RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 TXNRD1Q16881 649 aa7.84□□□□□ -1.15
PABPC1-223ENST00000523636 RTL5Q5HYW3 569 aaPredicted RBP7.84□□□□□ -1.15
PABPC1-223ENST00000523636 ABHD8Q96I13 439 aa7.84□□□□□ -1.15
PABPC1-223ENST00000523636 NMRK2Q9NPI5 230 aa7.84□□□□□ -1.15
PABPC1-223ENST00000523636 PCDHB3Q9Y5E6 796 aa7.84□□□□□ -1.15
PABPC1-223ENST00000523636 LRRC37A3O60309 1634 aa7.84□□□□□ -1.15
PABPC1-223ENST00000523636 HFM1A2PYH4 1435 aa7.84□□□□□ -1.15
PABPC1-223ENST00000523636 MKI67P46013 3256 aaKnown RBP7.83□□□□□ -1.16
PABPC1-223ENST00000523636 USP19O94966 1318 aa7.83□□□□□ -1.16
PABPC1-223ENST00000523636 FOXN1O15353 648 aa7.83□□□□□ -1.16
PABPC1-223ENST00000523636 NR1I2O75469 434 aa7.83□□□□□ -1.16
PABPC1-223ENST00000523636 ZNF827Q17R98 1081 aa7.83□□□□□ -1.16
PABPC1-223ENST00000523636 PUS10Q3MIT2 529 aaKnown RBP7.83□□□□□ -1.16
PABPC1-223ENST00000523636 SLC27A5Q9Y2P5 690 aa7.83□□□□□ -1.16
PABPC1-223ENST00000523636 CICQ96RK0 1608 aaPredicted RBP7.82□□□□□ -1.16
PABPC1-223ENST00000523636 OVOS2A0A0G2JMS6 1433 aa7.82□□□□□ -1.16
PABPC1-223ENST00000523636 OVOS2A0A0J9YW53 1432 aa7.82□□□□□ -1.16
PABPC1-223ENST00000523636 C6orf229H3BNL8 230 aa7.82□□□□□ -1.16
PABPC1-223ENST00000523636 OVOS2Q6IE36 1432 aa7.82□□□□□ -1.16
PABPC1-223ENST00000523636 RETREG3Q86VR2 466 aa7.82□□□□□ -1.16
PABPC1-223ENST00000523636 ZMYND15Q9H091 742 aa7.82□□□□□ -1.16
PABPC1-223ENST00000523636 NRXN1Q9ULB1 1477 aa7.81□□□□□ -1.16
PABPC1-223ENST00000523636 APBB1O00213 710 aa7.81□□□□□ -1.16
PABPC1-223ENST00000523636 DESI1Q6ICB0 168 aa7.81□□□□□ -1.16
PABPC1-223ENST00000523636 SCUBE3Q8IX30 993 aa7.81□□□□□ -1.16
PABPC1-223ENST00000523636 HELBQ8NG08 1087 aaPredicted RBP7.81□□□□□ -1.16
PABPC1-223ENST00000523636 USP35Q9P2H5 1018 aa7.81□□□□□ -1.16
PABPC1-223ENST00000523636 ARHGEF10O15013 1369 aa7.81□□□□□ -1.16
PABPC1-223ENST00000523636 DHX57Q6P158 1386 aaKnown RBP7.81□□□□□ -1.16
PABPC1-223ENST00000523636 SSH2Q76I76 1423 aa7.8□□□□□ -1.16
PABPC1-223ENST00000523636 LOC105371045A0A1W2PR82 267 aa7.8□□□□□ -1.16
PABPC1-223ENST00000523636 AP1G2O75843 785 aa7.8□□□□□ -1.16
PABPC1-223ENST00000523636 BRICD5Q6PL45 260 aa7.8□□□□□ -1.16
PABPC1-223ENST00000523636 PRDM10Q9NQV6 1147 aa7.8□□□□□ -1.16
PABPC1-223ENST00000523636 LMO7Q8WWI1 1683 aa7.79□□□□□ -1.16
PABPC1-223ENST00000523636 IFT172Q9UG01 1749 aa7.79□□□□□ -1.16
PABPC1-223ENST00000523636 A6NJR5 290 aa7.79□□□□□ -1.16
PABPC1-223ENST00000523636 CFAP99D6REC4 459 aa7.79□□□□□ -1.16
PABPC1-223ENST00000523636 FMNL1O95466 1100 aaPredicted RBP7.79□□□□□ -1.16
PABPC1-223ENST00000523636 CHRNA2Q15822 529 aa7.79□□□□□ -1.16
PABPC1-223ENST00000523636 BLOC1S3Q6QNY0 202 aa7.79□□□□□ -1.16
PABPC1-223ENST00000523636 THAP11Q96EK4 314 aa7.79□□□□□ -1.16
PABPC1-223ENST00000523636 STRN4Q9NRL3 753 aa7.79□□□□□ -1.16
PABPC1-223ENST00000523636 USP17L8P0C7I0 530 aa7.78□□□□□ -1.16
PABPC1-223ENST00000523636 FSTL1Q12841 308 aa7.78□□□□□ -1.16
PABPC1-223ENST00000523636 PRR7Q8TB68 274 aa7.78□□□□□ -1.16
PABPC1-223ENST00000523636 SYMPKQ92797 1274 aaKnown RBP7.78□□□□□ -1.16
PABPC1-223ENST00000523636 USB1Q9BQ65 265 aaKnown RBP7.78□□□□□ -1.16
PABPC1-223ENST00000523636 SNRKQ9NRH2 765 aa7.78□□□□□ -1.16
PABPC1-223ENST00000523636 PLEKHH1Q9ULM0 1364 aa7.78□□□□□ -1.16
PABPC1-223ENST00000523636 AKAP12Q02952 1782 aa7.78□□□□□ -1.16
PABPC1-223ENST00000523636 WNK3Q9BYP7 1800 aa7.78□□□□□ -1.16
PABPC1-223ENST00000523636 KIAA0232Q92628 1395 aa7.77□□□□□ -1.17
PABPC1-223ENST00000523636 LARP1Q6PKG0 1096 aaKnown RBP7.77□□□□□ -1.17
PABPC1-223ENST00000523636 RNF19BQ6ZMZ0 732 aa7.77□□□□□ -1.17
PABPC1-223ENST00000523636 MTMR14Q8NCE2 650 aa7.77□□□□□ -1.17
PABPC1-223ENST00000523636 BCL9O00512 1426 aa7.77□□□□□ -1.17
PABPC1-223ENST00000523636 MYOM3Q5VTT5 1437 aa7.77□□□□□ -1.17
PABPC1-223ENST00000523636 PNPLA7Q6ZV29 1317 aa7.77□□□□□ -1.17
PABPC1-223ENST00000523636 PTPN5P54829 565 aa7.76□□□□□ -1.17
PABPC1-223ENST00000523636 WAPLQ7Z5K2 1190 aa7.76□□□□□ -1.17
PABPC1-223ENST00000523636 PRM3Q9NNZ6 103 aa7.76□□□□□ -1.17
PABPC1-223ENST00000523636 LRRC4BQ9NT99 713 aa7.76□□□□□ -1.17
PABPC1-223ENST00000523636 VCANP13611 3396 aa7.76□□□□□ -1.17
PABPC1-223ENST00000523636 CLTCL1P53675 1640 aa7.75□□□□□ -1.17
PABPC1-223ENST00000523636 UNC80Q8N2C7 3258 aa7.75□□□□□ -1.17
PABPC1-223ENST00000523636 RAD21O60216 631 aa7.75□□□□□ -1.17
PABPC1-223ENST00000523636 CTDSPL2Q05D32 466 aa7.75□□□□□ -1.17
PABPC1-223ENST00000523636 MSS51Q4VC12 460 aa7.75□□□□□ -1.17
PABPC1-223ENST00000523636 TCP11L2Q8N4U5 519 aa7.75□□□□□ -1.17
PABPC1-223ENST00000523636 MTRQ99707 1265 aa7.75□□□□□ -1.17
PABPC1-223ENST00000523636 PRDM11Q9NQV5 511 aa7.75□□□□□ -1.17
PABPC1-223ENST00000523636 QRICH2Q9H0J4 1663 aa7.75□□□□□ -1.17
PABPC1-223ENST00000523636 NHSQ6T4R5 1651 aa7.74□□□□□ -1.17
PABPC1-223ENST00000523636 VIRMAQ69YN4 1812 aaKnown RBP7.74□□□□□ -1.17
PABPC1-223ENST00000523636 ZPR1O75312 459 aa7.74□□□□□ -1.17
PABPC1-223ENST00000523636 POLD1P28340 1107 aa7.74□□□□□ -1.17
PABPC1-223ENST00000523636 COPS2P61201 443 aa7.74□□□□□ -1.17
PABPC1-223ENST00000523636 PSME1Q06323 249 aa7.74□□□□□ -1.17
PABPC1-223ENST00000523636 TJAP1Q5JTD0 557 aa7.74□□□□□ -1.17
PABPC1-223ENST00000523636 MARCH10Q8NA82 808 aaPredicted RBP7.74□□□□□ -1.17
PABPC1-223ENST00000523636 SLC16A10Q8TF71 515 aa7.74□□□□□ -1.17
PABPC1-223ENST00000523636 SPSB2Q99619 263 aa7.74□□□□□ -1.17
PABPC1-223ENST00000523636 IL21Q9HBE4 155 aa7.74□□□□□ -1.17
PABPC1-223ENST00000523636 HCSTQ9UBK5 93 aa7.74□□□□□ -1.17
PABPC1-223ENST00000523636 BTAF1O14981 1849 aa7.73□□□□□ -1.17
PABPC1-223ENST00000523636 SPTBN5Q9NRC6 3674 aaKnown RBP7.73□□□□□ -1.17
PABPC1-223ENST00000523636 BRCA2P51587 3418 aa7.73□□□□□ -1.17
PABPC1-223ENST00000523636 C10orf71Q711Q0 1435 aa7.73□□□□□ -1.17
PABPC1-223ENST00000523636 CCDC85CA6NKD9 419 aa7.73□□□□□ -1.17
PABPC1-223ENST00000523636 JUNDP17535 347 aa7.73□□□□□ -1.17
PABPC1-223ENST00000523636 LYPD8Q6UX82 237 aa7.73□□□□□ -1.17
PABPC1-223ENST00000523636 TSC1Q92574 1164 aa7.73□□□□□ -1.17
PABPC1-223ENST00000523636 COG6Q9Y2V7 657 aa7.73□□□□□ -1.17
PABPC1-223ENST00000523636 PXDNLA1KZ92 1463 aa7.73□□□□□ -1.17
PABPC1-223ENST00000523636 PKD1L3Q7Z443 1732 aa7.72□□□□□ -1.17
PABPC1-223ENST00000523636 KIAA1551Q9HCM1 1747 aa7.72□□□□□ -1.17
PABPC1-223ENST00000523636 DAPK1P53355 1430 aa7.72□□□□□ -1.17
PABPC1-223ENST00000523636 C11orf95C9JLR9 678 aaPredicted RBP7.72□□□□□ -1.17
PABPC1-223ENST00000523636 ADH1BP00325 375 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms