RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 TMEM198Q66K66 360 aa19.07■□□□□ 0.64
CPNE1-219ENST00000440240 GOLGA7Q7Z5G4 137 aa19.07■□□□□ 0.64
CPNE1-219ENST00000440240 LIX1LQ8IVB5 337 aa19.07■□□□□ 0.64
CPNE1-219ENST00000440240 WDR20Q8TBZ3 569 aa19.07■□□□□ 0.64
CPNE1-219ENST00000440240 ATP6V1E2Q96A05 226 aa19.07■□□□□ 0.64
CPNE1-219ENST00000440240 MRRFQ96E11 262 aaKnown RBP19.07■□□□□ 0.64
CPNE1-219ENST00000440240 SERPINI1Q99574 410 aa19.07■□□□□ 0.64
CPNE1-219ENST00000440240 HMX2A2RU54 273 aa19.06■□□□□ 0.64
CPNE1-219ENST00000440240 LRRC14BA6NHZ5 514 aa19.06■□□□□ 0.64
CPNE1-219ENST00000440240 LRRC3CA6NJW4 275 aa19.06■□□□□ 0.64
CPNE1-219ENST00000440240 HSPB2A8KAH6 182 aa19.06■□□□□ 0.64
CPNE1-219ENST00000440240 SEMA3DO95025 777 aa19.06■□□□□ 0.64
CPNE1-219ENST00000440240 AIFM1O95831 613 aa19.06■□□□□ 0.64
CPNE1-219ENST00000440240 PIK3R1P27986 724 aa19.06■□□□□ 0.64
CPNE1-219ENST00000440240 PEX19P40855 299 aa19.06■□□□□ 0.64
CPNE1-219ENST00000440240 HSPB2Q16082 182 aa19.06■□□□□ 0.64
CPNE1-219ENST00000440240 C10orf62Q5T681 223 aaPredicted RBP19.06■□□□□ 0.64
CPNE1-219ENST00000440240 OR52E8Q6IFG1 317 aa19.06■□□□□ 0.64
CPNE1-219ENST00000440240 ARSKQ6UWY0 536 aa19.06■□□□□ 0.64
CPNE1-219ENST00000440240 ULK2Q8IYT8 1036 aa19.06■□□□□ 0.64
CPNE1-219ENST00000440240 DIO2Q92813 273 aa19.06■□□□□ 0.64
CPNE1-219ENST00000440240 GPR78Q96P69 363 aa19.06■□□□□ 0.64
CPNE1-219ENST00000440240 CXorf21Q9HAI6 301 aa19.06■□□□□ 0.64
CPNE1-219ENST00000440240 CPSF2Q9P2I0 782 aaKnown RBP19.06■□□□□ 0.64
CPNE1-219ENST00000440240 L3MBTL1Q9Y468 752 aa19.06■□□□□ 0.64
CPNE1-219ENST00000440240 AHRRA9YTQ3 701 aa19.05■□□□□ 0.64
CPNE1-219ENST00000440240 SNX4O95219 450 aa19.05■□□□□ 0.64
CPNE1-219ENST00000440240 SIX3O95343 332 aaPredicted RBP19.05■□□□□ 0.64
CPNE1-219ENST00000440240 GDF1P27539 372 aa19.05■□□□□ 0.64
CPNE1-219ENST00000440240 PHBP35232 272 aa19.05■□□□□ 0.64
CPNE1-219ENST00000440240 ARL1P40616 181 aaPredicted RBP19.05■□□□□ 0.64
CPNE1-219ENST00000440240 TMED10P49755 219 aaKnown RBP19.05■□□□□ 0.64
CPNE1-219ENST00000440240 SERPINB8P50452 374 aa19.05■□□□□ 0.64
CPNE1-219ENST00000440240 DLX5P56178 289 aa19.05■□□□□ 0.64
CPNE1-219ENST00000440240 NRG3P56975 720 aa19.05■□□□□ 0.64
CPNE1-219ENST00000440240 UAP1Q16222 522 aaPredicted RBP19.05■□□□□ 0.64
CPNE1-219ENST00000440240 WDR53Q7Z5U6 358 aaPredicted RBP19.05■□□□□ 0.64
CPNE1-219ENST00000440240 ZNF597Q96LX8 424 aa19.05■□□□□ 0.64
CPNE1-219ENST00000440240 SECISBP2Q96T21 854 aaKnown RBP19.05■□□□□ 0.64
CPNE1-219ENST00000440240 SLC6A15Q9H2J7 730 aa19.05■□□□□ 0.64
CPNE1-219ENST00000440240 NOL11Q9H8H0 719 aaKnown RBP19.05■□□□□ 0.64
CPNE1-219ENST00000440240 AHSPQ9NZD4 102 aa19.05■□□□□ 0.64
CPNE1-219ENST00000440240 NPFFR2Q9Y5X5 522 aa19.05■□□□□ 0.64
CPNE1-219ENST00000440240 ANKHD1Q8IWZ3 2542 aaKnown RBP19.05■□□□□ 0.64
CPNE1-219ENST00000440240 NINQ8N4C6 2090 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 PGRMC2O15173 223 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 TRIM3O75382 744 aaPredicted RBP19.04■□□□□ 0.64
CPNE1-219ENST00000440240 GBAP04062 536 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 ALDOAP04075 364 aaKnown RBP19.04■□□□□ 0.64
CPNE1-219ENST00000440240 CLPSP04118 112 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 TRPC1P48995 793 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 ART1P52961 327 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 ETF1P62495 437 aaKnown RBP19.04■□□□□ 0.64
CPNE1-219ENST00000440240 RPP38P78345 283 aaKnown RBP19.04■□□□□ 0.64
CPNE1-219ENST00000440240 FUT7Q11130 342 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 RPS6KA2Q15349 733 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 SF3B4Q15427 424 aaKnown RBP eCLIP19.04■□□□□ 0.646e-9■■■■□ 24.3
CPNE1-219ENST00000440240 PACS2Q86VP3 889 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 GALNT12Q8IXK2 581 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 ZNF441Q8N8Z8 693 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 OR4K14Q8NGD5 310 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 UCN3Q969E3 161 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 LRRC46Q96FV0 321 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 NTMT1Q9BV86 223 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 VPS11Q9H270 941 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 TMCO1Q9UM00 188 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 IKBKGQ9Y6K9 419 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 ZFHX3Q15911 3703 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 ITPR3Q14573 2671 aa19.04■□□□□ 0.64
CPNE1-219ENST00000440240 SYT5O00445 386 aa19.03■□□□□ 0.64
CPNE1-219ENST00000440240 EPPINO95925 133 aa19.03■□□□□ 0.64
CPNE1-219ENST00000440240 RBP1P09455 135 aa19.03■□□□□ 0.64
CPNE1-219ENST00000440240 SSTR4P31391 388 aa19.03■□□□□ 0.64
CPNE1-219ENST00000440240 DNAJA1P31689 397 aaKnown RBP19.03■□□□□ 0.64
CPNE1-219ENST00000440240 XKP51811 444 aa19.03■□□□□ 0.64
CPNE1-219ENST00000440240 DUSP8Q13202 625 aa19.03■□□□□ 0.64
CPNE1-219ENST00000440240 C6orf163Q5TEZ5 329 aa19.03■□□□□ 0.64
CPNE1-219ENST00000440240 FRG2Q64ET8 278 aa19.03■□□□□ 0.64
CPNE1-219ENST00000440240 TTC19Q6DKK2 380 aaPredicted RBP19.03■□□□□ 0.64
CPNE1-219ENST00000440240 PAGE2Q7Z2X7 111 aa19.03■□□□□ 0.64
CPNE1-219ENST00000440240 ZNF572Q7Z3I7 529 aaPredicted RBP19.03■□□□□ 0.64
CPNE1-219ENST00000440240 PTGR2Q8N8N7 351 aaPredicted RBP19.03■□□□□ 0.64
CPNE1-219ENST00000440240 FRG2BQ96QU4 278 aa19.03■□□□□ 0.64
CPNE1-219ENST00000440240 ANGPTL4Q9BY76 406 aa19.03■□□□□ 0.64
CPNE1-219ENST00000440240 OR10A5Q9H207 317 aa19.03■□□□□ 0.64
CPNE1-219ENST00000440240 ADAM29Q9UKF5 820 aa19.03■□□□□ 0.64
CPNE1-219ENST00000440240 C15orf38-AP3S2A0A0A6YYH1 394 aa19.02■□□□□ 0.64
CPNE1-219ENST00000440240 OR7A17O14581 309 aa19.02■□□□□ 0.64
CPNE1-219ENST00000440240 DVL2O14641 736 aa19.02■□□□□ 0.64
CPNE1-219ENST00000440240 CDH16O75309 829 aa19.02■□□□□ 0.64
CPNE1-219ENST00000440240 GUCY1B2O75343 617 aa19.02■□□□□ 0.64
CPNE1-219ENST00000440240 CTAG2O75638 210 aa19.02■□□□□ 0.64
CPNE1-219ENST00000440240 TRAPPC6AO75865 159 aa19.02■□□□□ 0.64
CPNE1-219ENST00000440240 LRATO95237 230 aa19.02■□□□□ 0.64
CPNE1-219ENST00000440240 KLK1P06870 262 aa19.02■□□□□ 0.64
CPNE1-219ENST00000440240 KIR2DL3P43628 341 aa19.02■□□□□ 0.64
CPNE1-219ENST00000440240 CCNG1P51959 295 aa19.02■□□□□ 0.64
CPNE1-219ENST00000440240 FBXW4P57775 412 aa19.02■□□□□ 0.64
CPNE1-219ENST00000440240 TECRLQ5HYJ1 363 aa19.02■□□□□ 0.64
CPNE1-219ENST00000440240 TMEM64Q6YI46 380 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms