RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 PRLHRP49683 370 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 CCR3P51677 355 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 POLE2P56282 527 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 STX1BP61266 288 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 RPS21P63220 83 aaKnown RBP3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 GALNT1Q10472 559 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 LCP2Q13094 533 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 SGCGQ13326 291 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 TDGQ13569 410 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 ENPP2Q13822 863 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 IRF4Q15306 451 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 TGFBIQ15582 683 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 MLF2Q15773 248 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 BCL7AQ4VC05 210 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 UNC50Q53HI1 259 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 ACSBG2Q5FVE4 666 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 PIP5KL1Q5T9C9 394 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 ATPAF1Q5TC12 328 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 VWA5B1Q5TIE3 1220 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 CES4AQ5XG92 561 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 SULT1C3Q6IMI6 304 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 SLC30A9Q6PML9 568 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 SBSNQ6UWP8 590 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 C6orf89Q6UWU4 347 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 C18orf65Q6ZTR6 163 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 GPRIN3Q6ZVF9 776 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 NEK10Q6ZWH5 1172 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 LRRC70Q7Z2Q7 622 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 TRIM74Q86UV6 250 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 KBTBD6Q86V97 674 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 HEATR4Q86WZ0 1026 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 FAM185AQ8N0U4 392 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 AADATQ8N5Z0 425 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 PRR26Q8N8Z3 221 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 RASGEF1AQ8N9B8 481 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 SNX31Q8N9S9 440 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 IL17RCQ8NAC3 791 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 OR56A4Q8NGH8 313 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 RPLP0P6Q8NHW5 317 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 DTX3LQ8TDB6 740 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 ELP5Q8TE02 316 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 TRPC4APQ8TEL6 797 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 NAT14Q8WUY8 206 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 ASZ1Q8WWH4 475 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 ATP6V1E2Q96A05 226 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 SKA1Q96BD8 255 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 KLHL29Q96CT2 875 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 SIPA1Q96FS4 1042 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 PDLIM5Q96HC4 596 aaKnown RBP3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 ZNF514Q96K75 400 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 RAB3IPQ96QF0 476 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 GABRG3Q99928 467 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 EBF4Q9BQW3 602 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 CCM2Q9BSQ5 444 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 CCDC28BQ9BUN5 200 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 NUF2Q9BZD4 464 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 C20orf27Q9GZN8 174 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 TP63Q9H3D4 680 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 COG4Q9H9E3 785 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 MID1IP1Q9NPA3 183 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 TRPV5Q9NQA5 729 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 TCF7L2Q9NQB0 619 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 PFDN4Q9NQP4 134 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 PHPT1Q9NRX4 125 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 LIN7CQ9NUP9 197 aaKnown RBP3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 MRGBPQ9NV56 204 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 FBXL12Q9NXK8 326 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 GALPQ9UBC7 116 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 OPTCQ9UBM4 332 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 WNT16Q9UBV4 365 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 MOSPD1Q9UJG1 213 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 DTX4Q9Y2E6 619 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 CAPN7Q9Y6W3 813 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 LRP4O75096 1905 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 MYO7AQ13402 2215 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 ANTXRLA6NF34 631 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 CFAP73A6NFT4 308 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 IGLON5A6NGN9 336 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 MBD3L5A6NJ08 208 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 INAFM1C9JVW0 142 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 E9PBE3 544 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 K7EPI3 171 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 CACNB4O00305 520 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 SDHDO14521 159 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 ACOT8O14734 319 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 LIN7AO14910 233 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 AZIN1O14977 448 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 SLC16A5O15375 505 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 RGS14O43566 566 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 SPRY3O43610 288 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 PLRG1O43660 514 aaKnown RBP3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 KLHL41O60662 606 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 GPC4O75487 556 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 CBX6O95503 412 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 TSPAN12O95859 305 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 OTCP00480 354 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 SERPINA6P08185 405 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 SLC35G4P0C7Q5 338 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 GLULP15104 373 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms