RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 WASLO00401 505 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P8-201ENST00000449709 FAM13AO94988 1023 aa4.67□□□□□ -1.66
HMGB3P8-201ENST00000449709 KIF20AO95235 890 aa4.67□□□□□ -1.66
HMGB3P8-201ENST00000449709 LORP23490 312 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P8-201ENST00000449709 EPHA4P54764 986 aa4.67□□□□□ -1.66
HMGB3P8-201ENST00000449709 ERVK-9P63128 1117 aa4.67□□□□□ -1.66
HMGB3P8-201ENST00000449709 SCARF1Q14162 830 aa4.67□□□□□ -1.66
HMGB3P8-201ENST00000449709 MRPL58Q14197 206 aaKnown RBP4.67□□□□□ -1.66
HMGB3P8-201ENST00000449709 INTS6LQ5JSJ4 861 aaKnown RBP4.67□□□□□ -1.66
HMGB3P8-201ENST00000449709 C6orf118Q5T5N4 469 aa4.67□□□□□ -1.66
HMGB3P8-201ENST00000449709 SCG3Q8WXD2 468 aaKnown RBP4.67□□□□□ -1.66
HMGB3P8-201ENST00000449709 IRF7Q92985 503 aa4.67□□□□□ -1.66
HMGB3P8-201ENST00000449709 ZNF830Q96NB3 372 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P8-201ENST00000449709 MAP4K5Q9Y4K4 846 aa4.67□□□□□ -1.66
HMGB3P8-201ENST00000449709 ATAD2Q6PL18 1390 aa4.66□□□□□ -1.66
HMGB3P8-201ENST00000449709 BACH1O14867 736 aa4.66□□□□□ -1.66
HMGB3P8-201ENST00000449709 P4HBP07237 508 aaKnown RBP4.66□□□□□ -1.66
HMGB3P8-201ENST00000449709 MPSTP25325 297 aa4.66□□□□□ -1.66
HMGB3P8-201ENST00000449709 RAB15P59190 212 aa4.66□□□□□ -1.66
HMGB3P8-201ENST00000449709 ZC3H6P61129 1189 aaKnown RBP4.66□□□□□ -1.66
HMGB3P8-201ENST00000449709 NR5A1Q13285 461 aa4.66□□□□□ -1.66
HMGB3P8-201ENST00000449709 CC2D2BQ6DHV5 1058 aa4.66□□□□□ -1.66
HMGB3P8-201ENST00000449709 NPAS3Q8IXF0 933 aa4.66□□□□□ -1.66
HMGB3P8-201ENST00000449709 TNS4Q8IZW8 715 aa4.66□□□□□ -1.66
HMGB3P8-201ENST00000449709 DRC1Q96MC2 740 aa4.66□□□□□ -1.66
HMGB3P8-201ENST00000449709 BACH2Q9BYV9 841 aa4.66□□□□□ -1.66
HMGB3P8-201ENST00000449709 PNNQ9H307 717 aaKnown RBP4.66□□□□□ -1.66
HMGB3P8-201ENST00000449709 OSBPL3Q9H4L5 887 aa4.66□□□□□ -1.66
HMGB3P8-201ENST00000449709 RB1CC1Q8TDY2 1594 aa4.65□□□□□ -1.66
HMGB3P8-201ENST00000449709 TREHO43280 583 aa4.65□□□□□ -1.67
HMGB3P8-201ENST00000449709 STAU1O95793 577 aaKnown RBP4.65□□□□□ -1.67
HMGB3P8-201ENST00000449709 INHAP05111 366 aa4.65□□□□□ -1.67
HMGB3P8-201ENST00000449709 GDF10P55107 478 aa4.65□□□□□ -1.67
HMGB3P8-201ENST00000449709 FMR1Q06787 632 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB3P8-201ENST00000449709 DSC3Q14574 896 aa4.65□□□□□ -1.67
HMGB3P8-201ENST00000449709 TSNAXIP1Q2TAA8 658 aa4.65□□□□□ -1.67
HMGB3P8-201ENST00000449709 TAF3Q5VWG9 929 aa4.65□□□□□ -1.67
HMGB3P8-201ENST00000449709 SREK1Q8WXA9 508 aaKnown RBP4.65□□□□□ -1.67
HMGB3P8-201ENST00000449709 SLC4A9Q96Q91 983 aa4.65□□□□□ -1.67
HMGB3P8-201ENST00000449709 CITED4Q96RK1 184 aa4.65□□□□□ -1.67
HMGB3P8-201ENST00000449709 SAP130Q9H0E3 1048 aa4.65□□□□□ -1.67
HMGB3P8-201ENST00000449709 TSPAN10Q9H1Z9 355 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P8-201ENST00000449709 CFAP65Q6ZU64 1925 aaKnown RBP4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 A0A1W2PRU2 124 aa4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 FSD2A1L4K1 749 aa4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 NDUFB5O43674 189 aa4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 IGHA2P01877 340 aa4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 BMP2P12643 396 aa4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 FSHRP23945 695 aa4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 FOXK2Q01167 660 aa4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 NFKBIBQ15653 356 aa4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 LDLRAD1Q5T700 205 aa4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 C16orf46Q6P387 395 aa4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 VASH1Q7L8A9 365 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 MTERF4Q7Z6M4 381 aaKnown RBP4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 STAG2Q8N3U4 1231 aa4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 ZSCAN1Q8NBB4 408 aa4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 ETNK1Q9HBU6 452 aa4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 TNIKQ9UKE5 1360 aa4.64□□□□□ -1.67
HMGB3P8-201ENST00000449709 CEP162Q5TB80 1403 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 TNFRSF10BO14763 440 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 FZD6O60353 706 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 MAN1A2O60476 641 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 ZSCAN20P17040 1043 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 EIF1AXP47813 144 aaKnown RBP4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 NAALADL2Q58DX5 795 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 TICAM2Q86XR7 235 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 LINC00528Q8N1L1 170 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 MEIOBQ8N635 442 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 CHMP7Q8WUX9 453 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 ANP32BQ92688 251 aaKnown RBP4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 VTI1AQ96AJ9 217 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 FAM129BQ96TA1 746 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 ESF1Q9H501 851 aaKnown RBP4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 YY1AP1Q9H869 796 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 TMPRSS4Q9NRS4 437 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 CCDC87Q9NVE4 849 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 SERTAD1Q9UHV2 236 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 KCNG1Q9UIX4 513 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 SCRIBQ14160 1630 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 ZBED9Q6R2W3 1325 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 PHLDB1Q86UU1 1377 aa4.63□□□□□ -1.67
HMGB3P8-201ENST00000449709 MAPKBP1O60336 1514 aa4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 GOLGA6L3A6NEY3 463 aa4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 SCAMP3O14828 347 aaKnown RBP4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 CLGNO14967 610 aa4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 PPP1R12BO60237 982 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 CDK11BP21127 795 aaKnown RBP4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 ERCC5P28715 1186 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 HDLBPQ00341 1268 aaKnown RBP4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 PLCB3Q01970 1234 aa4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 DHX9Q08211 1270 aaKnown RBP4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 EHHADHQ08426 723 aa4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 MTFR1Q15390 333 aa4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 COX20Q5RI15 118 aa4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 AXDND1Q5T1B0 1012 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 L1TD1Q5T7N2 865 aaKnown RBP4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 ALKBH2Q6NS38 261 aa4.62□□□□□ -1.67
HMGB3P8-201ENST00000449709 TRIM52Q96A61 297 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms