RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 GABPB1Q06547 395 aaPredicted RBP11.79□□□□□ -0.52
TCF4-211ENST00000561992 MAP3K11Q16584 847 aa11.79□□□□□ -0.52
TCF4-211ENST00000561992 PI4K2BQ8TCG2 481 aa11.79□□□□□ -0.52
TCF4-211ENST00000561992 KCNF1Q9H3M0 494 aa11.79□□□□□ -0.52
TCF4-211ENST00000561992 CDC25BP30305 580 aa11.78□□□□□ -0.52
TCF4-211ENST00000561992 KRT85P78386 507 aa11.78□□□□□ -0.52
TCF4-211ENST00000561992 NOL8Q76FK4 1167 aaKnown RBP11.78□□□□□ -0.52
TCF4-211ENST00000561992 ZSWIM6Q9HCJ5 1215 aa11.78□□□□□ -0.52
TCF4-211ENST00000561992 DDX19AQ9NUU7 478 aaKnown RBP11.78□□□□□ -0.52
TCF4-211ENST00000561992 HYPKQ9NX55 129 aa11.78□□□□□ -0.52
TCF4-211ENST00000561992 CGNQ9P2M7 1197 aaKnown RBP11.78□□□□□ -0.52
TCF4-211ENST00000561992 PEAK1Q9H792 1746 aa11.78□□□□□ -0.52
TCF4-211ENST00000561992 SBNO1A3KN83 1393 aa11.78□□□□□ -0.52
TCF4-211ENST00000561992 CHD2O14647 1828 aaKnown RBP11.78□□□□□ -0.52
TCF4-211ENST00000561992 TTC21AQ8NDW8 1320 aa11.78□□□□□ -0.52
TCF4-211ENST00000561992 FIBPO43427 364 aa11.78□□□□□ -0.52
TCF4-211ENST00000561992 NEMFO60524 1076 aa11.78□□□□□ -0.52
TCF4-211ENST00000561992 GLRX3O76003 335 aaKnown RBP11.78□□□□□ -0.52
TCF4-211ENST00000561992 RBM43Q6ZSC3 357 aaKnown RBP11.78□□□□□ -0.52
TCF4-211ENST00000561992 UNC5CLQ8IV45 518 aa11.78□□□□□ -0.52
TCF4-211ENST00000561992 ALDH8A1Q9H2A2 487 aaPredicted RBP11.78□□□□□ -0.52
TCF4-211ENST00000561992 LRRFIP2Q9Y608 721 aaKnown RBP11.78□□□□□ -0.52
TCF4-211ENST00000561992 TSHZ3Q63HK5 1081 aa11.77□□□□□ -0.53
TCF4-211ENST00000561992 GIMAP6Q6P9H5 292 aa11.77□□□□□ -0.53
TCF4-211ENST00000561992 SCAND2PQ9GZW5 306 aaPredicted RBP11.77□□□□□ -0.53
TCF4-211ENST00000561992 NUP62CLQ9H1M0 184 aa11.77□□□□□ -0.53
TCF4-211ENST00000561992 PYCARDQ9ULZ3 195 aa11.77□□□□□ -0.53
TCF4-211ENST00000561992 USP6P35125 1406 aa11.77□□□□□ -0.53
TCF4-211ENST00000561992 FLT4P35916 1363 aa11.77□□□□□ -0.53
TCF4-211ENST00000561992 HIP1O00291 1037 aa11.77□□□□□ -0.53
TCF4-211ENST00000561992 HMGB1P09429 215 aaKnown RBP11.77□□□□□ -0.53
TCF4-211ENST00000561992 GJB2P29033 226 aa11.77□□□□□ -0.53
TCF4-211ENST00000561992 CBX1P83916 185 aa11.77□□□□□ -0.53
TCF4-211ENST00000561992 ANKRD1Q15327 319 aa11.77□□□□□ -0.53
TCF4-211ENST00000561992 ATP2B3Q16720 1220 aa11.77□□□□□ -0.53
TCF4-211ENST00000561992 CREBRFQ8IUR6 639 aa11.77□□□□□ -0.53
TCF4-211ENST00000561992 RHPN1Q8TCX5 695 aa11.77□□□□□ -0.53
TCF4-211ENST00000561992 PDRG1Q9NUG6 133 aa11.77□□□□□ -0.53
TCF4-211ENST00000561992 HDAC5Q9UQL6 1122 aa11.77□□□□□ -0.53
TCF4-211ENST00000561992 CYP46A1Q9Y6A2 500 aa11.77□□□□□ -0.53
TCF4-211ENST00000561992 IGSF1Q8N6C5 1336 aa11.76□□□□□ -0.53
TCF4-211ENST00000561992 RGL2O15211 777 aa11.76□□□□□ -0.53
TCF4-211ENST00000561992 MTHFSDQ2M296 383 aaKnown RBP11.76□□□□□ -0.53
TCF4-211ENST00000561992 FBXO31Q5XUX0 539 aaPredicted RBP11.76□□□□□ -0.53
TCF4-211ENST00000561992 TDRD7Q8NHU6 1098 aaKnown RBP11.76□□□□□ -0.53
TCF4-211ENST00000561992 PTPRUQ92729 1446 aa11.76□□□□□ -0.53
TCF4-211ENST00000561992 USP44Q9H0E7 712 aa11.76□□□□□ -0.53
TCF4-211ENST00000561992 PRDM10Q9NQV6 1147 aa11.76□□□□□ -0.53
TCF4-211ENST00000561992 FMN2Q9NZ56 1722 aa11.76□□□□□ -0.53
TCF4-211ENST00000561992 TYRO3Q06418 890 aa11.75□□□□□ -0.53
TCF4-211ENST00000561992 GPATCH3Q96I76 525 aa11.75□□□□□ -0.53
TCF4-211ENST00000561992 MAP3K19Q56UN5 1328 aa11.75□□□□□ -0.53
TCF4-211ENST00000561992 NPHP3Q7Z494 1330 aa11.75□□□□□ -0.53
TCF4-211ENST00000561992 GIGYF1O75420 1035 aaPredicted RBP11.75□□□□□ -0.53
TCF4-211ENST00000561992 HOXB7P09629 217 aa11.75□□□□□ -0.53
TCF4-211ENST00000561992 ZKSCAN1P17029 563 aaPredicted RBP11.75□□□□□ -0.53
TCF4-211ENST00000561992 PSMA5P28066 241 aa11.75□□□□□ -0.53
TCF4-211ENST00000561992 DNM1Q05193 864 aaKnown RBP11.75□□□□□ -0.53
TCF4-211ENST00000561992 FOXD4L6Q3SYB3 417 aaPredicted RBP11.75□□□□□ -0.53
TCF4-211ENST00000561992 FOXD4L3Q6VB84 417 aaPredicted RBP11.75□□□□□ -0.53
TCF4-211ENST00000561992 PLA2G4DQ86XP0 818 aa11.75□□□□□ -0.53
TCF4-211ENST00000561992 SNRKQ9NRH2 765 aa11.75□□□□□ -0.53
TCF4-211ENST00000561992 METP08581 1390 aa11.75□□□□□ -0.53
TCF4-211ENST00000561992 AP5Z1O43299 807 aa11.74□□□□□ -0.53
TCF4-211ENST00000561992 SURF6O75683 361 aaKnown RBP11.74□□□□□ -0.53
TCF4-211ENST00000561992 CASTP20810 708 aaKnown RBP11.74□□□□□ -0.53
TCF4-211ENST00000561992 BRD2P25440 801 aaKnown RBP11.74□□□□□ -0.53
TCF4-211ENST00000561992 C17orf53Q8N3J3 647 aaPredicted RBP11.74□□□□□ -0.53
TCF4-211ENST00000561992 MRVI1Q9Y6F6 885 aa11.74□□□□□ -0.53
TCF4-211ENST00000561992 DIP2AQ14689 1571 aa11.74□□□□□ -0.53
TCF4-211ENST00000561992 PRR36Q9H6K5 1346 aa11.74□□□□□ -0.53
TCF4-211ENST00000561992 ECM2O94769 699 aaPredicted RBP11.74□□□□□ -0.53
TCF4-211ENST00000561992 ERC1Q8IUD2 1116 aa11.74□□□□□ -0.53
TCF4-211ENST00000561992 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
TCF4-211ENST00000561992 IL25Q9H293 177 aa11.74□□□□□ -0.53
TCF4-211ENST00000561992 ZHX1Q9UKY1 873 aaPredicted RBP11.74□□□□□ -0.53
TCF4-211ENST00000561992 GNAT3A8MTJ3 354 aa11.73□□□□□ -0.53
TCF4-211ENST00000561992 ZNF75DP51815 510 aa11.73□□□□□ -0.53
TCF4-211ENST00000561992 NCBP1Q09161 790 aaKnown RBP11.73□□□□□ -0.53
TCF4-211ENST00000561992 MTX1Q13505 466 aa11.73□□□□□ -0.53
TCF4-211ENST00000561992 DHX8Q14562 1220 aaKnown RBP11.73□□□□□ -0.53
TCF4-211ENST00000561992 HSP90AB2PQ58FF8 381 aa11.73□□□□□ -0.53
TCF4-211ENST00000561992 RNF20Q5VTR2 975 aa11.73□□□□□ -0.53
TCF4-211ENST00000561992 SARM1Q6SZW1 724 aa11.73□□□□□ -0.53
TCF4-211ENST00000561992 PPP1R42Q7Z4L9 355 aa11.73□□□□□ -0.53
TCF4-211ENST00000561992 CLSTN2Q9H4D0 955 aa11.73□□□□□ -0.53
TCF4-211ENST00000561992 KCND1Q9NSA2 647 aa11.73□□□□□ -0.53
TCF4-211ENST00000561992 KIF2AO00139 706 aaPredicted RBP11.72□□□□□ -0.53
TCF4-211ENST00000561992 NUTM1Q86Y26 1132 aa11.72□□□□□ -0.53
TCF4-211ENST00000561992 CCDC83Q8IWF9 413 aa11.72□□□□□ -0.53
TCF4-211ENST00000561992 CCDC112Q8NEF3 446 aa11.72□□□□□ -0.53
TCF4-211ENST00000561992 TSC1Q92574 1164 aa11.72□□□□□ -0.53
TCF4-211ENST00000561992 TNMDQ9H2S6 317 aa11.72□□□□□ -0.53
TCF4-211ENST00000561992 CTNNA3Q9UI47 895 aa11.72□□□□□ -0.53
TCF4-211ENST00000561992 MORC2Q9Y6X9 1032 aaPredicted RBP11.72□□□□□ -0.53
TCF4-211ENST00000561992 PTGS1P23219 599 aa11.72□□□□□ -0.53
TCF4-211ENST00000561992 NECTIN1Q15223 517 aa11.72□□□□□ -0.53
TCF4-211ENST00000561992 ZSCAN25Q6NSZ9 544 aa11.72□□□□□ -0.53
TCF4-211ENST00000561992 EVI5LQ96CN4 794 aa11.72□□□□□ -0.53
TCF4-211ENST00000561992 JAKMIP1Q96N16 626 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms