RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 ATCAYQ86WG3 371 aa9.26□□□□□ -0.93
TGFBR1-208ENST00000550253 XAGE2Q96GT9 111 aa9.26□□□□□ -0.93
TGFBR1-208ENST00000550253 IQSEC3Q9UPP2 1182 aaPredicted RBP9.26□□□□□ -0.93
TGFBR1-208ENST00000550253 USP3Q9Y6I4 520 aa9.26□□□□□ -0.93
TGFBR1-208ENST00000550253 MYT1Q01538 1121 aa9.25□□□□□ -0.93
TGFBR1-208ENST00000550253 PSMD2Q13200 908 aa9.25□□□□□ -0.93
TGFBR1-208ENST00000550253 GJD3Q8N144 294 aa9.25□□□□□ -0.93
TGFBR1-208ENST00000550253 MPNDQ8N594 471 aa9.25□□□□□ -0.93
TGFBR1-208ENST00000550253 EHBP1Q8NDI1 1231 aa9.25□□□□□ -0.93
TGFBR1-208ENST00000550253 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
TGFBR1-208ENST00000550253 KRTAP3-2Q9BYR7 98 aa9.25□□□□□ -0.93
TGFBR1-208ENST00000550253 NIF3L1Q9GZT8 377 aa9.25□□□□□ -0.93
TGFBR1-208ENST00000550253 RNF223E7ERA6 249 aa9.24□□□□□ -0.93
TGFBR1-208ENST00000550253 CDK2AP1O14519 115 aa9.24□□□□□ -0.93
TGFBR1-208ENST00000550253 BRD2P25440 801 aaKnown RBP9.24□□□□□ -0.93
TGFBR1-208ENST00000550253 ATP2B2Q01814 1243 aa9.24□□□□□ -0.93
TGFBR1-208ENST00000550253 PPP1R26Q5T8A7 1209 aaPredicted RBP9.24□□□□□ -0.93
TGFBR1-208ENST00000550253 RNF34Q969K3 372 aa9.24□□□□□ -0.93
TGFBR1-208ENST00000550253 SPATA32Q96LK8 384 aa9.24□□□□□ -0.93
TGFBR1-208ENST00000550253 TINF2Q9BSI4 451 aa9.24□□□□□ -0.93
TGFBR1-208ENST00000550253 RAB6BQ9NRW1 208 aa9.24□□□□□ -0.93
TGFBR1-208ENST00000550253 VTI1BQ9UEU0 232 aa9.24□□□□□ -0.93
TGFBR1-208ENST00000550253 POLIQ9UNA4 740 aa9.24□□□□□ -0.93
TGFBR1-208ENST00000550253 WRNQ14191 1432 aaPredicted RBP eCLIP9.24□□□□□ -0.93
TGFBR1-208ENST00000550253 FHAD1B1AJZ9 1412 aa9.23□□□□□ -0.93
TGFBR1-208ENST00000550253 SMARCA5O60264 1052 aaPredicted RBP9.23□□□□□ -0.93
TGFBR1-208ENST00000550253 IL2RAP01589 272 aa9.23□□□□□ -0.93
TGFBR1-208ENST00000550253 CCDC116Q8IYX3 515 aa9.23□□□□□ -0.93
TGFBR1-208ENST00000550253 TGIF2Q9GZN2 237 aa9.23□□□□□ -0.93
TGFBR1-208ENST00000550253 HRH3Q9Y5N1 445 aa9.23□□□□□ -0.93
TGFBR1-208ENST00000550253 ERICH3Q5RHP9 1530 aa9.23□□□□□ -0.93
TGFBR1-208ENST00000550253 RUSC2Q8N2Y8 1516 aa9.23□□□□□ -0.93
TGFBR1-208ENST00000550253 MZF1P28698 734 aaPredicted RBP9.22□□□□□ -0.93
TGFBR1-208ENST00000550253 ALG1LQ6GMV1 187 aa9.22□□□□□ -0.93
TGFBR1-208ENST00000550253 ANKLE1Q8NAG6 615 aa9.22□□□□□ -0.93
TGFBR1-208ENST00000550253 ARHGEF10LQ9HCE6 1279 aa9.22□□□□□ -0.93
TGFBR1-208ENST00000550253 PNMA6FA0A0J9YX94 578 aa9.21□□□□□ -0.93
TGFBR1-208ENST00000550253 EML1O00423 815 aa9.21□□□□□ -0.93
TGFBR1-208ENST00000550253 CANXP27824 592 aaKnown RBP9.21□□□□□ -0.93
TGFBR1-208ENST00000550253 HIRAP54198 1017 aaPredicted RBP9.21□□□□□ -0.93
TGFBR1-208ENST00000550253 RC3H1Q5TC82 1133 aaKnown RBP9.21□□□□□ -0.93
TGFBR1-208ENST00000550253 ETFBKMTQ8IXQ9 262 aa9.21□□□□□ -0.93
TGFBR1-208ENST00000550253 SLC43A3Q8NBI5 491 aa9.21□□□□□ -0.93
TGFBR1-208ENST00000550253 CFHR5Q9BXR6 569 aa9.21□□□□□ -0.93
TGFBR1-208ENST00000550253 TLL2Q9Y6L7 1015 aa9.21□□□□□ -0.93
TGFBR1-208ENST00000550253 PRG4Q92954 1404 aaPredicted RBP9.21□□□□□ -0.94
TGFBR1-208ENST00000550253 SIAH2O43255 324 aa9.21□□□□□ -0.94
TGFBR1-208ENST00000550253 USP5P45974 858 aa9.21□□□□□ -0.94
TGFBR1-208ENST00000550253 SH3PXD2AQ5TCZ1 1133 aa9.21□□□□□ -0.94
TGFBR1-208ENST00000550253 CHMP3Q9Y3E7 222 aa9.21□□□□□ -0.94
TGFBR1-208ENST00000550253 ADCY10Q96PN6 1610 aa9.2□□□□□ -0.94
TGFBR1-208ENST00000550253 DIP2BQ9P265 1576 aa9.2□□□□□ -0.94
TGFBR1-208ENST00000550253 ADH1CP00326 375 aa9.2□□□□□ -0.94
TGFBR1-208ENST00000550253 GNA15P30679 374 aa9.2□□□□□ -0.94
TGFBR1-208ENST00000550253 ZNF76P36508 570 aa9.2□□□□□ -0.94
TGFBR1-208ENST00000550253 RPIAP49247 311 aa9.2□□□□□ -0.94
TGFBR1-208ENST00000550253 TEAD4Q15561 434 aa9.2□□□□□ -0.94
TGFBR1-208ENST00000550253 C11orf91Q3C1V1 193 aa9.2□□□□□ -0.94
TGFBR1-208ENST00000550253 ZNF295-AS1Q8N0V1 137 aa9.2□□□□□ -0.94
TGFBR1-208ENST00000550253 ZDHHC1Q8WTX9 485 aa9.2□□□□□ -0.94
TGFBR1-208ENST00000550253 NGLY1Q96IV0 654 aa9.2□□□□□ -0.94
TGFBR1-208ENST00000550253 EMILIN1Q9Y6C2 1016 aa9.2□□□□□ -0.94
TGFBR1-208ENST00000550253 SERTM1A2A2V5 107 aa9.19□□□□□ -0.94
TGFBR1-208ENST00000550253 PDGFAP04085 211 aa9.19□□□□□ -0.94
TGFBR1-208ENST00000550253 DNM1Q05193 864 aaKnown RBP9.19□□□□□ -0.94
TGFBR1-208ENST00000550253 NR5A1Q13285 461 aa9.19□□□□□ -0.94
TGFBR1-208ENST00000550253 TLR1Q15399 786 aa9.19□□□□□ -0.94
TGFBR1-208ENST00000550253 ALDH16A1Q8IZ83 802 aa9.19□□□□□ -0.94
TGFBR1-208ENST00000550253 EDEM1Q92611 657 aa9.19□□□□□ -0.94
TGFBR1-208ENST00000550253 CNKSR1Q969H4 720 aa9.19□□□□□ -0.94
TGFBR1-208ENST00000550253 ESYT1Q9BSJ8 1104 aa9.19□□□□□ -0.94
TGFBR1-208ENST00000550253 TANGO6Q9C0B7 1094 aa9.19□□□□□ -0.94
TGFBR1-208ENST00000550253 CDK11BP21127 795 aaKnown RBP9.18□□□□□ -0.94
TGFBR1-208ENST00000550253 NOS2P35228 1153 aa9.18□□□□□ -0.94
TGFBR1-208ENST00000550253 CDK11AQ9UQ88 783 aaPredicted RBP9.18□□□□□ -0.94
TGFBR1-208ENST00000550253 NR3C2P08235 984 aa9.17□□□□□ -0.94
TGFBR1-208ENST00000550253 ZAP70P43403 619 aa9.17□□□□□ -0.94
TGFBR1-208ENST00000550253 DGKZQ13574 1117 aa9.17□□□□□ -0.94
TGFBR1-208ENST00000550253 RTN1Q16799 776 aa9.17□□□□□ -0.94
TGFBR1-208ENST00000550253 DPH6Q7L8W6 267 aa9.17□□□□□ -0.94
TGFBR1-208ENST00000550253 KDF1Q8NAX2 398 aaPredicted RBP9.17□□□□□ -0.94
TGFBR1-208ENST00000550253 FBF1Q8TES7 1133 aa9.17□□□□□ -0.94
TGFBR1-208ENST00000550253 CSRNP1Q96S65 589 aa9.17□□□□□ -0.94
TGFBR1-208ENST00000550253 ACBD3Q9H3P7 528 aa9.17□□□□□ -0.94
TGFBR1-208ENST00000550253 CCSER2Q9H7U1 834 aa9.17□□□□□ -0.94
TGFBR1-208ENST00000550253 HCN4Q9Y3Q4 1203 aa9.17□□□□□ -0.94
TGFBR1-208ENST00000550253 ABCC10Q5T3U5 1492 aa9.17□□□□□ -0.94
TGFBR1-208ENST00000550253 MAPKBP1O60336 1514 aa9.17□□□□□ -0.94
TGFBR1-208ENST00000550253 CTSHP09668 335 aa9.16□□□□□ -0.94
TGFBR1-208ENST00000550253 NBPF15Q8N660 670 aa9.16□□□□□ -0.94
TGFBR1-208ENST00000550253 FHDC1Q9C0D6 1143 aaPredicted RBP9.16□□□□□ -0.94
TGFBR1-208ENST00000550253 CAPN10Q9HC96 672 aa9.16□□□□□ -0.94
TGFBR1-208ENST00000550253 PRKAG2Q9UGJ0 569 aa9.16□□□□□ -0.94
TGFBR1-208ENST00000550253 AK5Q9Y6K8 562 aa9.16□□□□□ -0.94
TGFBR1-208ENST00000550253 TSPOAP1O95153 1857 aa9.16□□□□□ -0.94
TGFBR1-208ENST00000550253 L3MBTL2Q969R5 705 aa9.15□□□□□ -0.94
TGFBR1-208ENST00000550253 IFT43Q96FT9 208 aa9.15□□□□□ -0.94
TGFBR1-208ENST00000550253 NLRP2Q9NX02 1062 aa9.15□□□□□ -0.94
TGFBR1-208ENST00000550253 PGPEP1Q9NXJ5 209 aa9.15□□□□□ -0.94
TGFBR1-208ENST00000550253 KLK14Q9P0G3 267 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms