RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-223ENST00000514402 ARID3CA6NKF2 412 aa8.53□□□□□ -1.04
MATR3-223ENST00000514402 WEE1P30291 646 aa8.53□□□□□ -1.04
MATR3-223ENST00000514402 SH3PXD2AQ5TCZ1 1133 aa8.53□□□□□ -1.04
MATR3-223ENST00000514402 ABHD17AQ96GS6 310 aa8.53□□□□□ -1.04
MATR3-223ENST00000514402 PHACTR1Q9C0D0 580 aa8.53□□□□□ -1.04
MATR3-223ENST00000514402 NEUROD4Q9HD90 331 aa8.53□□□□□ -1.04
MATR3-223ENST00000514402 MAP3K10Q02779 954 aa8.52□□□□□ -1.05
MATR3-223ENST00000514402 TNP2Q05952 138 aa8.52□□□□□ -1.05
MATR3-223ENST00000514402 CDCA8Q53HL2 280 aa8.52□□□□□ -1.05
MATR3-223ENST00000514402 ALDH16A1Q8IZ83 802 aa8.52□□□□□ -1.05
MATR3-223ENST00000514402 ENAMQ9NRM1 1142 aa8.52□□□□□ -1.05
MATR3-223ENST00000514402 GDF2Q9UK05 429 aaPredicted RBP8.52□□□□□ -1.05
MATR3-223ENST00000514402 EFSO43281 561 aa8.51□□□□□ -1.05
MATR3-223ENST00000514402 ARHGEF15O94989 841 aa8.51□□□□□ -1.05
MATR3-223ENST00000514402 MAPTP10636 758 aaKnown RBP8.51□□□□□ -1.05
MATR3-223ENST00000514402 BMP4P12644 408 aa8.51□□□□□ -1.05
MATR3-223ENST00000514402 AVENQ9NQS1 362 aaPredicted RBP8.51□□□□□ -1.05
MATR3-223ENST00000514402 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.51□□□□□ -1.05
MATR3-223ENST00000514402 ZMIZ1Q9ULJ6 1067 aa8.51□□□□□ -1.05
MATR3-223ENST00000514402 HCN4Q9Y3Q4 1203 aa8.51□□□□□ -1.05
MATR3-223ENST00000514402 KHNYNO15037 678 aaKnown RBP8.5□□□□□ -1.05
MATR3-223ENST00000514402 PPP1R15AO75807 674 aaPredicted RBP8.5□□□□□ -1.05
MATR3-223ENST00000514402 CELA2BP08218 269 aaPredicted RBP8.5□□□□□ -1.05
MATR3-223ENST00000514402 BCRP11274 1271 aa8.5□□□□□ -1.05
MATR3-223ENST00000514402 RTN1Q16799 776 aa8.5□□□□□ -1.05
MATR3-223ENST00000514402 LYPD4Q6UWN0 246 aa8.5□□□□□ -1.05
MATR3-223ENST00000514402 CCDC82Q8N4S0 544 aa8.5□□□□□ -1.05
MATR3-223ENST00000514402 CHMP7Q8WUX9 453 aaPredicted RBP8.5□□□□□ -1.05
MATR3-223ENST00000514402 OXCT2Q9BYC2 517 aaPredicted RBP8.5□□□□□ -1.05
MATR3-223ENST00000514402 DCDC2BA2VCK2 349 aa8.49□□□□□ -1.05
MATR3-223ENST00000514402 GOLGA6L1Q8N7Z2 621 aa8.49□□□□□ -1.05
MATR3-223ENST00000514402 WHAMMQ8TF30 809 aa8.49□□□□□ -1.05
MATR3-223ENST00000514402 KLRG1Q96E93 195 aa8.49□□□□□ -1.05
MATR3-223ENST00000514402 ARAFP10398 606 aa8.48□□□□□ -1.05
MATR3-223ENST00000514402 IER5Q5VY09 327 aa8.48□□□□□ -1.05
MATR3-223ENST00000514402 LRRC69Q6ZNQ3 347 aa8.48□□□□□ -1.05
MATR3-223ENST00000514402 ACDQ96AP0 544 aa8.48□□□□□ -1.05
MATR3-223ENST00000514402 MARK1Q9P0L2 795 aa8.48□□□□□ -1.05
MATR3-223ENST00000514402 RNF225M0QZC1 329 aaPredicted RBP8.47□□□□□ -1.05
MATR3-223ENST00000514402 OIP5O43482 229 aa8.47□□□□□ -1.05
MATR3-223ENST00000514402 CTBSQ01459 385 aa8.47□□□□□ -1.05
MATR3-223ENST00000514402 FAM69CQ0P6D2 419 aa8.47□□□□□ -1.05
MATR3-223ENST00000514402 VTI1AQ96AJ9 217 aa8.47□□□□□ -1.05
MATR3-223ENST00000514402 SUSD3Q96L08 255 aa8.47□□□□□ -1.05
MATR3-223ENST00000514402 ADAMTS8Q9UP79 889 aa8.47□□□□□ -1.05
MATR3-223ENST00000514402 C2CD2LO14523 706 aa8.46□□□□□ -1.06
MATR3-223ENST00000514402 KCNQ4P56696 695 aa8.46□□□□□ -1.06
MATR3-223ENST00000514402 SLCO4C1Q6ZQN7 724 aa8.46□□□□□ -1.06
MATR3-223ENST00000514402 STK32AQ8WU08 396 aa8.46□□□□□ -1.06
MATR3-223ENST00000514402 CLP1Q92989 425 aaKnown RBP8.46□□□□□ -1.06
MATR3-223ENST00000514402 COL26A1Q96A83 441 aa8.46□□□□□ -1.06
MATR3-223ENST00000514402 MYO19Q96H55 970 aa8.46□□□□□ -1.06
MATR3-223ENST00000514402 C1orf115Q9H7X2 142 aa8.46□□□□□ -1.06
MATR3-223ENST00000514402 TMEM164Q5U3C3 297 aa8.45□□□□□ -1.06
MATR3-223ENST00000514402 TGFBR3LH3BV60 316 aa8.44□□□□□ -1.06
MATR3-223ENST00000514402 CD33P20138 364 aa8.44□□□□□ -1.06
MATR3-223ENST00000514402 ADH6P28332 368 aa8.44□□□□□ -1.06
MATR3-223ENST00000514402 TYRO3Q06418 890 aa8.44□□□□□ -1.06
MATR3-223ENST00000514402 OCLNQ16625 522 aa8.44□□□□□ -1.06
MATR3-223ENST00000514402 ZNF468Q5VIY5 522 aaPredicted RBP8.44□□□□□ -1.06
MATR3-223ENST00000514402 NGLY1Q96IV0 654 aa8.44□□□□□ -1.06
MATR3-223ENST00000514402 HSH2DQ96JZ2 352 aa8.44□□□□□ -1.06
MATR3-223ENST00000514402 EFCC1Q9HA90 598 aa8.44□□□□□ -1.06
MATR3-223ENST00000514402 BRD7Q9NPI1 651 aa8.44□□□□□ -1.06
MATR3-223ENST00000514402 BTLAQ7Z6A9 289 aa8.43□□□□□ -1.06
MATR3-223ENST00000514402 SCARF2Q96GP6 870 aaPredicted RBP8.43□□□□□ -1.06
MATR3-223ENST00000514402 CEP63Q96MT8 703 aa8.43□□□□□ -1.06
MATR3-223ENST00000514402 HCN2Q9UL51 889 aa8.43□□□□□ -1.06
MATR3-223ENST00000514402 PTCD1O75127 700 aaKnown RBP8.42□□□□□ -1.06
MATR3-223ENST00000514402 LGR5O75473 907 aa8.42□□□□□ -1.06
MATR3-223ENST00000514402 MARSP56192 900 aaKnown RBP8.42□□□□□ -1.06
MATR3-223ENST00000514402 FKBP5Q13451 457 aaPredicted RBP8.42□□□□□ -1.06
MATR3-223ENST00000514402 ZNF280CQ8ND82 737 aa8.42□□□□□ -1.06
MATR3-223ENST00000514402 QTRT2Q9H974 415 aaKnown RBP8.42□□□□□ -1.06
MATR3-223ENST00000514402 C11orf16Q9NQ32 467 aa8.42□□□□□ -1.06
MATR3-223ENST00000514402 STRN4Q9NRL3 753 aa8.42□□□□□ -1.06
MATR3-223ENST00000514402 CXXC1Q9P0U4 656 aaPredicted RBP8.42□□□□□ -1.06
MATR3-223ENST00000514402 GGA1Q9UJY5 639 aa8.42□□□□□ -1.06
MATR3-223ENST00000514402 PRR12Q9ULL5 1215 aa8.42□□□□□ -1.06
MATR3-223ENST00000514402 PRMT3O60678 531 aa8.41□□□□□ -1.06
MATR3-223ENST00000514402 KCNMA1Q12791 1236 aa8.41□□□□□ -1.06
MATR3-223ENST00000514402 NEUROD1Q13562 356 aa8.41□□□□□ -1.06
MATR3-223ENST00000514402 C11orf91Q3C1V1 193 aa8.41□□□□□ -1.06
MATR3-223ENST00000514402 GALNT6Q8NCL4 622 aa8.41□□□□□ -1.06
MATR3-223ENST00000514402 NEDD1Q8NHV4 660 aa8.41□□□□□ -1.06
MATR3-223ENST00000514402 EDARADDQ8WWZ3 215 aa8.41□□□□□ -1.06
MATR3-223ENST00000514402 KCNH4Q9UQ05 1017 aa8.41□□□□□ -1.06
MATR3-223ENST00000514402 EPXP11678 715 aa8.4□□□□□ -1.06
MATR3-223ENST00000514402 EPB42P16452 691 aa8.4□□□□□ -1.06
MATR3-223ENST00000514402 PRIMPOLQ96LW4 560 aa8.4□□□□□ -1.06
MATR3-223ENST00000514402 DNMT3AQ9Y6K1 912 aaPredicted RBP8.4□□□□□ -1.06
MATR3-223ENST00000514402 SIN3BO75182 1162 aa8.39□□□□□ -1.07
MATR3-223ENST00000514402 SFSWAPQ12872 951 aaKnown RBP8.39□□□□□ -1.07
MATR3-223ENST00000514402 PODNQ7Z5L7 613 aa8.39□□□□□ -1.07
MATR3-223ENST00000514402 DMGDHQ9UI17 866 aaKnown RBP8.39□□□□□ -1.07
MATR3-223ENST00000514402 NEURL1BA8MQ27 555 aa8.38□□□□□ -1.07
MATR3-223ENST00000514402 PHF20L1A8MW92 1017 aa8.38□□□□□ -1.07
MATR3-223ENST00000514402 SPEM2Q0P670 501 aa8.38□□□□□ -1.07
MATR3-223ENST00000514402 DGKZQ13574 1117 aa8.38□□□□□ -1.07
MATR3-223ENST00000514402 KANK3Q6NY19 840 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms