIG1Q9H7V2 258 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 ZDHHC4Q9NPG8 344 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 SLC23A1Q9UHI7 598 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 EXO1Q9UQ84 846 aaKnown RBP9.03□□□□□ -0.96
PAX6-273ENST00000640610 LSM2Q9Y333 95 aaKnown RBP9.03□□□□□ -0.96
PAX6-273ENST00000640610 KCNE2Q9Y6J6 123 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 BRWD1Q9NSI6 2320 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 DOCK8Q8NF50 2099 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 A0A1W2PQL4 384 aaPredicted RBP9.03□□□□□ -0.96
PAX6-273ENST00000640610 ORC5O43913 435 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 SLC43A1O75387 559 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 SLC22A5O76082 557 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 OPN1SWP03999 348 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 HLA-EP13747 358 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 DDX5P17844 614 aaKnown RBP9.03□□□□□ -0.96
PAX6-273ENST00000640610 IGFBP4P22692 258 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 CLDN20P56880 219 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 MC1RQ01726 317 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 SPIBQ01892 262 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 SRSF11Q05519 484 aaKnown RBP9.03□□□□□ -0.96
PAX6-273ENST00000640610 TMEM115Q12893 351 aaPredicted RBP9.03□□□□□ -0.96
PAX6-273ENST00000640610 SPHARQ15513 63 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 TEAD4Q15561 434 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.03□□□□□ -0.96
PAX6-273ENST00000640610 CYP27C1Q4G0S4 372 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 LIPJQ5W064 366 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 FAM122CQ6P4D5 195 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 LIPIQ6XZB0 460 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 KCTD20Q7Z5Y7 419 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 TECPR1Q7Z6L1 1165 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 OR7G3Q8NG95 312 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 SPPL2AQ8TCT8 520 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 AP3S1Q92572 193 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 GLYATL1Q969I3 302 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 CCDC120Q96HB5 630 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 NIPSNAP1Q9BPW8 284 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 DUSP26Q9BV47 211 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 MND1Q9BWT6 205 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 TPT1P8Q9HAU6 139 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 NDUFAF4Q9P032 175 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 IL36AQ9UHA7 158 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 PHF11Q9UIL8 331 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 CORO2BQ9UQ03 480 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 POLHQ9Y253 713 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 PLXNA2O75051 1894 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 TMEM265A0A087WTH1 108 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 SLC5A10A0PJK1 596 aa9.03□□□□□ -0.96
PAX6-273ENST00000640610 SCAMP2O15127 329 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms