RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CCDC61Q9Y6R9 512 aa12.33□□□□□ -0.44
VPS11-207ENST00000620429 KIF20BQ96Q89 1820 aa12.33□□□□□ -0.44
VPS11-207ENST00000620429 TNNT1P13805 278 aa12.33□□□□□ -0.44
VPS11-207ENST00000620429 RNF20Q5VTR2 975 aa12.33□□□□□ -0.44
VPS11-207ENST00000620429 SIRT2Q8IXJ6 389 aa12.33□□□□□ -0.44
VPS11-207ENST00000620429 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.33□□□□□ -0.44
VPS11-207ENST00000620429 A0A1B0GUL7 405 aa12.32□□□□□ -0.44
VPS11-207ENST00000620429 ATP2B1P20020 1258 aa12.32□□□□□ -0.44
VPS11-207ENST00000620429 PRKAR2BP31323 418 aa12.32□□□□□ -0.44
VPS11-207ENST00000620429 GSCP56915 257 aaPredicted RBP12.32□□□□□ -0.44
VPS11-207ENST00000620429 TSGA10IPQ3SY00 556 aa12.32□□□□□ -0.44
VPS11-207ENST00000620429 KRBA2Q6ZNG9 492 aa12.32□□□□□ -0.44
VPS11-207ENST00000620429 SRLQ86TD4 932 aa12.32□□□□□ -0.44
VPS11-207ENST00000620429 ZNF428Q96B54 188 aa12.32□□□□□ -0.44
VPS11-207ENST00000620429 PHACTR3Q96KR7 559 aa12.32□□□□□ -0.44
VPS11-207ENST00000620429 CFAP44Q96MT7 982 aa12.32□□□□□ -0.44
VPS11-207ENST00000620429 PTPRCP08575 1304 aa12.32□□□□□ -0.44
VPS11-207ENST00000620429 XRN1Q8IZH2 1706 aaKnown RBP12.32□□□□□ -0.44
VPS11-207ENST00000620429 ELL2O00472 640 aaPredicted RBP12.31□□□□□ -0.44
VPS11-207ENST00000620429 MRPL50Q8N5N7 158 aaKnown RBP12.31□□□□□ -0.44
VPS11-207ENST00000620429 MNS1Q8NEH6 495 aa12.31□□□□□ -0.44
VPS11-207ENST00000620429 MED4Q9NPJ6 270 aa12.31□□□□□ -0.44
VPS11-207ENST00000620429 TECPR2O15040 1411 aa12.31□□□□□ -0.44
VPS11-207ENST00000620429 EDC4Q6P2E9 1401 aaKnown RBP12.31□□□□□ -0.44
VPS11-207ENST00000620429 GSPT1P15170 499 aaKnown RBP12.31□□□□□ -0.44
VPS11-207ENST00000620429 ERO1AQ96HE7 468 aa12.31□□□□□ -0.44
VPS11-207ENST00000620429 THUMPD2Q9BTF0 503 aaKnown RBP12.31□□□□□ -0.44
VPS11-207ENST00000620429 LCMT1Q9UIC8 334 aa12.31□□□□□ -0.44
VPS11-207ENST00000620429 NHSL1Q5SYE7 1610 aa12.31□□□□□ -0.44
VPS11-207ENST00000620429 VAMP4O75379 141 aa12.31□□□□□ -0.44
VPS11-207ENST00000620429 SWT1Q5T5J6 900 aaKnown RBP12.31□□□□□ -0.44
VPS11-207ENST00000620429 GPATCH11Q8N954 259 aa12.31□□□□□ -0.44
VPS11-207ENST00000620429 PTPRUQ92729 1446 aa12.3□□□□□ -0.44
VPS11-207ENST00000620429 TMED8Q6PL24 325 aaPredicted RBP12.3□□□□□ -0.44
VPS11-207ENST00000620429 CCDC91Q7Z6B0 441 aa12.3□□□□□ -0.44
VPS11-207ENST00000620429 CADPS2Q86UW7 1296 aa12.3□□□□□ -0.44
VPS11-207ENST00000620429 ZGPATQ8N5A5 531 aaKnown RBP12.3□□□□□ -0.44
VPS11-207ENST00000620429 TSPYL6Q8N831 410 aa12.3□□□□□ -0.44
VPS11-207ENST00000620429 NEK11Q8NG66 645 aa12.3□□□□□ -0.44
VPS11-207ENST00000620429 ARHGAP45Q92619 1136 aa12.3□□□□□ -0.44
VPS11-207ENST00000620429 C16orf45Q96MC5 204 aaPredicted RBP12.3□□□□□ -0.44
VPS11-207ENST00000620429 CXorf56Q9H5V9 222 aa12.3□□□□□ -0.44
VPS11-207ENST00000620429 SLAIN2Q9P270 581 aa12.3□□□□□ -0.44
VPS11-207ENST00000620429 TPM4P67936 248 aa12.3□□□□□ -0.44
VPS11-207ENST00000620429 ZSCAN26Q16670 478 aa12.3□□□□□ -0.44
VPS11-207ENST00000620429 ZNF772Q68DY9 489 aaPredicted RBP12.3□□□□□ -0.44
VPS11-207ENST00000620429 TOMM22Q9NS69 142 aa12.3□□□□□ -0.44
VPS11-207ENST00000620429 FHOD1Q9Y613 1164 aa12.3□□□□□ -0.44
VPS11-207ENST00000620429 PLEKHG2Q9H7P9 1386 aa12.3□□□□□ -0.44
VPS11-207ENST00000620429 FCHSD2O94868 740 aa12.29□□□□□ -0.44
VPS11-207ENST00000620429 BRD1O95696 1058 aa12.29□□□□□ -0.44
VPS11-207ENST00000620429 HCLS1P14317 486 aaPredicted RBP12.29□□□□□ -0.44
VPS11-207ENST00000620429 H2AFXP16104 143 aaPredicted RBP12.29□□□□□ -0.44
VPS11-207ENST00000620429 NOM1Q5C9Z4 860 aaKnown RBP12.29□□□□□ -0.44
VPS11-207ENST00000620429 CCDC183Q5T5S1 534 aa12.29□□□□□ -0.44
VPS11-207ENST00000620429 PLEKHM2Q8IWE5 1019 aa12.29□□□□□ -0.44
VPS11-207ENST00000620429 CCDC191Q8NCU4 936 aa12.29□□□□□ -0.44
VPS11-207ENST00000620429 COG3Q96JB2 828 aa12.29□□□□□ -0.44
VPS11-207ENST00000620429 RAI14Q9P0K7 980 aa12.29□□□□□ -0.44
VPS11-207ENST00000620429 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.29□□□□□ -0.44
VPS11-207ENST00000620429 HTATSF1O43719 755 aaKnown RBP12.29□□□□□ -0.44
VPS11-207ENST00000620429 IL13P35225 146 aa12.29□□□□□ -0.44
VPS11-207ENST00000620429 SUGP1Q8IWZ8 645 aaKnown RBP12.29□□□□□ -0.44
VPS11-207ENST00000620429 IQUBQ8NA54 791 aa12.29□□□□□ -0.44
VPS11-207ENST00000620429 DEF6Q9H4E7 631 aa12.29□□□□□ -0.44
VPS11-207ENST00000620429 ZNF215Q9UL58 517 aaPredicted RBP12.29□□□□□ -0.44
VPS11-207ENST00000620429 GPS2Q13227 327 aa12.28□□□□□ -0.44
VPS11-207ENST00000620429 TTC31Q49AM3 519 aaPredicted RBP12.28□□□□□ -0.44
VPS11-207ENST00000620429 CHAMP1Q96JM3 812 aa12.28□□□□□ -0.44
VPS11-207ENST00000620429 USP26Q9BXU7 913 aa12.28□□□□□ -0.44
VPS11-207ENST00000620429 RRP15Q9Y3B9 282 aaKnown RBP12.28□□□□□ -0.44
VPS11-207ENST00000620429 LRRFIP2Q9Y608 721 aaKnown RBP12.28□□□□□ -0.44
VPS11-207ENST00000620429 CDC42BPGQ6DT37 1551 aa12.28□□□□□ -0.44
VPS11-207ENST00000620429 PTCH1Q13635 1447 aa12.28□□□□□ -0.44
VPS11-207ENST00000620429 AP5Z1O43299 807 aa12.28□□□□□ -0.44
VPS11-207ENST00000620429 PLA2G4AP47712 749 aa12.28□□□□□ -0.44
VPS11-207ENST00000620429 FBXO18Q8NFZ0 1043 aa12.28□□□□□ -0.44
VPS11-207ENST00000620429 DRC1Q96MC2 740 aa12.28□□□□□ -0.44
VPS11-207ENST00000620429 V9GYY5 206 aaPredicted RBP12.28□□□□□ -0.44
VPS11-207ENST00000620429 ABCC4O15439 1325 aa12.27□□□□□ -0.44
VPS11-207ENST00000620429 ACEP12821 1306 aa12.27□□□□□ -0.44
VPS11-207ENST00000620429 ST18O60284 1047 aa12.27□□□□□ -0.44
VPS11-207ENST00000620429 TTC22Q5TAA0 569 aa12.27□□□□□ -0.44
VPS11-207ENST00000620429 GOLGA5Q8TBA6 731 aa12.27□□□□□ -0.44
VPS11-207ENST00000620429 AMOTL2Q9Y2J4 779 aa12.27□□□□□ -0.44
VPS11-207ENST00000620429 KNDC1Q76NI1 1749 aa12.27□□□□□ -0.45
VPS11-207ENST00000620429 MAGEA9P43362 315 aa12.27□□□□□ -0.45
VPS11-207ENST00000620429 CEP135Q66GS9 1140 aa12.27□□□□□ -0.45
VPS11-207ENST00000620429 INTS3Q68E01 1043 aaKnown RBP12.27□□□□□ -0.45
VPS11-207ENST00000620429 C19orf44Q9H6X5 657 aa12.27□□□□□ -0.45
VPS11-207ENST00000620429 MAP2P11137 1827 aaKnown RBP12.26□□□□□ -0.45
VPS11-207ENST00000620429 MX1P20591 662 aa12.26□□□□□ -0.45
VPS11-207ENST00000620429 ELF2Q15723 593 aa12.26□□□□□ -0.45
VPS11-207ENST00000620429 C16orf71Q8IYS4 520 aaPredicted RBP12.26□□□□□ -0.45
VPS11-207ENST00000620429 GTF3C6Q969F1 213 aa12.26□□□□□ -0.45
VPS11-207ENST00000620429 FUCA2Q9BTY2 467 aa12.26□□□□□ -0.45
VPS11-207ENST00000620429 SUFUQ9UMX1 484 aa12.26□□□□□ -0.45
VPS11-207ENST00000620429 ERBB3P21860 1342 aa12.26□□□□□ -0.45
VPS11-207ENST00000620429 PNMA6AP0CW24 399 aaPredicted RBP12.26□□□□□ -0.45
VPS11-207ENST00000620429 GNAI1P63096 354 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms