RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SKP1P63208 163 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 MC2RQ01718 297 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 BST1Q10588 318 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 CSTF3Q12996 717 aaKnown RBP5.44□□□□□ -1.54
SCAF11-213ENST00000550629 IFT88Q13099 833 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 TUBB3Q13509 450 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 CUL3Q13618 768 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 C16orf72Q14CZ0 275 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 ZRSR2Q15696 482 aaKnown RBP5.44□□□□□ -1.54
SCAF11-213ENST00000550629 ADPRMQ3LIE5 342 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 CCDC157Q569K6 752 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 FBXO48Q5FWF7 155 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 GARNL3Q5VVW2 1013 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 FBXO42Q6P3S6 717 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 TLDC1Q6P9B6 456 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 ZCCHC23Q6ZST2 131 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 ADCK2Q7Z695 626 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 SYVN1Q86TM6 617 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 CUZD1Q86UP6 607 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 MYLK4Q86YV6 388 aaPredicted RBP5.44□□□□□ -1.54
SCAF11-213ENST00000550629 LRRC34Q8IZ02 419 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 CLYBLQ8N0X4 340 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 BMPERQ8N8U9 685 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 CAMKVQ8NCB2 501 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 ZNF740Q8NDX6 193 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 OR4F6Q8NGB9 312 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 WDR36Q8NI36 951 aaKnown RBP5.44□□□□□ -1.54
SCAF11-213ENST00000550629 METTL6Q8TCB7 284 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 NT5CQ8TCD5 201 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 ASB10Q8WXI3 467 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 RAB24Q969Q5 203 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 TM4SF19Q96DZ7 209 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 METTL2AQ96IZ6 378 aaKnown RBP5.44□□□□□ -1.54
SCAF11-213ENST00000550629 PPM1MQ96MI6 270 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 TEFMQ96QE5 360 aaKnown RBP5.44□□□□□ -1.54
SCAF11-213ENST00000550629 SIKE1Q9BRV8 207 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 DDA1Q9BW61 102 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 TOR3AQ9H497 397 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 ELOVL6Q9H5J4 265 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 BRF2Q9HAW0 419 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 CLK4Q9HAZ1 481 aaKnown RBP5.44□□□□□ -1.54
SCAF11-213ENST00000550629 FAM60AQ9NP50 221 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 MID1IP1Q9NPA3 183 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 FGF21Q9NSA1 209 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 ABCF3Q9NUQ8 709 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 NMRK1Q9NWW6 199 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 SERTAD3Q9UJW9 196 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 ZNF225Q9UK10 706 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 ZNF490Q9ULM2 529 aaPredicted RBP5.44□□□□□ -1.54
SCAF11-213ENST00000550629 RNF11Q9Y3C5 154 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 SLC22A7Q9Y694 548 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 ASCC3Q8N3C0 2202 aaKnown RBP5.44□□□□□ -1.54
SCAF11-213ENST00000550629 TDRD6O60522 2096 aaKnown RBP5.44□□□□□ -1.54
SCAF11-213ENST00000550629 CFAP54Q96N23 3096 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 URADA6NGE7 173 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 ANKDD1BA6NHY2 528 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 TRPC5OSA6NMA1 111 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 SRRM3A6NNA2 597 aaPredicted RBP5.43□□□□□ -1.54
SCAF11-213ENST00000550629 A8MU76 341 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 H0YGG7 62 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 H3BMH7 237 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 PPP6CO00743 305 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 CASC3O15234 703 aaKnown RBP5.43□□□□□ -1.54
SCAF11-213ENST00000550629 VPS4BO75351 444 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 OR2B3O76000 313 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 OR4F21O95013 312 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 SEMA3DO95025 777 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 TGDSO95455 350 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 CAPN1P07384 714 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 CHRNGP07510 517 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 EGR2P11161 476 aaPredicted RBP5.43□□□□□ -1.54
SCAF11-213ENST00000550629 FOLR1P15328 257 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 TSPAN8P19075 237 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 HMOX2P30519 316 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 ARRB2P32121 409 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 RPL14P50914 215 aaKnown RBP5.43□□□□□ -1.54
SCAF11-213ENST00000550629 ARSFP54793 590 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 ARF3P61204 181 aaPredicted RBP5.43□□□□□ -1.54
SCAF11-213ENST00000550629 STXBP1P61764 594 aaKnown RBP5.43□□□□□ -1.54
SCAF11-213ENST00000550629 MXRA7P84157 204 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 RGS1Q08116 209 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 TGM3Q08188 693 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 TARDBPQ13148 414 aaKnown RBP eCLIP5.43□□□□□ -1.54
SCAF11-213ENST00000550629 FAM53BQ14153 422 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 HERC3Q15034 1050 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 RBBP5Q15291 538 aaKnown RBP5.43□□□□□ -1.54
SCAF11-213ENST00000550629 PRTGQ2VWP7 1150 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 UGT3A2Q3SY77 523 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 SPDYE7PQ495Y7 208 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 SH2D4BQ5SQS7 431 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 DCAF12Q5T6F0 453 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 KHDRBS2Q5VWX1 349 aaKnown RBP5.43□□□□□ -1.54
SCAF11-213ENST00000550629 CES4AQ5XG92 561 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 TTC19Q6DKK2 380 aaPredicted RBP5.43□□□□□ -1.54
SCAF11-213ENST00000550629 FRMPD2BQ6IN97 320 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 RPS27LQ71UM5 84 aaKnown RBP5.43□□□□□ -1.54
SCAF11-213ENST00000550629 ABHD13Q7L211 337 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 RAB11FIP2Q7L804 512 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 VN1R4Q7Z5H5 301 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 ASPGQ86U10 573 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms