RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 PSME1Q06323 249 aa6.91□□□□□ -1.3
PSPC1-205ENST00000497722 FIGNL1Q6PIW4 674 aa6.91□□□□□ -1.3
PSPC1-205ENST00000497722 SLC9A9Q8IVB4 645 aa6.91□□□□□ -1.3
PSPC1-205ENST00000497722 L3MBTL2Q969R5 705 aa6.91□□□□□ -1.3
PSPC1-205ENST00000497722 AIDAQ96BJ3 306 aa6.91□□□□□ -1.3
PSPC1-205ENST00000497722 PARP3Q9Y6F1 533 aa6.91□□□□□ -1.3
PSPC1-205ENST00000497722 PALM3A6NDB9 673 aaPredicted RBP6.9□□□□□ -1.3
PSPC1-205ENST00000497722 HOXB4P17483 251 aaPredicted RBP6.9□□□□□ -1.3
PSPC1-205ENST00000497722 NOS2P35228 1153 aa6.9□□□□□ -1.3
PSPC1-205ENST00000497722 DOC2BQ14184 412 aa6.9□□□□□ -1.3
PSPC1-205ENST00000497722 NBPF1Q3BBV0 1214 aa6.9□□□□□ -1.3
PSPC1-205ENST00000497722 FAM182BQ5T319 152 aa6.9□□□□□ -1.3
PSPC1-205ENST00000497722 SH3PXD2AQ5TCZ1 1133 aa6.9□□□□□ -1.3
PSPC1-205ENST00000497722 SAMD5Q5TGI4 173 aa6.9□□□□□ -1.3
PSPC1-205ENST00000497722 LINC00114Q6XXX2 140 aa6.9□□□□□ -1.3
PSPC1-205ENST00000497722 ZFP64Q9NPA5 681 aa6.9□□□□□ -1.3
PSPC1-205ENST00000497722 ATXN7O15265 892 aaPredicted RBP6.89□□□□□ -1.31
PSPC1-205ENST00000497722 EFSO43281 561 aa6.89□□□□□ -1.31
PSPC1-205ENST00000497722 FAM157BP0CG42 384 aa6.89□□□□□ -1.31
PSPC1-205ENST00000497722 MAPTP10636 758 aaKnown RBP6.89□□□□□ -1.31
PSPC1-205ENST00000497722 HIRAP54198 1017 aaPredicted RBP6.89□□□□□ -1.31
PSPC1-205ENST00000497722 TBCELQ5QJ74 424 aa6.89□□□□□ -1.31
PSPC1-205ENST00000497722 KANK4Q5T7N3 995 aaPredicted RBP6.89□□□□□ -1.31
PSPC1-205ENST00000497722 PPP1R12CQ9BZL4 782 aa6.89□□□□□ -1.31
PSPC1-205ENST00000497722 C21orf2O43822 256 aa6.88□□□□□ -1.31
PSPC1-205ENST00000497722 TATP17735 454 aaPredicted RBP6.88□□□□□ -1.31
PSPC1-205ENST00000497722 ARTNQ5T4W7 220 aa6.88□□□□□ -1.31
PSPC1-205ENST00000497722 NBPF11Q86T75 865 aa6.88□□□□□ -1.31
PSPC1-205ENST00000497722 TSPAN10Q9H1Z9 355 aaPredicted RBP6.88□□□□□ -1.31
PSPC1-205ENST00000497722 KLF15Q9UIH9 416 aa6.88□□□□□ -1.31
PSPC1-205ENST00000497722 SFI1A8K8P3 1242 aa6.87□□□□□ -1.31
PSPC1-205ENST00000497722 ARAFP10398 606 aa6.87□□□□□ -1.31
PSPC1-205ENST00000497722 BMP4P12644 408 aa6.87□□□□□ -1.31
PSPC1-205ENST00000497722 ARSJQ5FYB0 599 aaPredicted RBP6.87□□□□□ -1.31
PSPC1-205ENST00000497722 SLCO4C1Q6ZQN7 724 aa6.87□□□□□ -1.31
PSPC1-205ENST00000497722 KRTAP19-1Q8IUB9 90 aa6.87□□□□□ -1.31
PSPC1-205ENST00000497722 GOLGA2P5Q9HBQ8 144 aa6.87□□□□□ -1.31
PSPC1-205ENST00000497722 STRN4Q9NRL3 753 aa6.87□□□□□ -1.31
PSPC1-205ENST00000497722 GPC6Q9Y625 555 aaPredicted RBP6.87□□□□□ -1.31
PSPC1-205ENST00000497722 SERTM1A2A2V5 107 aa6.86□□□□□ -1.31
PSPC1-205ENST00000497722 PSMA6P60900 246 aaKnown RBP6.86□□□□□ -1.31
PSPC1-205ENST00000497722 PTK7Q13308 1070 aa6.86□□□□□ -1.31
PSPC1-205ENST00000497722 TSEN2Q8NCE0 465 aaKnown RBP6.86□□□□□ -1.31
PSPC1-205ENST00000497722 ZNF594Q96JF6 807 aaPredicted RBP6.86□□□□□ -1.31
PSPC1-205ENST00000497722 CALR3Q96L12 384 aaKnown RBP6.86□□□□□ -1.31
PSPC1-205ENST00000497722 GGA1Q9UJY5 639 aa6.86□□□□□ -1.31
PSPC1-205ENST00000497722 DCDC2BA2VCK2 349 aa6.85□□□□□ -1.31
PSPC1-205ENST00000497722 RASA1P20936 1047 aa6.85□□□□□ -1.31
PSPC1-205ENST00000497722 GATA4P43694 442 aa6.85□□□□□ -1.31
PSPC1-205ENST00000497722 LAMC2Q13753 1193 aa6.85□□□□□ -1.31
PSPC1-205ENST00000497722 CRTC2Q53ET0 693 aaPredicted RBP6.85□□□□□ -1.31
PSPC1-205ENST00000497722 C1orf53Q5VUE5 145 aa6.85□□□□□ -1.31
PSPC1-205ENST00000497722 STAG2Q8N3U4 1231 aa6.85□□□□□ -1.31
PSPC1-205ENST00000497722 MDFIQ99750 246 aa6.85□□□□□ -1.31
PSPC1-205ENST00000497722 EPXP11678 715 aa6.84□□□□□ -1.31
PSPC1-205ENST00000497722 CD33P20138 364 aa6.84□□□□□ -1.31
PSPC1-205ENST00000497722 DGKGP49619 791 aa6.84□□□□□ -1.31
PSPC1-205ENST00000497722 FOXD4L6Q3SYB3 417 aaPredicted RBP6.84□□□□□ -1.31
PSPC1-205ENST00000497722 CFAP70Q5T0N1 1121 aa6.84□□□□□ -1.31
PSPC1-205ENST00000497722 FOXD4L3Q6VB84 417 aaPredicted RBP6.84□□□□□ -1.31
PSPC1-205ENST00000497722 AVENQ9NQS1 362 aaPredicted RBP6.84□□□□□ -1.31
PSPC1-205ENST00000497722 KHNYNO15037 678 aaKnown RBP6.83□□□□□ -1.32
PSPC1-205ENST00000497722 SEC13P55735 322 aa6.83□□□□□ -1.32
PSPC1-205ENST00000497722 BICDL1Q6ZP65 573 aa6.83□□□□□ -1.32
PSPC1-205ENST00000497722 FCHSD1Q86WN1 690 aa6.83□□□□□ -1.32
PSPC1-205ENST00000497722 ARXQ96QS3 562 aa6.83□□□□□ -1.32
PSPC1-205ENST00000497722 C2orf49Q9BVC5 232 aaPredicted RBP6.83□□□□□ -1.32
PSPC1-205ENST00000497722 ZNF232Q9UNY5 417 aa6.83□□□□□ -1.32
PSPC1-205ENST00000497722 FAM196BA6NMK8 535 aa6.82□□□□□ -1.32
PSPC1-205ENST00000497722 NEURL1BA8MQ27 555 aa6.82□□□□□ -1.32
PSPC1-205ENST00000497722 ZNF468Q5VIY5 522 aaPredicted RBP6.82□□□□□ -1.32
PSPC1-205ENST00000497722 LRRC69Q6ZNQ3 347 aa6.82□□□□□ -1.32
PSPC1-205ENST00000497722 GAS2L2Q8NHY3 880 aa6.82□□□□□ -1.32
PSPC1-205ENST00000497722 BTBD6Q96KE9 485 aa6.82□□□□□ -1.32
PSPC1-205ENST00000497722 MARK1Q9P0L2 795 aa6.82□□□□□ -1.32
PSPC1-205ENST00000497722 ATAD2Q6PL18 1390 aa6.82□□□□□ -1.32
PSPC1-205ENST00000497722 DPYDQ12882 1025 aa6.81□□□□□ -1.32
PSPC1-205ENST00000497722 RSPO4Q2I0M5 234 aaPredicted RBP6.81□□□□□ -1.32
PSPC1-205ENST00000497722 PHACTR1Q9C0D0 580 aa6.81□□□□□ -1.32
PSPC1-205ENST00000497722 HCN4Q9Y3Q4 1203 aa6.81□□□□□ -1.32
PSPC1-205ENST00000497722 USP17L15C9J2P7 530 aa6.8□□□□□ -1.32
PSPC1-205ENST00000497722 USP17L10C9JJH3 530 aa6.8□□□□□ -1.32
PSPC1-205ENST00000497722 USP17L13C9JLJ4 530 aa6.8□□□□□ -1.32
PSPC1-205ENST00000497722 USP17L12C9JPN9 530 aa6.8□□□□□ -1.32
PSPC1-205ENST00000497722 USP17L11C9JVI0 530 aa6.8□□□□□ -1.32
PSPC1-205ENST00000497722 USP17L21D6R901 530 aa6.8□□□□□ -1.32
PSPC1-205ENST00000497722 USP17L18D6R9N7 530 aa6.8□□□□□ -1.32
PSPC1-205ENST00000497722 USP17L22D6RA61 530 aa6.8□□□□□ -1.32
PSPC1-205ENST00000497722 USP17L17D6RBQ6 530 aa6.8□□□□□ -1.32
PSPC1-205ENST00000497722 USP17L19D6RCP7 530 aa6.8□□□□□ -1.32
PSPC1-205ENST00000497722 USP17L20D6RJB6 530 aa6.8□□□□□ -1.32
PSPC1-205ENST00000497722 PPP1R12BO60237 982 aaPredicted RBP6.8□□□□□ -1.32
PSPC1-205ENST00000497722 ADH6P28332 368 aa6.8□□□□□ -1.32
PSPC1-205ENST00000497722 LMOD1P29536 600 aaPredicted RBP6.8□□□□□ -1.32
PSPC1-205ENST00000497722 KCNQ4P56696 695 aa6.8□□□□□ -1.32
PSPC1-205ENST00000497722 USP17L24Q0WX57 530 aa6.8□□□□□ -1.32
PSPC1-205ENST00000497722 LARP1Q6PKG0 1096 aaKnown RBP6.8□□□□□ -1.32
PSPC1-205ENST00000497722 ANKMY2Q8IV38 441 aa6.8□□□□□ -1.32
PSPC1-205ENST00000497722 ZNF280CQ8ND82 737 aa6.8□□□□□ -1.32
PSPC1-205ENST00000497722 RHPN1Q8TCX5 695 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms