RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 TFCP2Q12800 502 aa9.06□□□□□ -0.96
PKP4-217ENST00000628904 CNNM1Q9NRU3 951 aa9.06□□□□□ -0.96
PKP4-217ENST00000628904 ASAP1Q9ULH1 1129 aa9.06□□□□□ -0.96
PKP4-217ENST00000628904 SMC3Q9UQE7 1217 aa9.06□□□□□ -0.96
PKP4-217ENST00000628904 CHMLP26374 656 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 GUCY1B3Q02153 619 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 BEND3Q5T5X7 828 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 SLC52A2Q9HAB3 445 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 CDK12Q9NYV4 1490 aaPredicted RBP9.05□□□□□ -0.96
PKP4-217ENST00000628904 DDX11L8A8MPP1 907 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 PHKG2P15735 406 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 HSP90AB4PQ58FF6 505 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 FAM173BQ6P4H8 233 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 TMX3Q96JJ7 454 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 SEC62Q99442 399 aaKnown RBP9.05□□□□□ -0.96
PKP4-217ENST00000628904 IL25Q9H293 177 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 ARHGEF10O15013 1369 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 CCDC57Q2TAC2 916 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 EPHA10Q5JZY3 1008 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 DNAJC10Q8IXB1 793 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 JAG2Q9Y219 1238 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 MAP2P11137 1827 aaKnown RBP9.05□□□□□ -0.96
PKP4-217ENST00000628904 NPHP4O75161 1426 aaPredicted RBP9.05□□□□□ -0.96
PKP4-217ENST00000628904 SNAP23O00161 211 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 ECHDC1Q9NTX5 307 aa9.05□□□□□ -0.96
PKP4-217ENST00000628904 CCDC82Q8N4S0 544 aa9.04□□□□□ -0.96
PKP4-217ENST00000628904 EAF2Q96CJ1 260 aaPredicted RBP9.04□□□□□ -0.96
PKP4-217ENST00000628904 DBNDD2Q9BQY9 259 aa9.04□□□□□ -0.96
PKP4-217ENST00000628904 DDX21Q9NR30 783 aaKnown RBP eCLIP9.04□□□□□ -0.96
PKP4-217ENST00000628904 IDH1O75874 414 aaKnown RBP9.04□□□□□ -0.96
PKP4-217ENST00000628904 LINS1Q8NG48 757 aa9.04□□□□□ -0.96
PKP4-217ENST00000628904 RUFY2Q8WXA3 655 aa9.04□□□□□ -0.96
PKP4-217ENST00000628904 CHMP4AQ9BY43 222 aa9.04□□□□□ -0.96
PKP4-217ENST00000628904 CEP170BQ9Y4F5 1589 aaPredicted RBP9.04□□□□□ -0.96
PKP4-217ENST00000628904 GLRX3O76003 335 aaKnown RBP9.04□□□□□ -0.96
PKP4-217ENST00000628904 RRP12Q5JTH9 1297 aaKnown RBP9.04□□□□□ -0.96
PKP4-217ENST00000628904 BRINP3Q76B58 766 aa9.04□□□□□ -0.96
PKP4-217ENST00000628904 C8orf37Q96NL8 207 aa9.04□□□□□ -0.96
PKP4-217ENST00000628904 IL2RBP14784 551 aa9.03□□□□□ -0.96
PKP4-217ENST00000628904 PRIM1P49642 420 aaKnown RBP9.03□□□□□ -0.96
PKP4-217ENST00000628904 CCT2P78371 535 aaKnown RBP9.03□□□□□ -0.96
PKP4-217ENST00000628904 TRMT112Q9UI30 125 aaKnown RBP9.03□□□□□ -0.96
PKP4-217ENST00000628904 WWC3Q9ULE0 1092 aa9.03□□□□□ -0.96
PKP4-217ENST00000628904 COL3A1P02461 1466 aaPredicted RBP9.03□□□□□ -0.96
PKP4-217ENST00000628904 SYCE3A1L190 88 aa9.03□□□□□ -0.96
PKP4-217ENST00000628904 RAB11FIP3O75154 756 aa9.03□□□□□ -0.96
PKP4-217ENST00000628904 KIF6Q6ZMV9 814 aa9.03□□□□□ -0.96
PKP4-217ENST00000628904 TFIP11Q9UBB9 837 aaKnown RBP9.03□□□□□ -0.96
PKP4-217ENST00000628904 HTATSF1O43719 755 aaKnown RBP9.03□□□□□ -0.96
PKP4-217ENST00000628904 NMIQ13287 307 aaPredicted RBP9.03□□□□□ -0.96
PKP4-217ENST00000628904 DNTTIP2Q5QJE6 756 aaKnown RBP9.03□□□□□ -0.96
PKP4-217ENST00000628904 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.03□□□□□ -0.96
PKP4-217ENST00000628904 OVOS2A0A0J9YW53 1432 aa9.02□□□□□ -0.96
PKP4-217ENST00000628904 OVOS2Q6IE36 1432 aa9.02□□□□□ -0.96
PKP4-217ENST00000628904 TULP1O00294 542 aaPredicted RBP9.02□□□□□ -0.97
PKP4-217ENST00000628904 EXOC5O00471 708 aa9.02□□□□□ -0.97
PKP4-217ENST00000628904 HCLS1P14317 486 aaPredicted RBP9.02□□□□□ -0.97
PKP4-217ENST00000628904 PTH1RQ03431 593 aa9.02□□□□□ -0.97
PKP4-217ENST00000628904 L1TD1Q5T7N2 865 aaKnown RBP9.02□□□□□ -0.97
PKP4-217ENST00000628904 NGLY1Q96IV0 654 aa9.02□□□□□ -0.97
PKP4-217ENST00000628904 ISY1Q9ULR0 285 aaKnown RBP9.02□□□□□ -0.97
PKP4-217ENST00000628904 H3BQV1 296 aa9.02□□□□□ -0.97
PKP4-217ENST00000628904 PHF14O94880 888 aa9.02□□□□□ -0.97
PKP4-217ENST00000628904 ATP2B1P20020 1258 aa9.02□□□□□ -0.97
PKP4-217ENST00000628904 IFFO2Q5TF58 517 aa9.02□□□□□ -0.97
PKP4-217ENST00000628904 RASEFQ8IZ41 740 aa9.02□□□□□ -0.97
PKP4-217ENST00000628904 DCAF5Q96JK2 942 aa9.02□□□□□ -0.97
PKP4-217ENST00000628904 PUS3Q9BZE2 481 aaKnown RBP9.02□□□□□ -0.97
PKP4-217ENST00000628904 PDRG1Q9NUG6 133 aa9.02□□□□□ -0.97
PKP4-217ENST00000628904 CEP126Q9P2H0 1117 aa9.02□□□□□ -0.97
PKP4-217ENST00000628904 HDAC5Q9UQL6 1122 aa9.02□□□□□ -0.97
PKP4-217ENST00000628904 BAG4O95429 457 aaKnown RBP9.02□□□□□ -0.97
PKP4-217ENST00000628904 FAM184AQ8NB25 1140 aa9.02□□□□□ -0.97
PKP4-217ENST00000628904 PIBF1Q8WXW3 757 aa9.02□□□□□ -0.97
PKP4-217ENST00000628904 CRB1P82279 1406 aa9.01□□□□□ -0.97
PKP4-217ENST00000628904 GCKRQ14397 625 aa9.01□□□□□ -0.97
PKP4-217ENST00000628904 LRRC24Q50LG9 513 aa9.01□□□□□ -0.97
PKP4-217ENST00000628904 METTL24Q5JXM2 366 aa9.01□□□□□ -0.97
PKP4-217ENST00000628904 PI16Q6UXB8 463 aa9.01□□□□□ -0.97
PKP4-217ENST00000628904 CCDC144CPQ8IYA2 1237 aa9.01□□□□□ -0.97
PKP4-217ENST00000628904 ABCF2Q9UG63 623 aa9.01□□□□□ -0.97
PKP4-217ENST00000628904 IGKV5-2P06315 115 aa9.01□□□□□ -0.97
PKP4-217ENST00000628904 RBM25P49756 843 aaKnown RBP9.01□□□□□ -0.97
PKP4-217ENST00000628904 CAMK4Q16566 473 aa9.01□□□□□ -0.97
PKP4-217ENST00000628904 TTC39AQ5SRH9 613 aa9.01□□□□□ -0.97
PKP4-217ENST00000628904 LDHAL6AQ6ZMR3 332 aa9.01□□□□□ -0.97
PKP4-217ENST00000628904 NEURL1BA8MQ27 555 aa9.01□□□□□ -0.97
PKP4-217ENST00000628904 NUCB2P80303 420 aa9.01□□□□□ -0.97
PKP4-217ENST00000628904 KIAA1210Q9ULL0 1709 aa9.01□□□□□ -0.97
PKP4-217ENST00000628904 CYP46A1Q9Y6A2 500 aa9.01□□□□□ -0.97
PKP4-217ENST00000628904 DLC1Q96QB1 1528 aa9□□□□□ -0.97
PKP4-217ENST00000628904 IFIT1P09914 478 aaKnown RBP9□□□□□ -0.97
PKP4-217ENST00000628904 ADCK5Q3MIX3 580 aa9□□□□□ -0.97
PKP4-217ENST00000628904 MEX3CQ5U5Q3 659 aaKnown RBP9□□□□□ -0.97
PKP4-217ENST00000628904 KIF2CQ99661 725 aa9□□□□□ -0.97
PKP4-217ENST00000628904 RBM8AQ9Y5S9 174 aaKnown RBP9□□□□□ -0.97
PKP4-217ENST00000628904 CDC42BPGQ6DT37 1551 aa9□□□□□ -0.97
PKP4-217ENST00000628904 SPATA31D1Q6ZQQ2 1576 aa9□□□□□ -0.97
PKP4-217ENST00000628904 AK2P54819 239 aa9□□□□□ -0.97
PKP4-217ENST00000628904 CWC25Q9NXE8 425 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms