RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 TSNAXIP1Q2TAA8 658 aa8.31□□□□□ -1.08
CPSF6-206ENST00000550987 TMEM214Q6NUQ4 689 aaKnown RBP8.31□□□□□ -1.08
CPSF6-206ENST00000550987 DMRTB1Q96MA1 342 aa8.31□□□□□ -1.08
CPSF6-206ENST00000550987 QTRT2Q9H974 415 aaKnown RBP8.31□□□□□ -1.08
CPSF6-206ENST00000550987 DCAF1Q9Y4B6 1507 aa8.3□□□□□ -1.08
CPSF6-206ENST00000550987 ITGAEP38570 1179 aa8.3□□□□□ -1.08
CPSF6-206ENST00000550987 CLN3Q13286 438 aa8.3□□□□□ -1.08
CPSF6-206ENST00000550987 TEAD4Q15561 434 aa8.3□□□□□ -1.08
CPSF6-206ENST00000550987 C11orf91Q3C1V1 193 aa8.3□□□□□ -1.08
CPSF6-206ENST00000550987 L3MBTL2Q969R5 705 aa8.3□□□□□ -1.08
CPSF6-206ENST00000550987 ZSCAN10Q96SZ4 725 aaPredicted RBP8.3□□□□□ -1.08
CPSF6-206ENST00000550987 PRKD2Q9BZL6 878 aa8.3□□□□□ -1.08
CPSF6-206ENST00000550987 MRS2Q9HD23 443 aa8.3□□□□□ -1.08
CPSF6-206ENST00000550987 PARP3Q9Y6F1 533 aa8.3□□□□□ -1.08
CPSF6-206ENST00000550987 TNFRSF10BO14763 440 aa8.29□□□□□ -1.08
CPSF6-206ENST00000550987 TREHO43280 583 aa8.29□□□□□ -1.08
CPSF6-206ENST00000550987 FZD6O60353 706 aa8.29□□□□□ -1.08
CPSF6-206ENST00000550987 LDHBP07195 334 aaKnown RBP8.29□□□□□ -1.08
CPSF6-206ENST00000550987 PCSK2P16519 638 aa8.29□□□□□ -1.08
CPSF6-206ENST00000550987 PTGIRP43119 386 aa8.29□□□□□ -1.08
CPSF6-206ENST00000550987 RELBQ01201 579 aa8.29□□□□□ -1.08
CPSF6-206ENST00000550987 ATP2B2Q01814 1243 aa8.29□□□□□ -1.08
CPSF6-206ENST00000550987 DNM1Q05193 864 aaKnown RBP8.29□□□□□ -1.08
CPSF6-206ENST00000550987 ALDH16A1Q8IZ83 802 aa8.29□□□□□ -1.08
CPSF6-206ENST00000550987 MYO19Q96H55 970 aa8.29□□□□□ -1.08
CPSF6-206ENST00000550987 NIFKQ9BYG3 293 aaKnown RBP8.29□□□□□ -1.08
CPSF6-206ENST00000550987 LRFN2Q9ULH4 789 aa8.29□□□□□ -1.08
CPSF6-206ENST00000550987 USP3Q9Y6I4 520 aa8.29□□□□□ -1.08
CPSF6-206ENST00000550987 ZBTB39O15060 712 aa8.28□□□□□ -1.08
CPSF6-206ENST00000550987 ZIC2O95409 532 aaPredicted RBP8.28□□□□□ -1.08
CPSF6-206ENST00000550987 USP5P45974 858 aa8.28□□□□□ -1.08
CPSF6-206ENST00000550987 EHHADHQ08426 723 aa8.28□□□□□ -1.08
CPSF6-206ENST00000550987 DGKZQ13574 1117 aa8.28□□□□□ -1.08
CPSF6-206ENST00000550987 ZNF697Q5TEC3 545 aa8.28□□□□□ -1.08
CPSF6-206ENST00000550987 SPRYD7Q5W111 196 aa8.28□□□□□ -1.08
CPSF6-206ENST00000550987 ATCAYQ86WG3 371 aa8.28□□□□□ -1.08
CPSF6-206ENST00000550987 IFT43Q96FT9 208 aa8.28□□□□□ -1.08
CPSF6-206ENST00000550987 AGBL1Q96MI9 1066 aa8.28□□□□□ -1.08
CPSF6-206ENST00000550987 ZNF395Q9H8N7 513 aaPredicted RBP8.28□□□□□ -1.08
CPSF6-206ENST00000550987 IQSEC3Q9UPP2 1182 aaPredicted RBP8.28□□□□□ -1.08
CPSF6-206ENST00000550987 CFAP43Q8NDM7 1665 aa8.27□□□□□ -1.08
CPSF6-206ENST00000550987 CEP170Q5SW79 1584 aa8.27□□□□□ -1.09
CPSF6-206ENST00000550987 TTC24A2A3L6 582 aaPredicted RBP8.27□□□□□ -1.09
CPSF6-206ENST00000550987 EML1O00423 815 aa8.27□□□□□ -1.09
CPSF6-206ENST00000550987 RTN1Q16799 776 aa8.27□□□□□ -1.09
CPSF6-206ENST00000550987 POTEAQ6S8J7 498 aa8.27□□□□□ -1.09
CPSF6-206ENST00000550987 SNIP1Q8TAD8 396 aaKnown RBP8.27□□□□□ -1.09
CPSF6-206ENST00000550987 NIF3L1Q9GZT8 377 aa8.27□□□□□ -1.09
CPSF6-206ENST00000550987 POLIQ9UNA4 740 aa8.27□□□□□ -1.09
CPSF6-206ENST00000550987 TARBP1Q13395 1621 aaKnown RBP8.26□□□□□ -1.09
CPSF6-206ENST00000550987 LOC105371045A0A1W2PR82 267 aa8.26□□□□□ -1.09
CPSF6-206ENST00000550987 WDR4P57081 412 aaKnown RBP8.26□□□□□ -1.09
CPSF6-206ENST00000550987 GNASQ5JWF2 1037 aa8.26□□□□□ -1.09
CPSF6-206ENST00000550987 SLC27A3Q5K4L6 730 aa8.26□□□□□ -1.09
CPSF6-206ENST00000550987 SH3PXD2AQ5TCZ1 1133 aa8.26□□□□□ -1.09
CPSF6-206ENST00000550987 PPARGC1BQ86YN6 1023 aaKnown RBP8.26□□□□□ -1.09
CPSF6-206ENST00000550987 EMID1Q96A84 441 aaPredicted RBP8.26□□□□□ -1.09
CPSF6-206ENST00000550987 ITPKCQ96DU7 683 aa8.26□□□□□ -1.09
CPSF6-206ENST00000550987 PHACTR1Q9C0D0 580 aa8.26□□□□□ -1.09
CPSF6-206ENST00000550987 KLK14Q9P0G3 267 aa8.26□□□□□ -1.09
CPSF6-206ENST00000550987 YEATS2Q9ULM3 1422 aa8.26□□□□□ -1.09
CPSF6-206ENST00000550987 SETBP1Q9Y6X0 1596 aa8.26□□□□□ -1.09
CPSF6-206ENST00000550987 PRPF40AO75400 957 aaKnown RBP8.25□□□□□ -1.09
CPSF6-206ENST00000550987 MZF1P28698 734 aaPredicted RBP8.25□□□□□ -1.09
CPSF6-206ENST00000550987 ZAP70P43403 619 aa8.25□□□□□ -1.09
CPSF6-206ENST00000550987 FMR1Q06787 632 aaKnown RBP eCLIP8.25□□□□□ -1.09
CPSF6-206ENST00000550987 Q6ZVU0 165 aa8.25□□□□□ -1.09
CPSF6-206ENST00000550987 ZNF598Q86UK7 904 aaKnown RBP8.25□□□□□ -1.09
CPSF6-206ENST00000550987 EDEM1Q92611 657 aa8.25□□□□□ -1.09
CPSF6-206ENST00000550987 AIDAQ96BJ3 306 aa8.25□□□□□ -1.09
CPSF6-206ENST00000550987 BACH2Q9BYV9 841 aa8.25□□□□□ -1.09
CPSF6-206ENST00000550987 PARP2Q9UGN5 583 aa8.25□□□□□ -1.09
CPSF6-206ENST00000550987 HRH3Q9Y5N1 445 aa8.25□□□□□ -1.09
CPSF6-206ENST00000550987 RIMS1Q86UR5 1692 aaKnown RBP8.24□□□□□ -1.09
CPSF6-206ENST00000550987 HIRAP54198 1017 aaPredicted RBP8.24□□□□□ -1.09
CPSF6-206ENST00000550987 PSMD2Q13200 908 aa8.24□□□□□ -1.09
CPSF6-206ENST00000550987 DSC3Q14574 896 aa8.24□□□□□ -1.09
CPSF6-206ENST00000550987 CYP4X1Q8N118 509 aa8.24□□□□□ -1.09
CPSF6-206ENST00000550987 KDF1Q8NAX2 398 aaPredicted RBP8.24□□□□□ -1.09
CPSF6-206ENST00000550987 ZDHHC1Q8WTX9 485 aa8.24□□□□□ -1.09
CPSF6-206ENST00000550987 DUSP9Q99956 384 aaKnown RBP8.24□□□□□ -1.09
CPSF6-206ENST00000550987 FHDC1Q9C0D6 1143 aaPredicted RBP8.24□□□□□ -1.09
CPSF6-206ENST00000550987 ZFAND3Q9H8U3 227 aa8.24□□□□□ -1.09
CPSF6-206ENST00000550987 FAM13BQ9NYF5 915 aa8.24□□□□□ -1.09
CPSF6-206ENST00000550987 NEFLP07196 543 aa8.23□□□□□ -1.09
CPSF6-206ENST00000550987 C8orf34Q49A92 452 aa8.23□□□□□ -1.09
CPSF6-206ENST00000550987 ETFBKMTQ8IXQ9 262 aa8.23□□□□□ -1.09
CPSF6-206ENST00000550987 TMEM87AQ8NBN3 555 aa8.23□□□□□ -1.09
CPSF6-206ENST00000550987 RHBDD1Q8TEB9 315 aa8.23□□□□□ -1.09
CPSF6-206ENST00000550987 FAM129BQ96TA1 746 aa8.23□□□□□ -1.09
CPSF6-206ENST00000550987 PEG3Q9GZU2 1588 aa8.22□□□□□ -1.09
CPSF6-206ENST00000550987 ADCY10Q96PN6 1610 aa8.22□□□□□ -1.09
CPSF6-206ENST00000550987 SCAMP3O14828 347 aaKnown RBP8.22□□□□□ -1.09
CPSF6-206ENST00000550987 SORBS3O60504 671 aa8.22□□□□□ -1.09
CPSF6-206ENST00000550987 RECKO95980 971 aa8.22□□□□□ -1.09
CPSF6-206ENST00000550987 C1orf53Q5VUE5 145 aa8.22□□□□□ -1.09
CPSF6-206ENST00000550987 TREML1Q86YW5 311 aa8.22□□□□□ -1.09
CPSF6-206ENST00000550987 GPR152Q8TDT2 470 aa8.22□□□□□ -1.09
CPSF6-206ENST00000550987 FAM161BQ96MY7 647 aa8.22□□□□□ -1.09
CPSF6-206ENST00000550987 NEUROD4Q9HD90 331 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms