RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 NUP133Q8WUM0 1156 aa11.79□□□□□ -0.52
KCNMA1-228ENST00000638223 ECHDC1Q9NTX5 307 aa11.79□□□□□ -0.52
KCNMA1-228ENST00000638223 RNF17Q9BXT8 1623 aaKnown RBP11.79□□□□□ -0.52
KCNMA1-228ENST00000638223 TRPC5Q9UL62 973 aaPredicted RBP11.79□□□□□ -0.52
KCNMA1-228ENST00000638223 CYP46A1Q9Y6A2 500 aa11.79□□□□□ -0.52
KCNMA1-228ENST00000638223 MAP3K12Q12852 859 aa11.79□□□□□ -0.52
KCNMA1-228ENST00000638223 RHPN1Q8TCX5 695 aa11.79□□□□□ -0.52
KCNMA1-228ENST00000638223 NSFL1CQ9UNZ2 370 aaKnown RBP11.79□□□□□ -0.52
KCNMA1-228ENST00000638223 HCLS1P14317 486 aaPredicted RBP11.78□□□□□ -0.52
KCNMA1-228ENST00000638223 USP5P45974 858 aa11.78□□□□□ -0.52
KCNMA1-228ENST00000638223 BLOC1S2Q6QNY1 142 aa11.78□□□□□ -0.52
KCNMA1-228ENST00000638223 DIP2CQ9Y2E4 1556 aa11.78□□□□□ -0.52
KCNMA1-228ENST00000638223 JAKMIP1Q96N16 626 aaKnown RBP11.78□□□□□ -0.52
KCNMA1-228ENST00000638223 UPF3BQ9BZI7 483 aaKnown RBP11.78□□□□□ -0.52
KCNMA1-228ENST00000638223 USP16Q9Y5T5 823 aa11.78□□□□□ -0.52
KCNMA1-228ENST00000638223 STK32BQ9NY57 414 aa11.78□□□□□ -0.52
KCNMA1-228ENST00000638223 CLTCL1P53675 1640 aa11.78□□□□□ -0.52
KCNMA1-228ENST00000638223 BICD2Q8TD16 824 aa11.77□□□□□ -0.52
KCNMA1-228ENST00000638223 IQGAP3Q86VI3 1631 aa11.77□□□□□ -0.52
KCNMA1-228ENST00000638223 ERBB3P21860 1342 aa11.77□□□□□ -0.52
KCNMA1-228ENST00000638223 KCNQ4P56696 695 aa11.77□□□□□ -0.53
KCNMA1-228ENST00000638223 ATP2B3Q16720 1220 aa11.77□□□□□ -0.53
KCNMA1-228ENST00000638223 CARD10Q9BWT7 1032 aa11.77□□□□□ -0.53
KCNMA1-228ENST00000638223 PARP3Q9Y6F1 533 aa11.77□□□□□ -0.53
KCNMA1-228ENST00000638223 SPATA31A3Q5VYP0 1347 aa11.77□□□□□ -0.53
KCNMA1-228ENST00000638223 PTMSP20962 102 aa11.77□□□□□ -0.53
KCNMA1-228ENST00000638223 CHMP5Q9NZZ3 219 aa11.77□□□□□ -0.53
KCNMA1-228ENST00000638223 RABEP1Q15276 862 aa11.77□□□□□ -0.53
KCNMA1-228ENST00000638223 CCAR1Q8IX12 1150 aaKnown RBP11.77□□□□□ -0.53
KCNMA1-228ENST00000638223 PIBF1Q8WXW3 757 aa11.77□□□□□ -0.53
KCNMA1-228ENST00000638223 BACH2Q9BYV9 841 aa11.77□□□□□ -0.53
KCNMA1-228ENST00000638223 CTNNA3Q9UI47 895 aa11.77□□□□□ -0.53
KCNMA1-228ENST00000638223 POLR3DP05423 398 aaPredicted RBP11.76□□□□□ -0.53
KCNMA1-228ENST00000638223 UBAC1Q9BSL1 405 aa11.76□□□□□ -0.53
KCNMA1-228ENST00000638223 EIF4A1P60842 406 aaKnown RBP11.76□□□□□ -0.53
KCNMA1-228ENST00000638223 NAPBQ9H115 298 aa11.76□□□□□ -0.53
KCNMA1-228ENST00000638223 CCDC87Q9NVE4 849 aa11.76□□□□□ -0.53
KCNMA1-228ENST00000638223 ADGRL3Q9HAR2 1447 aa11.76□□□□□ -0.53
KCNMA1-228ENST00000638223 WDR17Q8IZU2 1322 aa11.76□□□□□ -0.53
KCNMA1-228ENST00000638223 SLC4A8Q2Y0W8 1093 aa11.76□□□□□ -0.53
KCNMA1-228ENST00000638223 ANKRD44Q8N8A2 993 aa11.76□□□□□ -0.53
KCNMA1-228ENST00000638223 ASAP1Q9ULH1 1129 aa11.76□□□□□ -0.53
KCNMA1-228ENST00000638223 F8W031 263 aaPredicted RBP11.75□□□□□ -0.53
KCNMA1-228ENST00000638223 POLD1P28340 1107 aa11.75□□□□□ -0.53
KCNMA1-228ENST00000638223 PRPF40BQ6NWY9 871 aaKnown RBP11.75□□□□□ -0.53
KCNMA1-228ENST00000638223 CRACR2BQ8N4Y2 399 aaPredicted RBP11.75□□□□□ -0.53
KCNMA1-228ENST00000638223 PES1O00541 588 aaKnown RBP11.75□□□□□ -0.53
KCNMA1-228ENST00000638223 TRIM37O94972 964 aa11.75□□□□□ -0.53
KCNMA1-228ENST00000638223 ERVV-2B6SEH9 535 aa11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 ATP8B2P98198 1209 aa11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 CNBD1Q8NA66 436 aa11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 NYXQ9GZU5 481 aa11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 MPHOSPH10O00566 681 aaKnown RBP11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 XBP1P17861 261 aa11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 BAG6P46379 1132 aa11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 USP19O94966 1318 aa11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 SH3TC1Q8TE82 1336 aa11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 IMMTQ16891 758 aaKnown RBP11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 C16orf71Q8IYS4 520 aaPredicted RBP11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 PLBD2Q8NHP8 589 aa11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 JAG2Q9Y219 1238 aa11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 CCDC69A6NI79 296 aa11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 KLHDC4Q8TBB5 520 aa11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 MKNK2Q9HBH9 465 aa11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 AXIN2Q9Y2T1 843 aa11.74□□□□□ -0.53
KCNMA1-228ENST00000638223 ATP7BP35670 1465 aa11.73□□□□□ -0.53
KCNMA1-228ENST00000638223 NUCB2P80303 420 aa11.73□□□□□ -0.53
KCNMA1-228ENST00000638223 L1TD1Q5T7N2 865 aaKnown RBP11.73□□□□□ -0.53
KCNMA1-228ENST00000638223 GIGYF1O75420 1035 aaPredicted RBP11.73□□□□□ -0.53
KCNMA1-228ENST00000638223 ZC3H12CQ9C0D7 883 aaKnown RBP11.73□□□□□ -0.53
KCNMA1-228ENST00000638223 BICC1Q9H694 974 aaKnown RBP11.73□□□□□ -0.53
KCNMA1-228ENST00000638223 DDX11L8A8MPP1 907 aa11.73□□□□□ -0.53
KCNMA1-228ENST00000638223 RXRBP28702 533 aa11.73□□□□□ -0.53
KCNMA1-228ENST00000638223 KDM5AP29375 1690 aaKnown RBP11.73□□□□□ -0.53
KCNMA1-228ENST00000638223 IL15P40933 162 aaPredicted RBP11.73□□□□□ -0.53
KCNMA1-228ENST00000638223 MSL1Q68DK7 614 aa11.73□□□□□ -0.53
KCNMA1-228ENST00000638223 IGSF1Q8N6C5 1336 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 RIMBP2O15034 1052 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 BRMS1Q9HCU9 246 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 RANBP6O60518 1105 aaKnown RBP11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 HAND2P61296 217 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 CEBPZQ03701 1054 aaKnown RBP11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 METTL22Q9BUU2 404 aaPredicted RBP11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 BABAM1Q9NWV8 329 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 AATKQ6ZMQ8 1374 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 CEP152O94986 1710 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 CASTP20810 708 aaKnown RBP11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 CCDC43Q96MW1 224 aaKnown RBP11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 PTPRMP28827 1452 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 ALKQ9UM73 1620 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 LOC102724428A0A0B4J2F2 783 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 HOXB7P09629 217 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 SIK1P57059 783 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 CEP85Q6P2H3 762 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 TTLL7Q6ZT98 887 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 UNC5CLQ8IV45 518 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 CERKQ8TCT0 537 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 PDRG1Q9NUG6 133 aa11.72□□□□□ -0.53
KCNMA1-228ENST00000638223 U3KPZ7 1027 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms