RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 COG8Q96MW5 612 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 NIPSNAP1Q9BPW8 284 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 PHF7Q9BWX1 381 aaPredicted RBP17.1■□□□□ 0.33
SMPD3-211ENST00000568373 GPR174Q9BXC1 333 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 ROGDIQ9GZN7 287 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 DUSP21Q9H596 190 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 GPR27Q9NS67 375 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 SCN3BQ9NY72 215 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 TMEM9Q9P0T7 183 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 PILRAQ9UKJ1 303 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 PSME2Q9UL46 239 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 ENTPD2Q9Y5L3 495 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 GPC6Q9Y625 555 aaPredicted RBP17.1■□□□□ 0.33
SMPD3-211ENST00000568373 ZNF780BQ9Y6R6 833 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 FAM221BA6H8Z2 402 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 ARRDC5A6NEK1 342 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 FFAR1O14842 300 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 P2RX6O15547 441 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 CCNB2O95067 398 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 HMGN2P05204 90 aaKnown RBP17.09■□□□□ 0.33
SMPD3-211ENST00000568373 SMIM10L1P0DMW3 83 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 FUT4P22083 530 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 CRISP3P54108 245 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 SNRPNP63162 240 aaKnown RBP17.09■□□□□ 0.33
SMPD3-211ENST00000568373 SLC35A2P78381 396 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 PRR5P85299 388 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 SUZ12Q15022 739 aaKnown RBP17.09■□□□□ 0.33
SMPD3-211ENST00000568373 CCDC85BQ15834 202 aaPredicted RBP17.09■□□□□ 0.33
SMPD3-211ENST00000568373 ZNF542PQ5EBM4 170 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 COLEC12Q5KU26 742 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 SYT13Q7L8C5 426 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 KRT73Q86Y46 540 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 MIPOL1Q8TD10 442 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 THAP11Q96EK4 314 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 SMIM10Q96HG1 83 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 ALPK1Q96QP1 1244 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 ZNF556Q9HAH1 456 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 RASSF1Q9NS23 344 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 WSB2Q9NYS7 404 aaPredicted RBP17.09■□□□□ 0.33
SMPD3-211ENST00000568373 RHCGQ9UBD6 479 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 PCDHGB1Q9Y5G3 927 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 KLK4Q9Y5K2 254 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 KIR2DS5A0A0G2JLQ3 304 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 A0A0G2JNG1 304 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 OR5K4A6NMS3 321 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 C2orf74A8MZ97 194 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 KIR2DS3K7RE56 304 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 PCDHGA12O60330 932 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 NDUFS2O75306 463 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 CELA2BP08218 269 aaPredicted RBP17.09■□□□□ 0.33
SMPD3-211ENST00000568373 THEGLP0DJG4 465 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 CHRNB1P11230 501 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 ITIH1P19827 911 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 PCMT1P22061 227 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 GGT2P36268 569 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 FZD2Q14332 565 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 KIR2DS5Q14953 304 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 Q6ZPB1 254 aaPredicted RBP17.09■□□□□ 0.33
SMPD3-211ENST00000568373 ENTHD1Q8IYW4 607 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 TAGAPQ8N103 731 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 OR9A2Q8NGT5 310 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 ZCCHC10Q8TBK6 192 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 SLC37A2Q8TED4 501 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 KLHL6Q8WZ60 621 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 UBE2FQ969M7 185 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 MUL1Q969V5 352 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 SERINC2Q96SA4 455 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 CCDC90BQ9GZT6 254 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 NAA50Q9GZZ1 169 aaKnown RBP17.09■□□□□ 0.33
SMPD3-211ENST00000568373 BCL2L10Q9HD36 194 aa17.09■□□□□ 0.33
SMPD3-211ENST00000568373 KNL1Q8NG31 2342 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 URADA6NGE7 173 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 EMC8O43402 210 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 WBP4O75554 376 aaKnown RBP17.08■□□□□ 0.33
SMPD3-211ENST00000568373 CBLP22681 906 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 CD6P30203 668 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 BUD31P41223 144 aaPredicted RBP17.08■□□□□ 0.33
SMPD3-211ENST00000568373 TNFRSF17Q02223 184 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 RELAQ04206 551 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 FUT5Q11128 374 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 GNA13Q14344 377 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 SMN1Q16637 294 aaKnown RBP17.08■□□□□ 0.33
SMPD3-211ENST00000568373 TCTN3Q6NUS6 607 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 SFTPA2Q8IWL1 248 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 CAMKVQ8NCB2 501 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 BBS10Q8TAM1 723 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 ELP4Q96EB1 424 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 OTUB1Q96FW1 271 aaPredicted RBP17.08■□□□□ 0.33
SMPD3-211ENST00000568373 C10orf90Q96M02 699 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 ZFYVE21Q9BQ24 234 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 YIPF4Q9BSR8 244 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 KLHL25Q9H0H3 589 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 C2orf42Q9NWW7 574 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 KCMF1Q9P0J7 381 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 PHF11Q9UIL8 331 aa17.08■□□□□ 0.33
SMPD3-211ENST00000568373 NOL3O60936 208 aaKnown RBP17.08■□□□□ 0.32
SMPD3-211ENST00000568373 SEMA7AO75326 666 aa17.08■□□□□ 0.32
SMPD3-211ENST00000568373 ATE1O95260 518 aa17.08■□□□□ 0.32
SMPD3-211ENST00000568373 KRT20P35900 424 aa17.08■□□□□ 0.32
SMPD3-211ENST00000568373 NUDT1P36639 197 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms