RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 TMEM198Q66K66 360 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 GTF2H2CQ6P1K8 395 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 METTL2BQ6P1Q9 378 aaKnown RBP20.91■□□□□ 0.94
USP42-205ENST00000465073 L3MBTL4Q8NA19 623 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 NINJ1Q92982 152 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 ZNF597Q96LX8 424 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 RAB17Q9H0T7 212 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 IPPKQ9H8X2 491 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 SNX15Q9NRS6 342 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 TNPO3Q9Y5L0 923 aaKnown RBP20.91■□□□□ 0.94
USP42-205ENST00000465073 AIFM1O95831 613 aa20.9■□□□□ 0.94
USP42-205ENST00000465073 CLPSP04118 112 aa20.9■□□□□ 0.94
USP42-205ENST00000465073 GDF1P27539 372 aa20.9■□□□□ 0.94
USP42-205ENST00000465073 IRF9Q00978 393 aa20.9■□□□□ 0.94
USP42-205ENST00000465073 C2orf54Q08AI8 447 aa20.9■□□□□ 0.94
USP42-205ENST00000465073 MROH9Q5TGP6 573 aa20.9■□□□□ 0.94
USP42-205ENST00000465073 SEM1Q6ZVN7 128 aa20.9■□□□□ 0.94
USP42-205ENST00000465073 NUDT13Q86X67 352 aa20.9■□□□□ 0.94
USP42-205ENST00000465073 ZZZ3Q8IYH5 903 aa20.9■□□□□ 0.94
USP42-205ENST00000465073 ZNF441Q8N8Z8 693 aa20.9■□□□□ 0.94
USP42-205ENST00000465073 WDR20Q8TBZ3 569 aa20.9■□□□□ 0.94
USP42-205ENST00000465073 DIO2Q92813 273 aa20.9■□□□□ 0.94
USP42-205ENST00000465073 POLDIP3Q9BY77 421 aaKnown RBP20.9■□□□□ 0.94
USP42-205ENST00000465073 CXorf21Q9HAI6 301 aa20.9■□□□□ 0.94
USP42-205ENST00000465073 ANKHD1Q8IWZ3 2542 aaKnown RBP20.9■□□□□ 0.94
USP42-205ENST00000465073 LRRC14BA6NHZ5 514 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 SNX4O95219 450 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 LRATO95237 230 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 EPPINO95925 133 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 NEK2P51955 445 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 GUCY2DQ02846 1103 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 DUSP8Q13202 625 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 RPS6KA2Q15349 733 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 HLA-DQA1Q5Y7H0 255 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 OR52E8Q6IFG1 317 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 KLC3Q6P597 504 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 GOLGA7Q7Z5G4 137 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 LRRC46Q96FV0 321 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 SECISBP2Q96T21 854 aaKnown RBP20.89■□□□□ 0.94
USP42-205ENST00000465073 SERPINI1Q99574 410 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 FOXC2Q99958 501 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 PYCARDQ9ULZ3 195 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 RNF11Q9Y3C5 154 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 IKBKGQ9Y6K9 419 aa20.89■□□□□ 0.94
USP42-205ENST00000465073 C15orf38-AP3S2A0A0A6YYH1 394 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 DVL2O14641 736 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 SEMA3DO95025 777 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 KLHL2O95198 593 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 PIK3R1P27986 724 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 SSTR4P31391 388 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 UQCRC1P31930 480 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 TMED10P49755 219 aaKnown RBP20.88■□□□□ 0.93
USP42-205ENST00000465073 ZDHHC24Q6UX98 284 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 TMEM64Q6YI46 380 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 SPPL2AQ8TCT8 520 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 UCN3Q969E3 161 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 TIMP4Q99727 224 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 CXXC4Q9H2H0 198 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 NPFFR2Q9Y5X5 522 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 HMX2A2RU54 273 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 FAM221AA4D161 298 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 PGRMC2O15173 223 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 TRAPPC6AO75865 159 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 CLDN9O95484 217 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 CEACAM8P31997 349 aaPredicted RBP20.88■□□□□ 0.93
USP42-205ENST00000465073 NRG3P56975 720 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 FBXW4P57775 412 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 CRYZQ08257 329 aaKnown RBP20.88■□□□□ 0.93
USP42-205ENST00000465073 FUT7Q11130 342 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 SF3B4Q15427 424 aaKnown RBP eCLIP20.88■□□□□ 0.934e-6■□□□□ 9.9
USP42-205ENST00000465073 ACSF3Q4G176 576 aaPredicted RBP20.88■□□□□ 0.93
USP42-205ENST00000465073 PACS2Q86VP3 889 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 GALNT12Q8IXK2 581 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 RILPQ96NA2 401 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 ANGPTL4Q9BY76 406 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 RASSF1Q9NS23 344 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 CRIM1Q9NZV1 1036 aa20.88■□□□□ 0.93
USP42-205ENST00000465073 CPSF2Q9P2I0 782 aaKnown RBP20.88■□□□□ 0.93
USP42-205ENST00000465073 ZNF629Q9UEG4 869 aaPredicted RBP20.88■□□□□ 0.93
USP42-205ENST00000465073 NINQ8N4C6 2090 aa20.87■□□□□ 0.93
USP42-205ENST00000465073 AKAP6Q13023 2319 aa20.87■□□□□ 0.93
USP42-205ENST00000465073 A0A096LPK6 155 aa20.87■□□□□ 0.93
USP42-205ENST00000465073 GBAP04062 536 aa20.87■□□□□ 0.93
USP42-205ENST00000465073 TIMP3P35625 211 aa20.87■□□□□ 0.93
USP42-205ENST00000465073 ASCL1P50553 236 aa20.87■□□□□ 0.93
USP42-205ENST00000465073 CDK9P50750 372 aaKnown RBP20.87■□□□□ 0.93
USP42-205ENST00000465073 RPP38P78345 283 aaKnown RBP20.87■□□□□ 0.93
USP42-205ENST00000465073 SNTB1Q13884 538 aaKnown RBP20.87■□□□□ 0.93
USP42-205ENST00000465073 TRADDQ15628 312 aa20.87■□□□□ 0.93
USP42-205ENST00000465073 FBXL19-AS1Q494R0 122 aa20.87■□□□□ 0.93
USP42-205ENST00000465073 LACC1Q8IV20 430 aa20.87■□□□□ 0.93
USP42-205ENST00000465073 PM20D2Q8IYS1 436 aa20.87■□□□□ 0.93
USP42-205ENST00000465073 ZNF615Q8N8J6 731 aa20.87■□□□□ 0.93
USP42-205ENST00000465073 RELL2Q8NC24 303 aaPredicted RBP20.87■□□□□ 0.93
USP42-205ENST00000465073 CHDHQ8NE62 594 aaPredicted RBP20.87■□□□□ 0.93
USP42-205ENST00000465073 C17orf47Q8NEP4 570 aa20.87■□□□□ 0.93
USP42-205ENST00000465073 OR4K14Q8NGD5 310 aa20.87■□□□□ 0.93
USP42-205ENST00000465073 FAM222BQ8WU58 562 aa20.87■□□□□ 0.93
USP42-205ENST00000465073 GPR78Q96P69 363 aa20.87■□□□□ 0.93
USP42-205ENST00000465073 GPATCH1Q9BRR8 931 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms