RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 BACH1O14867 736 aa4.99□□□□□ -1.61
CD44-234ENST00000531873 BCRP11274 1271 aa4.99□□□□□ -1.61
CD44-234ENST00000531873 NPR3P17342 541 aa4.99□□□□□ -1.61
CD44-234ENST00000531873 CTSOP43234 321 aaPredicted RBP4.99□□□□□ -1.61
CD44-234ENST00000531873 NAA30Q147X3 362 aaPredicted RBP4.99□□□□□ -1.61
CD44-234ENST00000531873 CYP2U1Q7Z449 544 aa4.99□□□□□ -1.61
CD44-234ENST00000531873 FBXO33Q7Z6M2 555 aa4.99□□□□□ -1.61
CD44-234ENST00000531873 RNF217Q8TC41 542 aa4.99□□□□□ -1.61
CD44-234ENST00000531873 GIPC2Q8TF65 315 aa4.99□□□□□ -1.61
CD44-234ENST00000531873 ASB16Q96NS5 453 aa4.99□□□□□ -1.61
CD44-234ENST00000531873 BCL2L13Q9BXK5 485 aa4.99□□□□□ -1.61
CD44-234ENST00000531873 SAP130Q9H0E3 1048 aa4.99□□□□□ -1.61
CD44-234ENST00000531873 RAB6BQ9NRW1 208 aa4.99□□□□□ -1.61
CD44-234ENST00000531873 DCTN4Q9UJW0 460 aa4.99□□□□□ -1.61
CD44-234ENST00000531873 USP3Q9Y6I4 520 aa4.99□□□□□ -1.61
CD44-234ENST00000531873 ATAD2Q6PL18 1390 aa4.99□□□□□ -1.61
CD44-234ENST00000531873 GNRH1P01148 92 aa4.98□□□□□ -1.61
CD44-234ENST00000531873 IL2RAP01589 272 aa4.98□□□□□ -1.61
CD44-234ENST00000531873 MAPK1P28482 360 aa4.98□□□□□ -1.61
CD44-234ENST00000531873 TBCELQ5QJ74 424 aa4.98□□□□□ -1.61
CD44-234ENST00000531873 POTEAQ6S8J7 498 aa4.98□□□□□ -1.61
CD44-234ENST00000531873 SLC9A9Q8IVB4 645 aa4.98□□□□□ -1.61
CD44-234ENST00000531873 KDF1Q8NAX2 398 aaPredicted RBP4.98□□□□□ -1.61
CD44-234ENST00000531873 MRRFQ96E11 262 aaKnown RBP4.98□□□□□ -1.61
CD44-234ENST00000531873 GMCL1Q96IK5 515 aa4.98□□□□□ -1.61
CD44-234ENST00000531873 C2orf49Q9BVC5 232 aaPredicted RBP4.98□□□□□ -1.61
CD44-234ENST00000531873 ARHGEF10LQ9HCE6 1279 aa4.98□□□□□ -1.61
CD44-234ENST00000531873 MBIPQ9NS73 344 aa4.98□□□□□ -1.61
CD44-234ENST00000531873 SCHIP1Q9P0W5 487 aaPredicted RBP4.98□□□□□ -1.61
CD44-234ENST00000531873 IQSEC3Q9UPP2 1182 aaPredicted RBP4.98□□□□□ -1.61
CD44-234ENST00000531873 HRH3Q9Y5N1 445 aa4.98□□□□□ -1.61
CD44-234ENST00000531873 TNFRSF10BO14763 440 aa4.97□□□□□ -1.61
CD44-234ENST00000531873 MPSTP25325 297 aa4.97□□□□□ -1.61
CD44-234ENST00000531873 TAGLNQ01995 201 aaKnown RBP4.97□□□□□ -1.61
CD44-234ENST00000531873 ALYREFQ86V81 257 aaKnown RBP4.97□□□□□ -1.61
CD44-234ENST00000531873 ZNF295-AS1Q8N0V1 137 aa4.97□□□□□ -1.61
CD44-234ENST00000531873 STAG2Q8N3U4 1231 aa4.97□□□□□ -1.61
CD44-234ENST00000531873 INSM2Q96T92 566 aaPredicted RBP4.97□□□□□ -1.61
CD44-234ENST00000531873 QTRT2Q9H974 415 aaKnown RBP4.97□□□□□ -1.61
CD44-234ENST00000531873 CUEDC1Q9NWM3 386 aaPredicted RBP4.97□□□□□ -1.61
CD44-234ENST00000531873 IGF1RP08069 1367 aa4.96□□□□□ -1.62
CD44-234ENST00000531873 KRBA1A5PL33 1030 aa4.96□□□□□ -1.62
CD44-234ENST00000531873 A6NJY4 79 aa4.96□□□□□ -1.62
CD44-234ENST00000531873 PPP1R12BO60237 982 aaPredicted RBP4.96□□□□□ -1.62
CD44-234ENST00000531873 ADH1AP07327 375 aa4.96□□□□□ -1.62
CD44-234ENST00000531873 SMTNP53814 917 aa4.96□□□□□ -1.62
CD44-234ENST00000531873 FAM26DQ5JW98 314 aa4.96□□□□□ -1.62
CD44-234ENST00000531873 C16orf46Q6P387 395 aa4.96□□□□□ -1.62
CD44-234ENST00000531873 RGL4Q8IZJ4 473 aa4.96□□□□□ -1.62
CD44-234ENST00000531873 NEDD1Q8NHV4 660 aa4.96□□□□□ -1.62
CD44-234ENST00000531873 CHMP7Q8WUX9 453 aaPredicted RBP4.96□□□□□ -1.62
CD44-234ENST00000531873 XAGE2Q96GT9 111 aa4.96□□□□□ -1.62
CD44-234ENST00000531873 ESF1Q9H501 851 aaKnown RBP4.96□□□□□ -1.62
CD44-234ENST00000531873 IGSF3O75054 1194 aa4.95□□□□□ -1.62
CD44-234ENST00000531873 IGHA2P01877 340 aa4.95□□□□□ -1.62
CD44-234ENST00000531873 FURINP09958 794 aa4.95□□□□□ -1.62
CD44-234ENST00000531873 PSMA6P60900 246 aaKnown RBP4.95□□□□□ -1.62
CD44-234ENST00000531873 ESCO1Q5FWF5 840 aa4.95□□□□□ -1.62
CD44-234ENST00000531873 COX20Q5RI15 118 aa4.95□□□□□ -1.62
CD44-234ENST00000531873 SH3PXD2AQ5TCZ1 1133 aa4.95□□□□□ -1.62
CD44-234ENST00000531873 KRTAP4-12Q9BQ66 201 aa4.95□□□□□ -1.62
CD44-234ENST00000531873 FHDC1Q9C0D6 1143 aaPredicted RBP4.95□□□□□ -1.62
CD44-234ENST00000531873 LRFN2Q9ULH4 789 aa4.95□□□□□ -1.62
CD44-234ENST00000531873 FZD6O60353 706 aa4.94□□□□□ -1.62
CD44-234ENST00000531873 FAM13AO94988 1023 aa4.94□□□□□ -1.62
CD44-234ENST00000531873 TLR1Q15399 786 aa4.94□□□□□ -1.62
CD44-234ENST00000531873 LCE3BQ5TA77 95 aa4.94□□□□□ -1.62
CD44-234ENST00000531873 TMC7Q7Z402 723 aa4.94□□□□□ -1.62
CD44-234ENST00000531873 TRIM22Q8IYM9 498 aa4.94□□□□□ -1.62
CD44-234ENST00000531873 ZDHHC1Q8WTX9 485 aa4.94□□□□□ -1.62
CD44-234ENST00000531873 CNKSR1Q969H4 720 aa4.94□□□□□ -1.62
CD44-234ENST00000531873 TRIM52Q96A61 297 aa4.94□□□□□ -1.62
CD44-234ENST00000531873 ACDQ96AP0 544 aa4.94□□□□□ -1.62
CD44-234ENST00000531873 MYO19Q96H55 970 aa4.94□□□□□ -1.62
CD44-234ENST00000531873 AGBL1Q96MI9 1066 aa4.94□□□□□ -1.62
CD44-234ENST00000531873 ESYT1Q9BSJ8 1104 aa4.94□□□□□ -1.62
CD44-234ENST00000531873 RBCK1Q9BYM8 510 aa4.94□□□□□ -1.62
CD44-234ENST00000531873 POLMQ9NP87 494 aaPredicted RBP4.94□□□□□ -1.62
CD44-234ENST00000531873 EML1O00423 815 aa4.93□□□□□ -1.62
CD44-234ENST00000531873 CDK2AP1O14519 115 aa4.93□□□□□ -1.62
CD44-234ENST00000531873 P4HBP07237 508 aaKnown RBP4.93□□□□□ -1.62
CD44-234ENST00000531873 VAMP1P23763 118 aa4.93□□□□□ -1.62
CD44-234ENST00000531873 EIF1AXP47813 144 aaKnown RBP4.93□□□□□ -1.62
CD44-234ENST00000531873 HIRAP54198 1017 aaPredicted RBP4.93□□□□□ -1.62
CD44-234ENST00000531873 RELBQ01201 579 aa4.93□□□□□ -1.62
CD44-234ENST00000531873 FMR1Q06787 632 aaKnown RBP eCLIP4.93□□□□□ -1.62
CD44-234ENST00000531873 CLN3Q13286 438 aa4.93□□□□□ -1.62
CD44-234ENST00000531873 COL19A1Q14993 1142 aa4.93□□□□□ -1.62
CD44-234ENST00000531873 ZSCAN29Q8IWY8 852 aaPredicted RBP4.93□□□□□ -1.62
CD44-234ENST00000531873 VTI1AQ96AJ9 217 aa4.93□□□□□ -1.62
CD44-234ENST00000531873 ZNF837Q96EG3 531 aaPredicted RBP4.93□□□□□ -1.62
CD44-234ENST00000531873 ZBTB39O15060 712 aa4.92□□□□□ -1.62
CD44-234ENST00000531873 GPR182O15218 404 aa4.92□□□□□ -1.62
CD44-234ENST00000531873 TREHO43280 583 aa4.92□□□□□ -1.62
CD44-234ENST00000531873 OIP5O43482 229 aa4.92□□□□□ -1.62
CD44-234ENST00000531873 RECKO95980 971 aa4.92□□□□□ -1.62
CD44-234ENST00000531873 FOXR1Q6PIV2 292 aa4.92□□□□□ -1.62
CD44-234ENST00000531873 FAM129BQ96TA1 746 aa4.92□□□□□ -1.62
CD44-234ENST00000531873 CCDC87Q9NVE4 849 aa4.92□□□□□ -1.62
CD44-234ENST00000531873 STIM2Q9P246 746 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms