RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 SCHIP1Q9P0W5 487 aaPredicted RBP7.86□□□□□ -1.15
CASC4-206ENST00000558847 BACH1O14867 736 aa7.85□□□□□ -1.15
CASC4-206ENST00000558847 BNIP3LO60238 219 aa7.85□□□□□ -1.15
CASC4-206ENST00000558847 B4GALNT3Q6L9W6 998 aa7.85□□□□□ -1.15
CASC4-206ENST00000558847 FIGNL1Q6PIW4 674 aa7.85□□□□□ -1.15
CASC4-206ENST00000558847 C1orf229Q6ZS94 237 aaPredicted RBP7.85□□□□□ -1.15
CASC4-206ENST00000558847 TSEN2Q8NCE0 465 aaKnown RBP7.85□□□□□ -1.15
CASC4-206ENST00000558847 CCDC9Q9Y3X0 531 aaKnown RBP7.85□□□□□ -1.15
CASC4-206ENST00000558847 SEC13P55735 322 aa7.84□□□□□ -1.15
CASC4-206ENST00000558847 CTBSQ01459 385 aa7.84□□□□□ -1.15
CASC4-206ENST00000558847 UBAP2LQ14157 1087 aaKnown RBP7.84□□□□□ -1.15
CASC4-206ENST00000558847 ELOAQ14241 798 aaKnown RBP7.84□□□□□ -1.15
CASC4-206ENST00000558847 ARSJQ5FYB0 599 aaPredicted RBP7.84□□□□□ -1.15
CASC4-206ENST00000558847 TNS4Q8IZW8 715 aa7.84□□□□□ -1.15
CASC4-206ENST00000558847 NIFKQ9BYG3 293 aaKnown RBP7.84□□□□□ -1.15
CASC4-206ENST00000558847 CRISPLD1Q9H336 500 aa7.84□□□□□ -1.15
CASC4-206ENST00000558847 GGA1Q9UJY5 639 aa7.84□□□□□ -1.15
CASC4-206ENST00000558847 NOVA2Q9UNW9 492 aaKnown RBP7.84□□□□□ -1.15
CASC4-206ENST00000558847 CDK2AP1O14519 115 aa7.83□□□□□ -1.16
CASC4-206ENST00000558847 C2CD2LO14523 706 aa7.83□□□□□ -1.16
CASC4-206ENST00000558847 BRD1O95696 1058 aa7.83□□□□□ -1.16
CASC4-206ENST00000558847 GRIN2CQ14957 1233 aa7.83□□□□□ -1.16
CASC4-206ENST00000558847 AEBP1Q8IUX7 1158 aa7.83□□□□□ -1.16
CASC4-206ENST00000558847 STK32AQ8WU08 396 aa7.83□□□□□ -1.16
CASC4-206ENST00000558847 KCNA1Q09470 495 aa7.82□□□□□ -1.16
CASC4-206ENST00000558847 SLC9A9Q8IVB4 645 aa7.82□□□□□ -1.16
CASC4-206ENST00000558847 C1orf216Q8TAB5 229 aa7.82□□□□□ -1.16
CASC4-206ENST00000558847 ZDHHC1Q8WTX9 485 aa7.82□□□□□ -1.16
CASC4-206ENST00000558847 ZCCHC2Q9C0B9 1178 aaKnown RBP7.82□□□□□ -1.16
CASC4-206ENST00000558847 TSPAN10Q9H1Z9 355 aaPredicted RBP7.82□□□□□ -1.16
CASC4-206ENST00000558847 PCDHGC4Q9Y5F7 938 aa7.82□□□□□ -1.16
CASC4-206ENST00000558847 GJA3Q9Y6H8 435 aa7.82□□□□□ -1.16
CASC4-206ENST00000558847 DCDC2BA2VCK2 349 aa7.81□□□□□ -1.16
CASC4-206ENST00000558847 PIK3R2O00459 728 aa7.81□□□□□ -1.16
CASC4-206ENST00000558847 ATXN7O15265 892 aaPredicted RBP7.81□□□□□ -1.16
CASC4-206ENST00000558847 ITGB2P05107 769 aa7.81□□□□□ -1.16
CASC4-206ENST00000558847 NBPF1Q3BBV0 1214 aa7.81□□□□□ -1.16
CASC4-206ENST00000558847 POTEAQ6S8J7 498 aa7.81□□□□□ -1.16
CASC4-206ENST00000558847 SLCO4C1Q6ZQN7 724 aa7.81□□□□□ -1.16
CASC4-206ENST00000558847 KRBA1A5PL33 1030 aa7.8□□□□□ -1.16
CASC4-206ENST00000558847 NEURL1BA8MQ27 555 aa7.8□□□□□ -1.16
CASC4-206ENST00000558847 C21orf2O43822 256 aa7.8□□□□□ -1.16
CASC4-206ENST00000558847 ADAM23O75077 832 aa7.8□□□□□ -1.16
CASC4-206ENST00000558847 PROCP04070 461 aa7.8□□□□□ -1.16
CASC4-206ENST00000558847 TATP17735 454 aaPredicted RBP7.8□□□□□ -1.16
CASC4-206ENST00000558847 ATP4AP20648 1035 aa7.8□□□□□ -1.16
CASC4-206ENST00000558847 FAM69CQ0P6D2 419 aa7.8□□□□□ -1.16
CASC4-206ENST00000558847 TBCELQ5QJ74 424 aa7.8□□□□□ -1.16
CASC4-206ENST00000558847 NLRP8Q86W28 1048 aa7.8□□□□□ -1.16
CASC4-206ENST00000558847 NDFIP2Q9NV92 336 aa7.8□□□□□ -1.16
CASC4-206ENST00000558847 CABP1Q9NZU7 370 aa7.8□□□□□ -1.16
CASC4-206ENST00000558847 RBM19Q9Y4C8 960 aaKnown RBP7.8□□□□□ -1.16
CASC4-206ENST00000558847 A0A1W2PNR3 127 aa7.79□□□□□ -1.16
CASC4-206ENST00000558847 KHNYNO15037 678 aaKnown RBP7.79□□□□□ -1.16
CASC4-206ENST00000558847 ARAFP10398 606 aa7.79□□□□□ -1.16
CASC4-206ENST00000558847 ALYREFQ86V81 257 aaKnown RBP7.79□□□□□ -1.16
CASC4-206ENST00000558847 EML1O00423 815 aa7.78□□□□□ -1.16
CASC4-206ENST00000558847 COL8A1P27658 744 aa7.78□□□□□ -1.16
CASC4-206ENST00000558847 TEAD4Q15561 434 aa7.78□□□□□ -1.16
CASC4-206ENST00000558847 TMEM164Q5U3C3 297 aa7.78□□□□□ -1.16
CASC4-206ENST00000558847 BICDL1Q6ZP65 573 aa7.78□□□□□ -1.16
CASC4-206ENST00000558847 FAM200AQ8TCP9 573 aa7.78□□□□□ -1.16
CASC4-206ENST00000558847 BTBD6Q96KE9 485 aa7.78□□□□□ -1.16
CASC4-206ENST00000558847 GNB5O14775 395 aa7.77□□□□□ -1.17
CASC4-206ENST00000558847 MAPTP10636 758 aaKnown RBP7.77□□□□□ -1.17
CASC4-206ENST00000558847 EPXP11678 715 aa7.77□□□□□ -1.17
CASC4-206ENST00000558847 CD33P20138 364 aa7.77□□□□□ -1.17
CASC4-206ENST00000558847 HIRAP54198 1017 aaPredicted RBP7.77□□□□□ -1.17
CASC4-206ENST00000558847 PSMA6P60900 246 aaKnown RBP7.77□□□□□ -1.17
CASC4-206ENST00000558847 SH3PXD2AQ5TCZ1 1133 aa7.77□□□□□ -1.17
CASC4-206ENST00000558847 SUV39H2Q9H5I1 410 aa7.77□□□□□ -1.17
CASC4-206ENST00000558847 K7ELQ4 463 aaPredicted RBP7.76□□□□□ -1.17
CASC4-206ENST00000558847 LGR5O75473 907 aa7.76□□□□□ -1.17
CASC4-206ENST00000558847 ADH6P28332 368 aa7.76□□□□□ -1.17
CASC4-206ENST00000558847 BAG6P46379 1132 aa7.76□□□□□ -1.17
CASC4-206ENST00000558847 SWI5Q1ZZU3 235 aa7.76□□□□□ -1.17
CASC4-206ENST00000558847 LINC00114Q6XXX2 140 aa7.76□□□□□ -1.17
CASC4-206ENST00000558847 ZDHHC3Q9NYG2 299 aa7.76□□□□□ -1.17
CASC4-206ENST00000558847 PRR12Q9ULL5 1215 aa7.76□□□□□ -1.17
CASC4-206ENST00000558847 PARP3Q9Y6F1 533 aa7.76□□□□□ -1.17
CASC4-206ENST00000558847 IGFBP4P22692 258 aa7.75□□□□□ -1.17
CASC4-206ENST00000558847 WEE1P30291 646 aa7.75□□□□□ -1.17
CASC4-206ENST00000558847 TXLNAP40222 546 aa7.75□□□□□ -1.17
CASC4-206ENST00000558847 TNP2Q05952 138 aa7.75□□□□□ -1.17
CASC4-206ENST00000558847 CHSY3Q70JA7 882 aa7.75□□□□□ -1.17
CASC4-206ENST00000558847 STAG2Q8N3U4 1231 aa7.75□□□□□ -1.17
CASC4-206ENST00000558847 L3MBTL2Q969R5 705 aa7.75□□□□□ -1.17
CASC4-206ENST00000558847 NOP53Q9NZM5 478 aaKnown RBP7.75□□□□□ -1.17
CASC4-206ENST00000558847 SLAIN2Q9P270 581 aa7.75□□□□□ -1.17
CASC4-206ENST00000558847 TMEM88BA6NKF7 163 aa7.74□□□□□ -1.17
CASC4-206ENST00000558847 PPP1R12BO60237 982 aaPredicted RBP7.74□□□□□ -1.17
CASC4-206ENST00000558847 NOS2P35228 1153 aa7.74□□□□□ -1.17
CASC4-206ENST00000558847 OCLNQ16625 522 aa7.74□□□□□ -1.17
CASC4-206ENST00000558847 SCG3Q8WXD2 468 aaKnown RBP7.74□□□□□ -1.17
CASC4-206ENST00000558847 C2orf49Q9BVC5 232 aaPredicted RBP7.74□□□□□ -1.17
CASC4-206ENST00000558847 SERTM1A2A2V5 107 aa7.73□□□□□ -1.17
CASC4-206ENST00000558847 FURINP09958 794 aa7.73□□□□□ -1.17
CASC4-206ENST00000558847 PCBP4P57723 403 aaKnown RBP7.73□□□□□ -1.17
CASC4-206ENST00000558847 TMCO4Q5TGY1 634 aa7.73□□□□□ -1.17
CASC4-206ENST00000558847 GAS2L2Q8NHY3 880 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms