RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 POLR3AO14802 1390 aaPredicted RBP10.26□□□□□ -0.77
PATJ-216ENST00000635214 SURF6O75683 361 aaKnown RBP10.26□□□□□ -0.77
PATJ-216ENST00000635214 TNNT1P13805 278 aa10.26□□□□□ -0.77
PATJ-216ENST00000635214 EXOSC9Q06265 439 aaKnown RBP10.26□□□□□ -0.77
PATJ-216ENST00000635214 GTF2F1P35269 517 aaKnown RBP eCLIP10.26□□□□□ -0.77
PATJ-216ENST00000635214 CCAR1Q8IX12 1150 aaKnown RBP10.26□□□□□ -0.77
PATJ-216ENST00000635214 RPAP2Q8IXW5 612 aaPredicted RBP10.25□□□□□ -0.77
PATJ-216ENST00000635214 NUDT16Q96DE0 195 aaKnown RBP10.25□□□□□ -0.77
PATJ-216ENST00000635214 LRRC7Q96NW7 1537 aa10.25□□□□□ -0.77
PATJ-216ENST00000635214 BBXQ8WY36 941 aaPredicted RBP10.25□□□□□ -0.77
PATJ-216ENST00000635214 DLC1Q96QB1 1528 aa10.25□□□□□ -0.77
PATJ-216ENST00000635214 ADGRF5Q8IZF2 1346 aa10.25□□□□□ -0.77
PATJ-216ENST00000635214 IMMTQ16891 758 aaKnown RBP10.25□□□□□ -0.77
PATJ-216ENST00000635214 UVSSAQ2YD98 709 aa10.25□□□□□ -0.77
PATJ-216ENST00000635214 CHD1LQ86WJ1 897 aa10.25□□□□□ -0.77
PATJ-216ENST00000635214 KRT222Q8N1A0 295 aa10.25□□□□□ -0.77
PATJ-216ENST00000635214 GPATCH11Q8N954 259 aa10.25□□□□□ -0.77
PATJ-216ENST00000635214 PAXBP1Q9Y5B6 917 aa10.25□□□□□ -0.77
PATJ-216ENST00000635214 GOLGA6L10A0A0M3HER8 536 aa10.25□□□□□ -0.77
PATJ-216ENST00000635214 RXRBP28702 533 aa10.24□□□□□ -0.77
PATJ-216ENST00000635214 CEBPZQ03701 1054 aaKnown RBP10.24□□□□□ -0.77
PATJ-216ENST00000635214 CTR9Q6PD62 1173 aa10.24□□□□□ -0.77
PATJ-216ENST00000635214 TMEM131LA2VDJ0 1609 aa10.24□□□□□ -0.77
PATJ-216ENST00000635214 URI1O94763 535 aaPredicted RBP10.24□□□□□ -0.77
PATJ-216ENST00000635214 TMPOP42166 694 aaKnown RBP10.24□□□□□ -0.77
PATJ-216ENST00000635214 ABTB2Q8N961 1025 aa10.24□□□□□ -0.77
PATJ-216ENST00000635214 TAF4BQ92750 862 aa10.24□□□□□ -0.77
PATJ-216ENST00000635214 ANO10Q9NW15 660 aa10.24□□□□□ -0.77
PATJ-216ENST00000635214 NUTM2FA1L443 756 aa10.24□□□□□ -0.77
PATJ-216ENST00000635214 KIF5CO60282 957 aa10.24□□□□□ -0.77
PATJ-216ENST00000635214 GNAI2P04899 355 aa10.24□□□□□ -0.77
PATJ-216ENST00000635214 HMOX1P09601 288 aa10.24□□□□□ -0.77
PATJ-216ENST00000635214 GSDMDP57764 484 aa10.24□□□□□ -0.77
PATJ-216ENST00000635214 CCDC83Q8IWF9 413 aa10.24□□□□□ -0.77
PATJ-216ENST00000635214 CDK5RAP3Q96JB5 506 aa10.24□□□□□ -0.77
PATJ-216ENST00000635214 PLEKHH1Q9ULM0 1364 aa10.24□□□□□ -0.77
PATJ-216ENST00000635214 GTF2A1P52655 376 aaPredicted RBP10.24□□□□□ -0.77
PATJ-216ENST00000635214 SMARCC1Q92922 1105 aaPredicted RBP10.24□□□□□ -0.77
PATJ-216ENST00000635214 NEUROD6Q96NK8 337 aa10.24□□□□□ -0.77
PATJ-216ENST00000635214 TRIM34Q9BYJ4 488 aa10.24□□□□□ -0.77
PATJ-216ENST00000635214 SCAND2PQ9GZW5 306 aaPredicted RBP10.24□□□□□ -0.77
PATJ-216ENST00000635214 IVLP07476 585 aa10.23□□□□□ -0.77
PATJ-216ENST00000635214 CFAP100Q494V2 611 aa10.23□□□□□ -0.77
PATJ-216ENST00000635214 DNAAF4Q8WXU2 420 aa10.23□□□□□ -0.77
PATJ-216ENST00000635214 PRDM11Q9NQV5 511 aa10.23□□□□□ -0.77
PATJ-216ENST00000635214 FBXO3Q9UK99 471 aa10.23□□□□□ -0.77
PATJ-216ENST00000635214 SBNO1A3KN83 1393 aa10.23□□□□□ -0.77
PATJ-216ENST00000635214 GOLGA6L9A6NEM1 432 aa10.23□□□□□ -0.77
PATJ-216ENST00000635214 HSPA1LP34931 641 aa10.23□□□□□ -0.77
PATJ-216ENST00000635214 MAP2K1Q02750 393 aaPredicted RBP10.23□□□□□ -0.77
PATJ-216ENST00000635214 LUZP1Q86V48 1076 aa10.23□□□□□ -0.77
PATJ-216ENST00000635214 IPO4Q8TEX9 1081 aaKnown RBP10.23□□□□□ -0.77
PATJ-216ENST00000635214 POLR3GO15318 223 aaPredicted RBP10.23□□□□□ -0.77
PATJ-216ENST00000635214 KRT32Q14532 448 aa10.23□□□□□ -0.77
PATJ-216ENST00000635214 TRIM22Q8IYM9 498 aa10.23□□□□□ -0.77
PATJ-216ENST00000635214 CTAGE5O15320 804 aa10.23□□□□□ -0.77
PATJ-216ENST00000635214 CAVIN2O95810 425 aa10.23□□□□□ -0.77
PATJ-216ENST00000635214 CASQ1P31415 396 aa10.23□□□□□ -0.77
PATJ-216ENST00000635214 BLOC1S2Q6QNY1 142 aa10.23□□□□□ -0.77
PATJ-216ENST00000635214 SPG7Q9UQ90 795 aa10.23□□□□□ -0.77
PATJ-216ENST00000635214 ANKRD62A6NC57 917 aa10.22□□□□□ -0.77
PATJ-216ENST00000635214 ATP2B1P20020 1258 aa10.22□□□□□ -0.77
PATJ-216ENST00000635214 MNAT1P51948 309 aa10.22□□□□□ -0.77
PATJ-216ENST00000635214 KIAA1328Q86T90 577 aa10.22□□□□□ -0.77
PATJ-216ENST00000635214 VPS37DQ86XT2 251 aa10.22□□□□□ -0.77
PATJ-216ENST00000635214 CTDP1Q9Y5B0 961 aaPredicted RBP10.22□□□□□ -0.77
PATJ-216ENST00000635214 SPATA31E1Q6ZUB1 1445 aa10.22□□□□□ -0.77
PATJ-216ENST00000635214 TATP17735 454 aaPredicted RBP10.22□□□□□ -0.77
PATJ-216ENST00000635214 CLTCL1P53675 1640 aa10.22□□□□□ -0.77
PATJ-216ENST00000635214 IRX3P78415 501 aaPredicted RBP10.22□□□□□ -0.77
PATJ-216ENST00000635214 KIF4BQ2VIQ3 1234 aa10.22□□□□□ -0.77
PATJ-216ENST00000635214 TBC1D2BQ9UPU7 963 aa10.22□□□□□ -0.77
PATJ-216ENST00000635214 NWD1Q149M9 1564 aa10.22□□□□□ -0.77
PATJ-216ENST00000635214 CDKL5O76039 1030 aa10.22□□□□□ -0.77
PATJ-216ENST00000635214 GBP2P32456 591 aaPredicted RBP10.22□□□□□ -0.77
PATJ-216ENST00000635214 NECTIN2Q92692 538 aa10.22□□□□□ -0.77
PATJ-216ENST00000635214 TRERF1Q96PN7 1200 aa10.22□□□□□ -0.77
PATJ-216ENST00000635214 BCAR3O75815 825 aa10.21□□□□□ -0.77
PATJ-216ENST00000635214 CLIP2Q9UDT6 1046 aa10.21□□□□□ -0.77
PATJ-216ENST00000635214 ALKQ9UM73 1620 aa10.21□□□□□ -0.77
PATJ-216ENST00000635214 SMC1AQ14683 1233 aaKnown RBP10.21□□□□□ -0.77
PATJ-216ENST00000635214 AMOTQ4VCS5 1084 aa10.21□□□□□ -0.77
PATJ-216ENST00000635214 PDRG1Q9NUG6 133 aa10.21□□□□□ -0.77
PATJ-216ENST00000635214 CCDC91Q7Z6B0 441 aa10.21□□□□□ -0.78
PATJ-216ENST00000635214 CCDC125Q86Z20 511 aa10.21□□□□□ -0.78
PATJ-216ENST00000635214 NOB1Q9ULX3 412 aaKnown RBP10.21□□□□□ -0.78
PATJ-216ENST00000635214 SOS1Q07889 1333 aaPredicted RBP10.21□□□□□ -0.78
PATJ-216ENST00000635214 KLHL40Q2TBA0 621 aa10.21□□□□□ -0.78
PATJ-216ENST00000635214 TICAM2Q86XR7 235 aa10.21□□□□□ -0.78
PATJ-216ENST00000635214 NOL7Q9UMY1 257 aaKnown RBP10.21□□□□□ -0.78
PATJ-216ENST00000635214 ADAMTS13Q76LX8 1427 aa10.21□□□□□ -0.78
PATJ-216ENST00000635214 RNF187Q5TA31 235 aaPredicted RBP10.2□□□□□ -0.78
PATJ-216ENST00000635214 RIC3Q7Z5B4 369 aa10.2□□□□□ -0.78
PATJ-216ENST00000635214 ZNF397Q8NF99 534 aaPredicted RBP10.2□□□□□ -0.78
PATJ-216ENST00000635214 ARHGAP45Q92619 1136 aa10.2□□□□□ -0.78
PATJ-216ENST00000635214 TECPR2O15040 1411 aa10.2□□□□□ -0.78
PATJ-216ENST00000635214 PTPRCP08575 1304 aa10.2□□□□□ -0.78
PATJ-216ENST00000635214 CCDC175P0C221 793 aa10.2□□□□□ -0.78
PATJ-216ENST00000635214 LMAN1P49257 510 aa10.2□□□□□ -0.78
PATJ-216ENST00000635214 SULT6B1Q6IMI4 303 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms