RNA–Protein interactions for RNA: ENST00000611841.1

EP400-208, Transcript of E1A binding protein p400, human

TSL 5

Gene EP400, Length 3,129 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EP400-208	ENST00000611841	ZC3H6	P61129	1189 aa	Known RBP	13.79	□□□□□ -0.2
EP400-208	ENST00000611841	CNTROB	Q8N137	903 aa		13.79	□□□□□ -0.2
EP400-208	ENST00000611841	SETD1B	Q9UPS6	1966 aa	Known RBP	13.79	□□□□□ -0.2
EP400-208	ENST00000611841	PEAK1	Q9H792	1746 aa		13.79	□□□□□ -0.2
EP400-208	ENST00000611841	RAB11FIP3	O75154	756 aa		13.79	□□□□□ -0.2
EP400-208	ENST00000611841	SIL1	Q9H173	461 aa		13.79	□□□□□ -0.2
EP400-208	ENST00000611841	IFIT2	P09913	472 aa	Known RBP	13.79	□□□□□ -0.2
EP400-208	ENST00000611841	STAP2	Q9UGK3	403 aa		13.79	□□□□□ -0.2
EP400-208	ENST00000611841	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
EP400-208	ENST00000611841	RIMS1	Q86UR5	1692 aa	Known RBP	13.78	□□□□□ -0.2
EP400-208	ENST00000611841	PROSER3	Q2NL68	480 aa		13.78	□□□□□ -0.2
EP400-208	ENST00000611841	CLEC17A	Q6ZS10	378 aa		13.78	□□□□□ -0.2
EP400-208	ENST00000611841	GC	P02774	474 aa		13.78	□□□□□ -0.2
EP400-208	ENST00000611841	U2AF2	P26368	475 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
EP400-208	ENST00000611841	MCM5	P33992	734 aa		13.78	□□□□□ -0.2
EP400-208	ENST00000611841	BEND3	Q5T5X7	828 aa		13.78	□□□□□ -0.2
EP400-208	ENST00000611841	SALL3	Q9BXA9	1300 aa		13.78	□□□□□ -0.2
EP400-208	ENST00000611841	MYL6B	P14649	208 aa		13.77	□□□□□ -0.2
EP400-208	ENST00000611841	TMEM63C	Q9P1W3	806 aa		13.77	□□□□□ -0.2
EP400-208	ENST00000611841	DBF4	Q9UBU7	674 aa	Predicted RBP	13.77	□□□□□ -0.2
EP400-208	ENST00000611841	KCNH5	Q8NCM2	988 aa		13.77	□□□□□ -0.21
EP400-208	ENST00000611841	KIF3A	Q9Y496	699 aa		13.77	□□□□□ -0.21
EP400-208	ENST00000611841	SLC39A6	Q13433	755 aa		13.77	□□□□□ -0.21
EP400-208	ENST00000611841	PDCL2	Q8N4E4	241 aa		13.77	□□□□□ -0.21
EP400-208	ENST00000611841	HSP90AB4P	Q58FF6	505 aa		13.76	□□□□□ -0.21
EP400-208	ENST00000611841	TAF7L	Q5H9L4	462 aa		13.76	□□□□□ -0.21
EP400-208	ENST00000611841	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.76	□□□□□ -0.21
EP400-208	ENST00000611841	ANAPC15	P60006	121 aa		13.76	□□□□□ -0.21
EP400-208	ENST00000611841	AKAP4	Q5JQC9	854 aa		13.76	□□□□□ -0.21
EP400-208	ENST00000611841	AACS	Q86V21	672 aa		13.76	□□□□□ -0.21
EP400-208	ENST00000611841	ANKRD24	Q8TF21	1146 aa		13.76	□□□□□ -0.21
EP400-208	ENST00000611841	CHMP4A	Q9BY43	222 aa		13.76	□□□□□ -0.21
EP400-208	ENST00000611841	NLRP2	Q9NX02	1062 aa		13.76	□□□□□ -0.21
EP400-208	ENST00000611841	CCDC9	Q9Y3X0	531 aa	Known RBP	13.76	□□□□□ -0.21
EP400-208	ENST00000611841	AKAP12	Q02952	1782 aa		13.75	□□□□□ -0.21
EP400-208	ENST00000611841	RASEF	Q8IZ41	740 aa		13.75	□□□□□ -0.21
EP400-208	ENST00000611841	BABAM1	Q9NWV8	329 aa		13.75	□□□□□ -0.21
EP400-208	ENST00000611841	UBR1	Q8IWV7	1749 aa		13.75	□□□□□ -0.21
EP400-208	ENST00000611841	CAST	P20810	708 aa	Known RBP	13.75	□□□□□ -0.21
EP400-208	ENST00000611841	PIP4K2A	P48426	406 aa	Predicted RBP	13.75	□□□□□ -0.21
EP400-208	ENST00000611841	RIC3	Q7Z5B4	369 aa		13.75	□□□□□ -0.21
EP400-208	ENST00000611841	RNMT	O43148	476 aa	Known RBP	13.75	□□□□□ -0.21
EP400-208	ENST00000611841	PRPF40B	Q6NWY9	871 aa	Known RBP	13.75	□□□□□ -0.21
EP400-208	ENST00000611841	PI4K2B	Q8TCG2	481 aa		13.75	□□□□□ -0.21
EP400-208	ENST00000611841	BCL2L12	Q9HB09	334 aa		13.75	□□□□□ -0.21
EP400-208	ENST00000611841	SGSM2	O43147	1006 aa		13.74	□□□□□ -0.21
EP400-208	ENST00000611841	BRD1	O95696	1058 aa		13.74	□□□□□ -0.21
EP400-208	ENST00000611841	CSB-PGBD3	P0DP91	1061 aa		13.74	□□□□□ -0.21
EP400-208	ENST00000611841	HSPA4	P34932	840 aa		13.74	□□□□□ -0.21
EP400-208	ENST00000611841	PLCB2	Q00722	1185 aa		13.74	□□□□□ -0.21
EP400-208	ENST00000611841	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
EP400-208	ENST00000611841	GLRX3	O76003	335 aa	Known RBP	13.74	□□□□□ -0.21
EP400-208	ENST00000611841	TTC12	Q9H892	705 aa	Predicted RBP	13.74	□□□□□ -0.21
EP400-208	ENST00000611841	SNX14	Q9Y5W7	946 aa		13.74	□□□□□ -0.21
EP400-208	ENST00000611841	GADD45B	O75293	160 aa	Predicted RBP	13.73	□□□□□ -0.21
EP400-208	ENST00000611841	AK2	P54819	239 aa		13.73	□□□□□ -0.21
EP400-208	ENST00000611841	POLA2	Q14181	598 aa		13.73	□□□□□ -0.21
EP400-208	ENST00000611841	DIP2A	Q14689	1571 aa		13.73	□□□□□ -0.21
EP400-208	ENST00000611841	KLHDC4	Q8TBB5	520 aa		13.73	□□□□□ -0.21
EP400-208	ENST00000611841	GPATCH3	Q96I76	525 aa		13.73	□□□□□ -0.21
EP400-208	ENST00000611841	JAKMIP1	Q96N16	626 aa	Known RBP	13.73	□□□□□ -0.21
EP400-208	ENST00000611841	SMC3	Q9UQE7	1217 aa		13.73	□□□□□ -0.21
EP400-208	ENST00000611841	HMGN5	P82970	282 aa	Known RBP	13.73	□□□□□ -0.21
EP400-208	ENST00000611841	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
EP400-208	ENST00000611841	ECHDC1	Q9NTX5	307 aa		13.73	□□□□□ -0.21
EP400-208	ENST00000611841	GIGYF1	O75420	1035 aa	Predicted RBP	13.73	□□□□□ -0.21
EP400-208	ENST00000611841	MBD3	O95983	291 aa		13.73	□□□□□ -0.21
EP400-208	ENST00000611841	CUL4A	Q13619	759 aa		13.73	□□□□□ -0.21
EP400-208	ENST00000611841	AMOT	Q4VCS5	1084 aa		13.73	□□□□□ -0.21
EP400-208	ENST00000611841	RUFY2	Q8WXA3	655 aa		13.73	□□□□□ -0.21
EP400-208	ENST00000611841	BOLA2	Q9H3K6	86 aa		13.73	□□□□□ -0.21
EP400-208	ENST00000611841	NRK	Q7Z2Y5	1582 aa		13.72	□□□□□ -0.21
EP400-208	ENST00000611841	LRSAM1	Q6UWE0	723 aa		13.72	□□□□□ -0.21
EP400-208	ENST00000611841	KSR2	Q6VAB6	950 aa		13.72	□□□□□ -0.21
EP400-208	ENST00000611841	USP48	Q86UV5	1035 aa		13.72	□□□□□ -0.21
EP400-208	ENST00000611841	AXIN2	Q9Y2T1	843 aa		13.72	□□□□□ -0.21
EP400-208	ENST00000611841	WDR33	Q9C0J8	1336 aa	Known RBP	13.72	□□□□□ -0.21
EP400-208	ENST00000611841	FIBP	O43427	364 aa		13.72	□□□□□ -0.21
EP400-208	ENST00000611841	CCDC83	Q8IWF9	413 aa		13.72	□□□□□ -0.21
EP400-208	ENST00000611841	INTS4	Q96HW7	963 aa	Known RBP	13.72	□□□□□ -0.21
EP400-208	ENST00000611841	PRIMPOL	Q96LW4	560 aa		13.72	□□□□□ -0.21
EP400-208	ENST00000611841	PTH1R	Q03431	593 aa		13.71	□□□□□ -0.21
EP400-208	ENST00000611841	PROSER2	Q86WR7	435 aa	Predicted RBP	13.71	□□□□□ -0.21
EP400-208	ENST00000611841	RAPGEF4	Q8WZA2	1011 aa		13.71	□□□□□ -0.21
EP400-208	ENST00000611841	TCEANC2	Q96MN5	208 aa		13.71	□□□□□ -0.21
EP400-208	ENST00000611841	CHMP3	Q9Y3E7	222 aa		13.71	□□□□□ -0.21
EP400-208	ENST00000611841	DDX58	O95786	925 aa	Known RBP	13.71	□□□□□ -0.21
EP400-208	ENST00000611841	LIMCH1	Q9UPQ0	1083 aa		13.71	□□□□□ -0.21
EP400-208	ENST00000611841	VPS37C	A5D8V6	355 aa	Predicted RBP	13.7	□□□□□ -0.22
EP400-208	ENST00000611841	KRT28	Q7Z3Y7	464 aa		13.7	□□□□□ -0.22
EP400-208	ENST00000611841	CNPY2	Q9Y2B0	182 aa		13.7	□□□□□ -0.22
EP400-208	ENST00000611841	RAD50	Q92878	1312 aa		13.7	□□□□□ -0.22
EP400-208	ENST00000611841	NECAB1	Q8N987	351 aa		13.7	□□□□□ -0.22
EP400-208	ENST00000611841	DDX17	Q92841	729 aa	Known RBP	13.7	□□□□□ -0.22
EP400-208	ENST00000611841	SYAP1	Q96A49	352 aa	Predicted RBP	13.7	□□□□□ -0.22
EP400-208	ENST00000611841	LSG1	Q9H089	658 aa	Known RBP	13.7	□□□□□ -0.22
EP400-208	ENST00000611841	ZKSCAN1	P17029	563 aa	Predicted RBP	13.7	□□□□□ -0.22
EP400-208	ENST00000611841	ADCK5	Q3MIX3	580 aa		13.7	□□□□□ -0.22
EP400-208	ENST00000611841	NFATC2IP	Q8NCF5	419 aa		13.7	□□□□□ -0.22
EP400-208	ENST00000611841	SUCLG2	Q96I99	432 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms