RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 LGSNQ5TDP6 509 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 TTC19Q6DKK2 380 aaPredicted RBP14.96□□□□□ -0.01
DDX55-212ENST00000544738 ZZZ3Q8IYH5 903 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 DND1Q8IYX4 353 aaKnown RBP14.96□□□□□ -0.01
DDX55-212ENST00000544738 NUDT8Q8WV74 236 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 SREK1Q8WXA9 508 aaKnown RBP14.96□□□□□ -0.01
DDX55-212ENST00000544738 PPWD1Q96BP3 646 aaKnown RBP14.96□□□□□ -0.01
DDX55-212ENST00000544738 ALPK1Q96QP1 1244 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 MRPL57Q9BQC6 102 aaKnown RBP14.96□□□□□ -0.01
DDX55-212ENST00000544738 GPATCH1Q9BRR8 931 aaKnown RBP14.96□□□□□ -0.01
DDX55-212ENST00000544738 ZDHHC11Q9H8X9 412 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 AHSPQ9NZD4 102 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 PCTPQ9UKL6 214 aa14.96□□□□□ -0.01
DDX55-212ENST00000544738 NBEAL1Q6ZS30 2694 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 A0A1W2PR48 441 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 TRIM49D1C9J1S8 452 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 KIF2AO00139 706 aaPredicted RBP14.95□□□□□ -0.02
DDX55-212ENST00000544738 TMPRSS11DO60235 418 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 OR10H2O60403 315 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 PDE9AO76083 593 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 ASPHQ12797 758 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 IFT88Q13099 833 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 SPRED3Q2MJR0 410 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 SLC22A10Q63ZE4 541 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 FRG2Q64ET8 278 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 OR52E8Q6IFG1 317 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 FAM47EQ6ZV65 393 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 SLC29A4Q7RTT9 530 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 C9orf40Q8IXQ3 194 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 RPRMLQ8N4K4 120 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 WFDC11Q8NEX6 87 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 OR52B6Q8NGF0 335 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 SPATA3Q8NHX4 192 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 RIT1Q92963 219 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 C18orf12Q96KH6 178 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 FRG2BQ96QU4 278 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 TTTY12Q9BZ98 90 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 DEFB127Q9H1M4 99 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 MRPL46Q9H2W6 279 aaKnown RBP14.95□□□□□ -0.02
DDX55-212ENST00000544738 CLEC4MQ9H2X3 399 aaPredicted RBP14.95□□□□□ -0.02
DDX55-212ENST00000544738 TP63Q9H3D4 680 aaPredicted RBP14.95□□□□□ -0.02
DDX55-212ENST00000544738 XPR1Q9UBH6 696 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 ADAM29Q9UKF5 820 aa14.95□□□□□ -0.02
DDX55-212ENST00000544738 FBN1P35555 2871 aaKnown RBP14.95□□□□□ -0.02
DDX55-212ENST00000544738 PINLYPA6NC86 204 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 OR6C76A6NM76 312 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 FAM166BA8MTA8 275 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 ZNF354AO60765 605 aaPredicted RBP14.94□□□□□ -0.02
DDX55-212ENST00000544738 PRKRAO75569 313 aaKnown RBP14.94□□□□□ -0.02
DDX55-212ENST00000544738 SNRPAP09012 282 aaKnown RBP14.94□□□□□ -0.02
DDX55-212ENST00000544738 INHBBP09529 407 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 SLC35E2P0CK97 266 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 ECHS1P30084 290 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 SNTB1Q13884 538 aaKnown RBP14.94□□□□□ -0.02
DDX55-212ENST00000544738 ZNF267Q14586 743 aaPredicted RBP14.94□□□□□ -0.02
DDX55-212ENST00000544738 ZNF791Q3KP31 576 aaPredicted RBP14.94□□□□□ -0.02
DDX55-212ENST00000544738 GGTA1PQ4G0N0 100 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 RNF111Q6ZNA4 994 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 DGAT2L6Q6ZPD8 337 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 PAGE2Q7Z2X7 111 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 MILR1Q7Z6M3 343 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 FAM109AQ8N4B1 249 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 MYRIPQ8NFW9 859 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 GOT1L1Q8NHS2 421 aaPredicted RBP14.94□□□□□ -0.02
DDX55-212ENST00000544738 DCAKDQ8WVC6 231 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 CDK15Q96Q40 435 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 CNPPD1Q9BV87 410 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 IL1RL2Q9HB29 575 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 ZBTB26Q9HCK0 441 aa14.94□□□□□ -0.02
DDX55-212ENST00000544738 ATRQ13535 2644 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 EXOC1LA0A1B0GW35 172 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 OR14I1A6ND48 311 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 GLOD5A6NK44 160 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 G3V3Y1 287 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 GUCY1B2O75343 617 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 GLSO94925 669 aaPredicted RBP14.93□□□□□ -0.02
DDX55-212ENST00000544738 AIFM1O95831 613 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 OTCP00480 354 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 CCL3P10147 92 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 PIK3R1P27986 724 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 SERPINB3P29508 390 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 SLC37A1P57057 533 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 HERVK_113P63132 956 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 ERVK-8P63133 956 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 TRAF3Q13114 568 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 HYAL4Q2M3T9 481 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 CNPY4Q8N129 248 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 OR10Q1Q8NGQ4 319 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 PAQR8Q8TEZ7 354 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 SPACA9Q96E40 222 aaPredicted RBP14.93□□□□□ -0.02
DDX55-212ENST00000544738 ARSGQ96EG1 525 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 NSUN5Q96P11 429 aaKnown RBP14.93□□□□□ -0.02
DDX55-212ENST00000544738 ERVK-6Q9BXR3 956 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 ELOVL6Q9H5J4 265 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 SEMA4BQ9NPR2 832 aaPredicted RBP14.93□□□□□ -0.02
DDX55-212ENST00000544738 CNIH4Q9P003 139 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 ERVK-19Q9WJR5 959 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 L3MBTL1Q9Y468 752 aa14.93□□□□□ -0.02
DDX55-212ENST00000544738 A0A0G2JMM0 328 aa14.92□□□□□ -0.02
DDX55-212ENST00000544738 A0A1W2PPB8 328 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms